RNA–Protein interactions for RNA: ENST00000542296.6

CERS1-202, Transcript of ceramide synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CERS1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS1-202ENST00000542296 NCOA3Q9Y6Q9 1424 aa27.7■■■□□ 2.03
CERS1-202ENST00000542296 NME9Q86XW9 330 aa27.69■■■□□ 2.02
CERS1-202ENST00000542296 RBM33Q96EV2 1170 aaKnown RBP27.69■■■□□ 2.02
CERS1-202ENST00000542296 PROSER2Q86WR7 435 aaPredicted RBP27.68■■■□□ 2.02
CERS1-202ENST00000542296 CFAP53Q96M91 514 aa27.67■■■□□ 2.02
CERS1-202ENST00000542296 AATKQ6ZMQ8 1374 aa27.67■■■□□ 2.02
CERS1-202ENST00000542296 PMFBP1Q8TBY8 1022 aa27.67■■■□□ 2.02
CERS1-202ENST00000542296 PNPLA6Q8IY17 1366 aa27.66■■■□□ 2.02
CERS1-202ENST00000542296 TTC21AQ8NDW8 1320 aa27.66■■■□□ 2.02
CERS1-202ENST00000542296 NEFLP07196 543 aa27.66■■■□□ 2.02
CERS1-202ENST00000542296 MAP2P11137 1827 aaKnown RBP27.66■■■□□ 2.02
CERS1-202ENST00000542296 COL3A1P02461 1466 aaPredicted RBP27.65■■■□□ 2.02
CERS1-202ENST00000542296 NGDNQ8NEJ9 315 aaKnown RBP27.65■■■□□ 2.02
CERS1-202ENST00000542296 OVOS2A0A0J9YW53 1432 aa27.64■■■□□ 2.02
CERS1-202ENST00000542296 OVOS2Q6IE36 1432 aa27.64■■■□□ 2.02
CERS1-202ENST00000542296 SMG6Q86US8 1419 aaKnown RBP27.63■■■□□ 2.01
CERS1-202ENST00000542296 COG3Q96JB2 828 aa27.63■■■□□ 2.01
CERS1-202ENST00000542296 C19orf44Q9H6X5 657 aa27.63■■■□□ 2.01
CERS1-202ENST00000542296 DCCP43146 1447 aa27.62■■■□□ 2.01
CERS1-202ENST00000542296 C14orf37Q86TY3 774 aa27.61■■■□□ 2.01
CERS1-202ENST00000542296 ZRANB1Q9UGI0 708 aa27.61■■■□□ 2.01
CERS1-202ENST00000542296 PHF8Q9UPP1 1060 aa27.61■■■□□ 2.01
CERS1-202ENST00000542296 POLKQ9UBT6 870 aa27.6■■■□□ 2.01
CERS1-202ENST00000542296 USP54Q70EL1 1684 aa27.6■■■□□ 2.01
CERS1-202ENST00000542296 TMEM94Q12767 1356 aa27.59■■■□□ 2.01
CERS1-202ENST00000542296 USP31Q70CQ4 1352 aa27.59■■■□□ 2.01
CERS1-202ENST00000542296 FKBP8Q14318 412 aa27.59■■■□□ 2.01
CERS1-202ENST00000542296 PIK3C2AO00443 1686 aa27.58■■■□□ 2.01
CERS1-202ENST00000542296 XIRP1Q702N8 1843 aaKnown RBP27.56■■■□□ 2
CERS1-202ENST00000542296 CDK12Q9NYV4 1490 aaPredicted RBP27.55■■■□□ 2
CERS1-202ENST00000542296 PDE3BQ13370 1112 aa27.54■■■□□ 2
CERS1-202ENST00000542296 LRRC7Q96NW7 1537 aa27.53■■■□□ 2
CERS1-202ENST00000542296 C1orf167Q5SNV9 1468 aa27.53■■■□□ 2
CERS1-202ENST00000542296 KIF1AQ12756 1690 aa27.52■■■□□ 2
CERS1-202ENST00000542296 ESCO1Q5FWF5 840 aa27.52■■■□□ 2
CERS1-202ENST00000542296 NGEFQ8N5V2 710 aa27.52■■■□□ 2
CERS1-202ENST00000542296 MARF1Q9Y4F3 1742 aaKnown RBP27.52■■■□□ 2
CERS1-202ENST00000542296 FBLN1P23142 703 aa27.51■■■□□ 2
CERS1-202ENST00000542296 NUDCQ9Y266 331 aa27.51■■□□□ 1.99
CERS1-202ENST00000542296 MST1RQ04912 1400 aa27.5■■□□□ 1.99
CERS1-202ENST00000542296 SENP3-EIF4A1A0A087X0R7 540 aa27.49■■□□□ 1.99
CERS1-202ENST00000542296 DIAPH1O60610 1272 aaKnown RBP27.49■■□□□ 1.99
CERS1-202ENST00000542296 CCDC146Q8IYE0 955 aa27.48■■□□□ 1.99
CERS1-202ENST00000542296 EMILIN1Q9Y6C2 1016 aa27.48■■□□□ 1.99
CERS1-202ENST00000542296 ZNF521Q96K83 1311 aa27.48■■□□□ 1.99
CERS1-202ENST00000542296 ORAI2Q96SN7 254 aa27.47■■□□□ 1.99
CERS1-202ENST00000542296 ATF3P18847 181 aa27.47■■□□□ 1.99
CERS1-202ENST00000542296 RUNDC1Q96C34 613 aa27.47■■□□□ 1.99
CERS1-202ENST00000542296 DMRT2Q9Y5R5 561 aa27.47■■□□□ 1.99
CERS1-202ENST00000542296 CADPS2Q86UW7 1296 aa27.45■■□□□ 1.99
CERS1-202ENST00000542296 IQSEC2Q5JU85 1478 aa27.45■■□□□ 1.99
CERS1-202ENST00000542296 APAF1O14727 1248 aa27.45■■□□□ 1.98
CERS1-202ENST00000542296 MSH6P52701 1360 aa27.44■■□□□ 1.98
CERS1-202ENST00000542296 U2AF1L5P0DN76 240 aaPredicted RBP27.44■■□□□ 1.98
CERS1-202ENST00000542296 U2AF1Q01081 240 aaKnown RBP eCLIP27.44■■□□□ 1.98
CERS1-202ENST00000542296 RRS1Q15050 365 aaKnown RBP27.44■■□□□ 1.98
CERS1-202ENST00000542296 NCBP3Q53F19 620 aaKnown RBP27.44■■□□□ 1.98
CERS1-202ENST00000542296 SALL2Q9Y467 1007 aaPredicted RBP27.44■■□□□ 1.98
CERS1-202ENST00000542296 ZNF335Q9H4Z2 1342 aaPredicted RBP27.43■■□□□ 1.98
CERS1-202ENST00000542296 PSME1Q06323 249 aa27.43■■□□□ 1.98
CERS1-202ENST00000542296 TRPM3Q9HCF6 1732 aaPredicted RBP27.42■■□□□ 1.98
CERS1-202ENST00000542296 ERICH6BQ5W0A0 696 aa27.42■■□□□ 1.98
CERS1-202ENST00000542296 PEAK1Q9H792 1746 aa27.42■■□□□ 1.98
CERS1-202ENST00000542296 PPM1GO15355 546 aaPredicted RBP27.41■■□□□ 1.98
CERS1-202ENST00000542296 NLRP6P59044 892 aa27.41■■□□□ 1.98
CERS1-202ENST00000542296 ABTB2Q8N961 1025 aa27.41■■□□□ 1.98
CERS1-202ENST00000542296 IL13P35225 146 aa27.4■■□□□ 1.98
CERS1-202ENST00000542296 PLEKHF1Q96S99 279 aa27.39■■□□□ 1.98
CERS1-202ENST00000542296 U2SURPO15042 1029 aaKnown RBP27.39■■□□□ 1.97
CERS1-202ENST00000542296 FOXO3O43524 673 aa27.39■■□□□ 1.97
CERS1-202ENST00000542296 PAK3O75914 559 aaPredicted RBP27.37■■□□□ 1.97
CERS1-202ENST00000542296 PELP1Q8IZL8 1130 aaKnown RBP27.37■■□□□ 1.97
CERS1-202ENST00000542296 KIF24Q5T7B8 1368 aa27.37■■□□□ 1.97
CERS1-202ENST00000542296 FCHSD2O94868 740 aa27.36■■□□□ 1.97
CERS1-202ENST00000542296 TCP11L2Q8N4U5 519 aa27.36■■□□□ 1.97
CERS1-202ENST00000542296 PHF23Q9BUL5 403 aaPredicted RBP27.36■■□□□ 1.97
CERS1-202ENST00000542296 PNNQ9H307 717 aaKnown RBP27.36■■□□□ 1.97
CERS1-202ENST00000542296 SBNO1A3KN83 1393 aa27.35■■□□□ 1.97
CERS1-202ENST00000542296 MAP3K19Q56UN5 1328 aa27.35■■□□□ 1.97
CERS1-202ENST00000542296 CDCA7LQ96GN5 454 aa27.35■■□□□ 1.97
CERS1-202ENST00000542296 CCDC27Q2M243 656 aa27.34■■□□□ 1.97
CERS1-202ENST00000542296 FLT4P35916 1363 aa27.32■■□□□ 1.96
CERS1-202ENST00000542296 GOLGA2Q08379 1002 aa27.32■■□□□ 1.96
CERS1-202ENST00000542296 ALS2Q96Q42 1657 aa27.32■■□□□ 1.96
CERS1-202ENST00000542296 RGPD1P0DJD0 1748 aa27.32■■□□□ 1.96
CERS1-202ENST00000542296 NFAT5O94916 1531 aa27.32■■□□□ 1.96
CERS1-202ENST00000542296 KRT28Q7Z3Y7 464 aa27.31■■□□□ 1.96
CERS1-202ENST00000542296 RSPH6AQ9H0K4 717 aa27.31■■□□□ 1.96
CERS1-202ENST00000542296 RNF123Q5XPI4 1314 aa27.3■■□□□ 1.96
CERS1-202ENST00000542296 WWC1Q8IX03 1113 aa27.3■■□□□ 1.96
CERS1-202ENST00000542296 NUTM2GQ5VZR2 741 aa27.29■■□□□ 1.96
CERS1-202ENST00000542296 TRMT2AQ8IZ69 625 aaKnown RBP27.29■■□□□ 1.96
CERS1-202ENST00000542296 SLIT3O75094 1523 aa27.29■■□□□ 1.96
CERS1-202ENST00000542296 PHRF1Q9P1Y6 1649 aaKnown RBP27.29■■□□□ 1.96
CERS1-202ENST00000542296 EIF4A2Q14240 407 aaKnown RBP27.29■■□□□ 1.96
CERS1-202ENST00000542296 HSP90AB2PQ58FF8 381 aa27.28■■□□□ 1.96
CERS1-202ENST00000542296 LTN1O94822 1766 aa27.28■■□□□ 1.96
CERS1-202ENST00000542296 SLFN5Q08AF3 891 aa27.28■■□□□ 1.96
CERS1-202ENST00000542296 KCNH5Q8NCM2 988 aa27.27■■□□□ 1.96
CERS1-202ENST00000542296 NPHP3Q7Z494 1330 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms