RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 NUBP1P53384 320 aa11.69□□□□□ -0.54
LMO3-226ENST00000541589 PRAG1Q86YV5 1406 aa11.69□□□□□ -0.54
LMO3-226ENST00000541589 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
LMO3-226ENST00000541589 SLIT2O94813 1529 aa11.68□□□□□ -0.54
LMO3-226ENST00000541589 PXDNQ92626 1479 aa11.68□□□□□ -0.54
LMO3-226ENST00000541589 ROBO2Q9HCK4 1378 aa11.68□□□□□ -0.54
LMO3-226ENST00000541589 UNC5CLQ8IV45 518 aa11.68□□□□□ -0.54
LMO3-226ENST00000541589 SPHKAPQ2M3C7 1700 aa11.67□□□□□ -0.54
LMO3-226ENST00000541589 MARF1Q9Y4F3 1742 aaKnown RBP11.67□□□□□ -0.54
LMO3-226ENST00000541589 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
LMO3-226ENST00000541589 NPHP3Q7Z494 1330 aa11.67□□□□□ -0.54
LMO3-226ENST00000541589 CCDC61Q9Y6R9 512 aa11.67□□□□□ -0.54
LMO3-226ENST00000541589 NEXMIFQ5QGS0 1516 aa11.66□□□□□ -0.54
LMO3-226ENST00000541589 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
LMO3-226ENST00000541589 ONECUT3O60422 494 aaPredicted RBP11.65□□□□□ -0.54
LMO3-226ENST00000541589 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
LMO3-226ENST00000541589 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
LMO3-226ENST00000541589 NUP155O75694 1391 aa11.65□□□□□ -0.55
LMO3-226ENST00000541589 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
LMO3-226ENST00000541589 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
LMO3-226ENST00000541589 SEPT12Q8IYM1 358 aa11.64□□□□□ -0.55
LMO3-226ENST00000541589 BRWD3Q6RI45 1802 aa11.64□□□□□ -0.55
LMO3-226ENST00000541589 ANKRD30BQ9BXX2 1392 aa11.64□□□□□ -0.55
LMO3-226ENST00000541589 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
LMO3-226ENST00000541589 ESCO1Q5FWF5 840 aa11.63□□□□□ -0.55
LMO3-226ENST00000541589 FOXO3O43524 673 aa11.62□□□□□ -0.55
LMO3-226ENST00000541589 VPS72Q15906 364 aa11.62□□□□□ -0.55
LMO3-226ENST00000541589 DIEXFQ68CQ4 756 aaKnown RBP11.62□□□□□ -0.55
LMO3-226ENST00000541589 BAG6P46379 1132 aa11.61□□□□□ -0.55
LMO3-226ENST00000541589 XPCQ01831 940 aaPredicted RBP11.61□□□□□ -0.55
LMO3-226ENST00000541589 CDC42BPGQ6DT37 1551 aa11.61□□□□□ -0.55
LMO3-226ENST00000541589 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
LMO3-226ENST00000541589 LRPPRCP42704 1394 aaKnown RBP11.6□□□□□ -0.55
LMO3-226ENST00000541589 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
LMO3-226ENST00000541589 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
LMO3-226ENST00000541589 USP32Q8NFA0 1604 aa11.58□□□□□ -0.56
LMO3-226ENST00000541589 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
LMO3-226ENST00000541589 VGFO15240 615 aaPredicted RBP11.57□□□□□ -0.56
LMO3-226ENST00000541589 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
LMO3-226ENST00000541589 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
LMO3-226ENST00000541589 DISP2A7MBM2 1401 aa11.56□□□□□ -0.56
LMO3-226ENST00000541589 YY1P25490 414 aa11.56□□□□□ -0.56
LMO3-226ENST00000541589 EN1Q05925 392 aaPredicted RBP11.56□□□□□ -0.56
LMO3-226ENST00000541589 R3HDM1Q15032 1099 aaKnown RBP11.56□□□□□ -0.56
LMO3-226ENST00000541589 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
LMO3-226ENST00000541589 NWD2Q9ULI1 1742 aa11.55□□□□□ -0.56
LMO3-226ENST00000541589 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
LMO3-226ENST00000541589 CCDC144AA2RUR9 1427 aa11.54□□□□□ -0.56
LMO3-226ENST00000541589 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
LMO3-226ENST00000541589 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
LMO3-226ENST00000541589 PLCH1Q4KWH8 1693 aa11.53□□□□□ -0.56
LMO3-226ENST00000541589 TECPR2O15040 1411 aa11.52□□□□□ -0.56
LMO3-226ENST00000541589 NUTM2FA1L443 756 aa11.52□□□□□ -0.56
LMO3-226ENST00000541589 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.56
LMO3-226ENST00000541589 L3MBTL2Q969R5 705 aa11.52□□□□□ -0.56
LMO3-226ENST00000541589 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.56
LMO3-226ENST00000541589 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.57
LMO3-226ENST00000541589 FAM83GA6ND36 823 aa11.51□□□□□ -0.57
LMO3-226ENST00000541589 MAP3K13O43283 966 aa11.51□□□□□ -0.57
LMO3-226ENST00000541589 KIF1BO60333 1816 aa11.51□□□□□ -0.57
LMO3-226ENST00000541589 KIF1AQ12756 1690 aa11.51□□□□□ -0.57
LMO3-226ENST00000541589 RGPD1P0DJD0 1748 aa11.51□□□□□ -0.57
LMO3-226ENST00000541589 EZH2Q15910 746 aaKnown RBP11.51□□□□□ -0.57
LMO3-226ENST00000541589 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
LMO3-226ENST00000541589 WAPLQ7Z5K2 1190 aa11.51□□□□□ -0.57
LMO3-226ENST00000541589 DCAF8Q5TAQ9 597 aa11.5□□□□□ -0.57
LMO3-226ENST00000541589 CAMKK2Q96RR4 588 aa11.5□□□□□ -0.57
LMO3-226ENST00000541589 SBNO1A3KN83 1393 aa11.49□□□□□ -0.57
LMO3-226ENST00000541589 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
LMO3-226ENST00000541589 FAM182BQ5T319 152 aa11.49□□□□□ -0.57
LMO3-226ENST00000541589 NRAPQ86VF7 1730 aa11.49□□□□□ -0.57
LMO3-226ENST00000541589 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
LMO3-226ENST00000541589 FMN2Q9NZ56 1722 aa11.49□□□□□ -0.57
LMO3-226ENST00000541589 ABCC11Q96J66 1382 aa11.49□□□□□ -0.57
LMO3-226ENST00000541589 PLEKHH1Q9ULM0 1364 aa11.49□□□□□ -0.57
LMO3-226ENST00000541589 ABCA3Q99758 1704 aa11.48□□□□□ -0.57
LMO3-226ENST00000541589 A0A0G2JS52 829 aa11.48□□□□□ -0.57
LMO3-226ENST00000541589 MYT1Q01538 1121 aa11.48□□□□□ -0.57
LMO3-226ENST00000541589 PSME1Q06323 249 aa11.48□□□□□ -0.57
LMO3-226ENST00000541589 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
LMO3-226ENST00000541589 ARHGEF10O15013 1369 aa11.47□□□□□ -0.57
LMO3-226ENST00000541589 PPLO60437 1756 aa11.47□□□□□ -0.57
LMO3-226ENST00000541589 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
LMO3-226ENST00000541589 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
LMO3-226ENST00000541589 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.57
LMO3-226ENST00000541589 SPOCK2Q92563 424 aa11.46□□□□□ -0.57
LMO3-226ENST00000541589 BTG4Q9NY30 223 aa11.46□□□□□ -0.57
LMO3-226ENST00000541589 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
LMO3-226ENST00000541589 THSD7AQ9UPZ6 1657 aa11.46□□□□□ -0.58
LMO3-226ENST00000541589 NRXN1Q9ULB1 1477 aa11.45□□□□□ -0.58
LMO3-226ENST00000541589 STK26Q9P289 416 aa11.45□□□□□ -0.58
LMO3-226ENST00000541589 ADGRF5Q8IZF2 1346 aa11.45□□□□□ -0.58
LMO3-226ENST00000541589 KNDC1Q76NI1 1749 aa11.44□□□□□ -0.58
LMO3-226ENST00000541589 NBPF8Q3BBV2 869 aa11.44□□□□□ -0.58
LMO3-226ENST00000541589 SIRT1Q96EB6 747 aa11.44□□□□□ -0.58
LMO3-226ENST00000541589 SGIP1Q9BQI5 828 aa11.44□□□□□ -0.58
LMO3-226ENST00000541589 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
LMO3-226ENST00000541589 ADGRB2O60241 1585 aa11.43□□□□□ -0.58
LMO3-226ENST00000541589 TRIM37O94972 964 aa11.43□□□□□ -0.58
LMO3-226ENST00000541589 ASTLQ6HA08 431 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms