RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 AATKQ6ZMQ8 1374 aa21.22■□□□□ 0.99
USP5-207ENST00000542371 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
USP5-207ENST00000542371 COG3Q96JB2 828 aa21.21■□□□□ 0.99
USP5-207ENST00000542371 SHPRHQ149N8 1683 aa21.21■□□□□ 0.99
USP5-207ENST00000542371 NME9Q86XW9 330 aa21.2■□□□□ 0.98
USP5-207ENST00000542371 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
USP5-207ENST00000542371 NGEFQ8N5V2 710 aa21.18■□□□□ 0.98
USP5-207ENST00000542371 PMFBP1Q8TBY8 1022 aa21.18■□□□□ 0.98
USP5-207ENST00000542371 PNPLA6Q8IY17 1366 aa21.18■□□□□ 0.98
USP5-207ENST00000542371 PDE3BQ13370 1112 aa21.17■□□□□ 0.98
USP5-207ENST00000542371 C19orf44Q9H6X5 657 aa21.17■□□□□ 0.98
USP5-207ENST00000542371 PHF8Q9UPP1 1060 aa21.17■□□□□ 0.98
USP5-207ENST00000542371 DCCP43146 1447 aa21.17■□□□□ 0.98
USP5-207ENST00000542371 SMG6Q86US8 1419 aaKnown RBP21.17■□□□□ 0.98
USP5-207ENST00000542371 STRCP1A6NGW2 1772 aa21.17■□□□□ 0.98
USP5-207ENST00000542371 COL3A1P02461 1466 aaPredicted RBP21.16■□□□□ 0.98
USP5-207ENST00000542371 OVOS2A0A0J9YW53 1432 aa21.16■□□□□ 0.98
USP5-207ENST00000542371 OVOS2Q6IE36 1432 aa21.16■□□□□ 0.98
USP5-207ENST00000542371 USP31Q70CQ4 1352 aa21.16■□□□□ 0.98
USP5-207ENST00000542371 GTF3C3Q9Y5Q9 886 aa21.16■□□□□ 0.98
USP5-207ENST00000542371 NUDCQ9Y266 331 aa21.15■□□□□ 0.98
USP5-207ENST00000542371 RBM33Q96EV2 1170 aaKnown RBP21.13■□□□□ 0.97
USP5-207ENST00000542371 POLKQ9UBT6 870 aa21.13■□□□□ 0.97
USP5-207ENST00000542371 MAP2P11137 1827 aaKnown RBP21.13■□□□□ 0.97
USP5-207ENST00000542371 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
USP5-207ENST00000542371 USP54Q70EL1 1684 aa21.12■□□□□ 0.97
USP5-207ENST00000542371 LRRC7Q96NW7 1537 aa21.12■□□□□ 0.97
USP5-207ENST00000542371 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
USP5-207ENST00000542371 DMRT2Q9Y5R5 561 aa21.11■□□□□ 0.97
USP5-207ENST00000542371 CDK12Q9NYV4 1490 aaPredicted RBP21.11■□□□□ 0.97
USP5-207ENST00000542371 KIF1AQ12756 1690 aa21.1■□□□□ 0.97
USP5-207ENST00000542371 DIAPH1O60610 1272 aaKnown RBP21.1■□□□□ 0.97
USP5-207ENST00000542371 NCBP3Q53F19 620 aaKnown RBP21.1■□□□□ 0.97
USP5-207ENST00000542371 ESCO1Q5FWF5 840 aa21.09■□□□□ 0.97
USP5-207ENST00000542371 RUNDC1Q96C34 613 aa21.09■□□□□ 0.97
USP5-207ENST00000542371 C1orf167Q5SNV9 1468 aa21.08■□□□□ 0.97
USP5-207ENST00000542371 ATF3P18847 181 aa21.08■□□□□ 0.97
USP5-207ENST00000542371 PIK3C2AO00443 1686 aa21.08■□□□□ 0.96
USP5-207ENST00000542371 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
USP5-207ENST00000542371 CADPS2Q86UW7 1296 aa21.06■□□□□ 0.96
USP5-207ENST00000542371 U2AF1L5P0DN76 240 aaPredicted RBP21.05■□□□□ 0.96
USP5-207ENST00000542371 U2AF1Q01081 240 aaKnown RBP eCLIP21.05■□□□□ 0.96
USP5-207ENST00000542371 MSH6P52701 1360 aa21.05■□□□□ 0.96
USP5-207ENST00000542371 MST1RQ04912 1400 aa21.04■□□□□ 0.96
USP5-207ENST00000542371 PSME1Q06323 249 aa21.04■□□□□ 0.96
USP5-207ENST00000542371 CCDC146Q8IYE0 955 aa21.04■□□□□ 0.96
USP5-207ENST00000542371 ZNF521Q96K83 1311 aa21.04■□□□□ 0.96
USP5-207ENST00000542371 APAF1O14727 1248 aa21.03■□□□□ 0.96
USP5-207ENST00000542371 EMILIN1Q9Y6C2 1016 aa21.03■□□□□ 0.96
USP5-207ENST00000542371 XIRP1Q702N8 1843 aaKnown RBP21.02■□□□□ 0.96
USP5-207ENST00000542371 IQSEC2Q5JU85 1478 aa21.01■□□□□ 0.95
USP5-207ENST00000542371 KIF24Q5T7B8 1368 aa21.01■□□□□ 0.95
USP5-207ENST00000542371 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
USP5-207ENST00000542371 PPM1GO15355 546 aaPredicted RBP21.01■□□□□ 0.95
USP5-207ENST00000542371 NLRP6P59044 892 aa21.01■□□□□ 0.95
USP5-207ENST00000542371 ABTB2Q8N961 1025 aa21.01■□□□□ 0.95
USP5-207ENST00000542371 ORAI2Q96SN7 254 aa21.01■□□□□ 0.95
USP5-207ENST00000542371 SALL2Q9Y467 1007 aaPredicted RBP21.01■□□□□ 0.95
USP5-207ENST00000542371 FCHSD2O94868 740 aa21■□□□□ 0.95
USP5-207ENST00000542371 FBLN1P23142 703 aa21■□□□□ 0.95
USP5-207ENST00000542371 IL13P35225 146 aa21■□□□□ 0.95
USP5-207ENST00000542371 MARF1Q9Y4F3 1742 aaKnown RBP21■□□□□ 0.95
USP5-207ENST00000542371 RRS1Q15050 365 aaKnown RBP20.99■□□□□ 0.95
USP5-207ENST00000542371 SENP3-EIF4A1A0A087X0R7 540 aa20.98■□□□□ 0.95
USP5-207ENST00000542371 PAK3O75914 559 aaPredicted RBP20.98■□□□□ 0.95
USP5-207ENST00000542371 NEFLP07196 543 aa20.98■□□□□ 0.95
USP5-207ENST00000542371 CCDC27Q2M243 656 aa20.98■□□□□ 0.95
USP5-207ENST00000542371 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
USP5-207ENST00000542371 SBNO1A3KN83 1393 aa20.97■□□□□ 0.95
USP5-207ENST00000542371 GOLGA2Q08379 1002 aa20.97■□□□□ 0.95
USP5-207ENST00000542371 TCP11L2Q8N4U5 519 aa20.97■□□□□ 0.95
USP5-207ENST00000542371 PLEKHF1Q96S99 279 aa20.97■□□□□ 0.95
USP5-207ENST00000542371 TRPM3Q9HCF6 1732 aaPredicted RBP20.97■□□□□ 0.95
USP5-207ENST00000542371 SUPT16HQ9Y5B9 1047 aaKnown RBP20.96■□□□□ 0.95
USP5-207ENST00000542371 FOXO3O43524 673 aa20.95■□□□□ 0.94
USP5-207ENST00000542371 KRT28Q7Z3Y7 464 aa20.95■□□□□ 0.94
USP5-207ENST00000542371 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
USP5-207ENST00000542371 FLT4P35916 1363 aa20.95■□□□□ 0.94
USP5-207ENST00000542371 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
USP5-207ENST00000542371 KCNH5Q8NCM2 988 aa20.94■□□□□ 0.94
USP5-207ENST00000542371 MAP3K19Q56UN5 1328 aa20.94■□□□□ 0.94
USP5-207ENST00000542371 MAPK8IP3Q9UPT6 1336 aa20.94■□□□□ 0.94
USP5-207ENST00000542371 NEFMP07197 916 aa20.92■□□□□ 0.94
USP5-207ENST00000542371 WDR63Q8IWG1 891 aa20.92■□□□□ 0.94
USP5-207ENST00000542371 CDCA7LQ96GN5 454 aa20.92■□□□□ 0.94
USP5-207ENST00000542371 RSPH6AQ9H0K4 717 aa20.92■□□□□ 0.94
USP5-207ENST00000542371 RTL1A6NKG5 1358 aa20.92■□□□□ 0.94
USP5-207ENST00000542371 E9PSI1 815 aa20.91■□□□□ 0.94
USP5-207ENST00000542371 SLIT3O75094 1523 aa20.91■□□□□ 0.94
USP5-207ENST00000542371 SLFN5Q08AF3 891 aa20.91■□□□□ 0.94
USP5-207ENST00000542371 NPHP3Q7Z494 1330 aa20.91■□□□□ 0.94
USP5-207ENST00000542371 WWC1Q8IX03 1113 aa20.91■□□□□ 0.94
USP5-207ENST00000542371 TRMT2AQ8IZ69 625 aaKnown RBP20.91■□□□□ 0.94
USP5-207ENST00000542371 RNF123Q5XPI4 1314 aa20.9■□□□□ 0.94
USP5-207ENST00000542371 AMPHP49418 695 aa20.9■□□□□ 0.94
USP5-207ENST00000542371 EIF4A2Q14240 407 aaKnown RBP20.9■□□□□ 0.94
USP5-207ENST00000542371 NFAT5O94916 1531 aa20.89■□□□□ 0.94
USP5-207ENST00000542371 TMPOP42166 694 aaKnown RBP20.89■□□□□ 0.93
USP5-207ENST00000542371 RGPD1P0DJD0 1748 aa20.89■□□□□ 0.93
USP5-207ENST00000542371 ALS2Q96Q42 1657 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms