RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 USP6P35125 1406 aa11.6□□□□□ -0.55
THBS3-210ENST00000541576 NME9Q86XW9 330 aa11.6□□□□□ -0.55
THBS3-210ENST00000541576 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
THBS3-210ENST00000541576 STRCP1A6NGW2 1772 aa11.6□□□□□ -0.55
THBS3-210ENST00000541576 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
THBS3-210ENST00000541576 MTHFSP49914 203 aa11.59□□□□□ -0.55
THBS3-210ENST00000541576 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
THBS3-210ENST00000541576 TMEM94Q12767 1356 aa11.59□□□□□ -0.55
THBS3-210ENST00000541576 ZBED9Q6R2W3 1325 aa11.58□□□□□ -0.56
THBS3-210ENST00000541576 ERICH6Q7L0X2 663 aa11.58□□□□□ -0.56
THBS3-210ENST00000541576 C19orf44Q9H6X5 657 aa11.58□□□□□ -0.56
THBS3-210ENST00000541576 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.56
THBS3-210ENST00000541576 INSRP06213 1382 aa11.58□□□□□ -0.56
THBS3-210ENST00000541576 COG3Q96JB2 828 aa11.58□□□□□ -0.56
THBS3-210ENST00000541576 CFAP53Q96M91 514 aa11.58□□□□□ -0.56
THBS3-210ENST00000541576 PHF8Q9UPP1 1060 aa11.58□□□□□ -0.56
THBS3-210ENST00000541576 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
THBS3-210ENST00000541576 SSH2Q76I76 1423 aa11.57□□□□□ -0.56
THBS3-210ENST00000541576 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
THBS3-210ENST00000541576 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
THBS3-210ENST00000541576 TTC21AQ8NDW8 1320 aa11.56□□□□□ -0.56
THBS3-210ENST00000541576 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
THBS3-210ENST00000541576 ATF3P18847 181 aa11.55□□□□□ -0.56
THBS3-210ENST00000541576 FBLN1P23142 703 aa11.55□□□□□ -0.56
THBS3-210ENST00000541576 RBM19Q9Y4C8 960 aaKnown RBP11.55□□□□□ -0.56
THBS3-210ENST00000541576 DMRT2Q9Y5R5 561 aa11.55□□□□□ -0.56
THBS3-210ENST00000541576 NEFLP07196 543 aa11.54□□□□□ -0.56
THBS3-210ENST00000541576 DCCP43146 1447 aa11.54□□□□□ -0.56
THBS3-210ENST00000541576 ZNF335Q9H4Z2 1342 aaPredicted RBP11.54□□□□□ -0.56
THBS3-210ENST00000541576 IRX6P78412 446 aaPredicted RBP11.54□□□□□ -0.56
THBS3-210ENST00000541576 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
THBS3-210ENST00000541576 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
THBS3-210ENST00000541576 OVOS2A0A0J9YW53 1432 aa11.54□□□□□ -0.56
THBS3-210ENST00000541576 OVOS2Q6IE36 1432 aa11.54□□□□□ -0.56
THBS3-210ENST00000541576 AATKQ6ZMQ8 1374 aa11.53□□□□□ -0.56
THBS3-210ENST00000541576 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
THBS3-210ENST00000541576 POLKQ9UBT6 870 aa11.53□□□□□ -0.56
THBS3-210ENST00000541576 C1orf167Q5SNV9 1468 aa11.53□□□□□ -0.56
THBS3-210ENST00000541576 SHPRHQ149N8 1683 aa11.53□□□□□ -0.56
THBS3-210ENST00000541576 MSH6P52701 1360 aa11.53□□□□□ -0.56
THBS3-210ENST00000541576 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
THBS3-210ENST00000541576 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.57
THBS3-210ENST00000541576 PPM1GO15355 546 aaPredicted RBP11.52□□□□□ -0.57
THBS3-210ENST00000541576 PSME1Q06323 249 aa11.52□□□□□ -0.57
THBS3-210ENST00000541576 LRRC7Q96NW7 1537 aa11.52□□□□□ -0.57
THBS3-210ENST00000541576 PNPLA6Q8IY17 1366 aa11.51□□□□□ -0.57
THBS3-210ENST00000541576 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
THBS3-210ENST00000541576 USP31Q70CQ4 1352 aa11.51□□□□□ -0.57
THBS3-210ENST00000541576 MST1RQ04912 1400 aa11.51□□□□□ -0.57
THBS3-210ENST00000541576 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
THBS3-210ENST00000541576 NUDCQ9Y266 331 aa11.51□□□□□ -0.57
THBS3-210ENST00000541576 EMILIN1Q9Y6C2 1016 aa11.51□□□□□ -0.57
THBS3-210ENST00000541576 COL3A1P02461 1466 aaPredicted RBP11.51□□□□□ -0.57
THBS3-210ENST00000541576 PIK3C2AO00443 1686 aa11.5□□□□□ -0.57
THBS3-210ENST00000541576 SMG6Q86US8 1419 aaKnown RBP11.5□□□□□ -0.57
THBS3-210ENST00000541576 XIRP1Q702N8 1843 aaKnown RBP11.5□□□□□ -0.57
THBS3-210ENST00000541576 FOXO3O43524 673 aa11.5□□□□□ -0.57
THBS3-210ENST00000541576 NLRP6P59044 892 aa11.5□□□□□ -0.57
THBS3-210ENST00000541576 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
THBS3-210ENST00000541576 ABTB2Q8N961 1025 aa11.5□□□□□ -0.57
THBS3-210ENST00000541576 DIAPH1O60610 1272 aaKnown RBP11.49□□□□□ -0.57
THBS3-210ENST00000541576 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
THBS3-210ENST00000541576 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
THBS3-210ENST00000541576 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
THBS3-210ENST00000541576 CDK12Q9NYV4 1490 aaPredicted RBP11.49□□□□□ -0.57
THBS3-210ENST00000541576 U2SURPO15042 1029 aaKnown RBP11.48□□□□□ -0.57
THBS3-210ENST00000541576 SOX12O15370 315 aa11.48□□□□□ -0.57
THBS3-210ENST00000541576 NUTM2GQ5VZR2 741 aa11.48□□□□□ -0.57
THBS3-210ENST00000541576 APAF1O14727 1248 aa11.47□□□□□ -0.57
THBS3-210ENST00000541576 XPCQ01831 940 aaPredicted RBP11.47□□□□□ -0.57
THBS3-210ENST00000541576 USP54Q70EL1 1684 aa11.46□□□□□ -0.57
THBS3-210ENST00000541576 RUNDC1Q96C34 613 aa11.46□□□□□ -0.57
THBS3-210ENST00000541576 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.57
THBS3-210ENST00000541576 KRT28Q7Z3Y7 464 aa11.46□□□□□ -0.58
THBS3-210ENST00000541576 PDE3BQ13370 1112 aa11.45□□□□□ -0.58
THBS3-210ENST00000541576 MARF1Q9Y4F3 1742 aaKnown RBP11.45□□□□□ -0.58
THBS3-210ENST00000541576 MAP3K19Q56UN5 1328 aa11.44□□□□□ -0.58
THBS3-210ENST00000541576 IL13P35225 146 aa11.44□□□□□ -0.58
THBS3-210ENST00000541576 NGEFQ8N5V2 710 aa11.44□□□□□ -0.58
THBS3-210ENST00000541576 NPHP3Q7Z494 1330 aa11.44□□□□□ -0.58
THBS3-210ENST00000541576 TRPM3Q9HCF6 1732 aaPredicted RBP11.43□□□□□ -0.58
THBS3-210ENST00000541576 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
THBS3-210ENST00000541576 ZNF521Q96K83 1311 aa11.43□□□□□ -0.58
THBS3-210ENST00000541576 SBNO1A3KN83 1393 aa11.43□□□□□ -0.58
THBS3-210ENST00000541576 MSH5O43196 834 aa11.43□□□□□ -0.58
THBS3-210ENST00000541576 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
THBS3-210ENST00000541576 FLT4P35916 1363 aa11.43□□□□□ -0.58
THBS3-210ENST00000541576 TCP11L2Q8N4U5 519 aa11.43□□□□□ -0.58
THBS3-210ENST00000541576 PNNQ9H307 717 aaKnown RBP11.43□□□□□ -0.58
THBS3-210ENST00000541576 PEAK1Q9H792 1746 aa11.43□□□□□ -0.58
THBS3-210ENST00000541576 AMPHP49418 695 aa11.42□□□□□ -0.58
THBS3-210ENST00000541576 HSP90AB2PQ58FF8 381 aa11.42□□□□□ -0.58
THBS3-210ENST00000541576 BRINP3Q76B58 766 aa11.42□□□□□ -0.58
THBS3-210ENST00000541576 DDX17Q92841 729 aaKnown RBP11.42□□□□□ -0.58
THBS3-210ENST00000541576 FCHSD2O94868 740 aa11.42□□□□□ -0.58
THBS3-210ENST00000541576 IQSEC2Q5JU85 1478 aa11.42□□□□□ -0.58
THBS3-210ENST00000541576 NBR1Q14596 966 aa11.41□□□□□ -0.58
THBS3-210ENST00000541576 KCNH5Q8NCM2 988 aa11.41□□□□□ -0.58
THBS3-210ENST00000541576 PLEKHF1Q96S99 279 aa11.41□□□□□ -0.58
THBS3-210ENST00000541576 RRP7AQ9Y3A4 280 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms