RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 NOM1Q5C9Z4 860 aaKnown RBP6.37□□□□□ -1.39
SNHG1-218ENST00000541615 SWT1Q5T5J6 900 aaKnown RBP6.37□□□□□ -1.39
SNHG1-218ENST00000541615 RINLQ6ZS11 566 aa6.37□□□□□ -1.39
SNHG1-218ENST00000541615 EXOC8Q8IYI6 725 aa6.37□□□□□ -1.39
SNHG1-218ENST00000541615 NUB1Q9Y5A7 615 aa6.37□□□□□ -1.39
SNHG1-218ENST00000541615 PEG3Q9GZU2 1588 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 IPO7O95373 1038 aaKnown RBP6.36□□□□□ -1.39
SNHG1-218ENST00000541615 LSM11P83369 360 aaKnown RBP eCLIP6.36□□□□□ -1.391e-6■□□□□ 9.9
SNHG1-218ENST00000541615 CBX1P83916 185 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 SYCP1Q15431 976 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 CCDC96Q2M329 555 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 FAM161AQ3B820 660 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 LRCH2Q5VUJ6 765 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 ANKRD23Q86SG2 305 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 TMC2Q8TDI7 906 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 RASSF4Q9H2L5 321 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 DEF6Q9H4E7 631 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 SUDS3Q9H7L9 328 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-218ENST00000541615 NUDCQ9Y266 331 aa6.36□□□□□ -1.39
SNHG1-218ENST00000541615 NUDT7P0C024 238 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 SETSIPP0DME0 302 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 ANKRD13DQ6ZTN6 518 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 TMTC2Q8N394 836 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 MSL3Q8N5Y2 521 aaKnown RBP6.35□□□□□ -1.39
SNHG1-218ENST00000541615 RNF217Q8TC41 542 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 TSPAN18Q96SJ8 248 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 CWC15Q9P013 229 aaKnown RBP6.35□□□□□ -1.39
SNHG1-218ENST00000541615 ANAPC4Q9UJX5 808 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 PAXBP1Q9Y5B6 917 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 PCDHGA4Q9Y5G9 962 aa6.35□□□□□ -1.39
SNHG1-218ENST00000541615 CEP162Q5TB80 1403 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 TNIKQ9UKE5 1360 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 ERBB4Q15303 1308 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 KLHL33A6NCF5 533 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 MPHOSPH10O00566 681 aaKnown RBP6.34□□□□□ -1.39
SNHG1-218ENST00000541615 IRF6O14896 467 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 TRAK2O60296 914 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 EIF3JO75822 258 aaKnown RBP6.34□□□□□ -1.39
SNHG1-218ENST00000541615 MCM4P33991 863 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.39
SNHG1-218ENST00000541615 SARNPP82979 210 aaKnown RBP6.34□□□□□ -1.39
SNHG1-218ENST00000541615 JMYQ8N9B5 988 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 DIAPH3Q9NSV4 1193 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 CCDC39Q9UFE4 941 aa6.34□□□□□ -1.39
SNHG1-218ENST00000541615 SMARCA2P51531 1590 aa6.33□□□□□ -1.4
SNHG1-218ENST00000541615 HMGB1P1B2RPK0 211 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-218ENST00000541615 HSP90AB1P08238 724 aaKnown RBP6.33□□□□□ -1.4
SNHG1-218ENST00000541615 CHAF1AQ13111 956 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-218ENST00000541615 RABEP1Q15276 862 aa6.33□□□□□ -1.4
SNHG1-218ENST00000541615 ZRSR2Q15696 482 aaKnown RBP6.33□□□□□ -1.4
SNHG1-218ENST00000541615 CT47A1Q5JQC4 288 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-218ENST00000541615 TBC1D22AQ8WUA7 517 aa6.33□□□□□ -1.4
SNHG1-218ENST00000541615 NUCKS1Q9H1E3 243 aaKnown RBP6.33□□□□□ -1.4
SNHG1-218ENST00000541615 LHX6Q9UPM6 363 aa6.33□□□□□ -1.4
SNHG1-218ENST00000541615 RSF1Q96T23 1441 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-218ENST00000541615 PSDA5PKW4 1024 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-218ENST00000541615 DHX16O60231 1041 aaKnown RBP6.32□□□□□ -1.4
SNHG1-218ENST00000541615 ERCC3P19447 782 aa6.32□□□□□ -1.4
SNHG1-218ENST00000541615 ERCC4Q92889 916 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-218ENST00000541615 SIRT1Q96EB6 747 aa6.32□□□□□ -1.4
SNHG1-218ENST00000541615 PANK2Q9BZ23 570 aa6.32□□□□□ -1.4
SNHG1-218ENST00000541615 ZKSCAN5Q9Y2L8 839 aa6.32□□□□□ -1.4
SNHG1-218ENST00000541615 CUX2O14529 1486 aa6.32□□□□□ -1.4
SNHG1-218ENST00000541615 SCRIBQ14160 1630 aa6.32□□□□□ -1.4
SNHG1-218ENST00000541615 H0YHG0 523 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 PPP1R37O75864 691 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 TPM3P06753 285 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 CASQ1P31415 396 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 ATP6V1AP38606 617 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 NASPP49321 788 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-218ENST00000541615 TERF2Q15554 542 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 C11orf91Q3C1V1 193 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 P3H3Q8IVL6 736 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 CHMP5Q9NZZ3 219 aa6.31□□□□□ -1.4
SNHG1-218ENST00000541615 BAZ1BQ9UIG0 1483 aaKnown RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 REC8O95072 547 aa6.3□□□□□ -1.4
SNHG1-218ENST00000541615 SLFN14P0C7P3 912 aa6.3□□□□□ -1.4
SNHG1-218ENST00000541615 CAPN2P17655 700 aa6.3□□□□□ -1.4
SNHG1-218ENST00000541615 GSCP56915 257 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 IRX1P78414 480 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 FAM50AQ14320 339 aaKnown RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 MUM1L1Q5H9M0 696 aa6.3□□□□□ -1.4
SNHG1-218ENST00000541615 POTEEQ6S8J3 1075 aa6.3□□□□□ -1.4
SNHG1-218ENST00000541615 NUTM1Q86Y26 1132 aa6.3□□□□□ -1.4
SNHG1-218ENST00000541615 PTCD2Q8WV60 388 aaKnown RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 SNRNP27Q8WVK2 155 aaKnown RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 GBP4Q96PP9 640 aa6.3□□□□□ -1.4
SNHG1-218ENST00000541615 TEX13AQ9BXU3 409 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 TMX4Q9H1E5 349 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 SLKQ9H2G2 1235 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 RSPH14Q9UHP6 348 aa6.3□□□□□ -1.4
SNHG1-218ENST00000541615 KTN1Q86UP2 1357 aaKnown RBP6.3□□□□□ -1.4
SNHG1-218ENST00000541615 A0A1B0GUL7 405 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 KDM4FA0A1W2PPD8 638 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 CCP110O43303 1012 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 COQ9O75208 318 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 FOXK1P85037 733 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 KIAA2012Q0VF49 1180 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 MYBPC2Q14324 1141 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 CDC37Q16543 378 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms