RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 COL3A1P02461 1466 aaPredicted RBP26.5■■□□□ 1.83
OTUB1-210ENST00000541478 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
OTUB1-210ENST00000541478 SLFN5Q08AF3 891 aa26.49■■□□□ 1.83
OTUB1-210ENST00000541478 ANKLE2Q86XL3 938 aa26.49■■□□□ 1.83
OTUB1-210ENST00000541478 E9PSI1 815 aa26.48■■□□□ 1.83
OTUB1-210ENST00000541478 U2AF1L5P0DN76 240 aaPredicted RBP26.48■■□□□ 1.83
OTUB1-210ENST00000541478 U2AF1Q01081 240 aaKnown RBP eCLIP26.48■■□□□ 1.83
OTUB1-210ENST00000541478 NCBP3Q53F19 620 aaKnown RBP26.48■■□□□ 1.83
OTUB1-210ENST00000541478 PNPLA6Q8IY17 1366 aa26.47■■□□□ 1.83
OTUB1-210ENST00000541478 NCKAP5LQ9HCH0 1330 aa26.45■■□□□ 1.82
OTUB1-210ENST00000541478 PLEKHG3A1L390 1219 aa26.44■■□□□ 1.82
OTUB1-210ENST00000541478 TRMT2AQ8IZ69 625 aaKnown RBP26.44■■□□□ 1.82
OTUB1-210ENST00000541478 TCP11L2Q8N4U5 519 aa26.44■■□□□ 1.82
OTUB1-210ENST00000541478 DIAPH1O60610 1272 aaKnown RBP26.43■■□□□ 1.82
OTUB1-210ENST00000541478 WWC1Q8IX03 1113 aa26.43■■□□□ 1.82
OTUB1-210ENST00000541478 COG3Q96JB2 828 aa26.43■■□□□ 1.82
OTUB1-210ENST00000541478 AATKQ6ZMQ8 1374 aa26.42■■□□□ 1.82
OTUB1-210ENST00000541478 NKTRP30414 1462 aaKnown RBP26.42■■□□□ 1.82
OTUB1-210ENST00000541478 CCDC27Q2M243 656 aa26.42■■□□□ 1.82
OTUB1-210ENST00000541478 NME9Q86XW9 330 aa26.42■■□□□ 1.82
OTUB1-210ENST00000541478 U2SURPO15042 1029 aaKnown RBP26.41■■□□□ 1.82
OTUB1-210ENST00000541478 PNNQ9H307 717 aaKnown RBP26.41■■□□□ 1.82
OTUB1-210ENST00000541478 NRKQ7Z2Y5 1582 aa26.4■■□□□ 1.82
OTUB1-210ENST00000541478 POLKQ9UBT6 870 aa26.39■■□□□ 1.82
OTUB1-210ENST00000541478 ACEP12821 1306 aa26.39■■□□□ 1.82
OTUB1-210ENST00000541478 B4GALNT3Q6L9W6 998 aa26.39■■□□□ 1.81
OTUB1-210ENST00000541478 PHF23Q9BUL5 403 aaPredicted RBP26.38■■□□□ 1.81
OTUB1-210ENST00000541478 KCNA6P17658 529 aa26.37■■□□□ 1.81
OTUB1-210ENST00000541478 USP6P35125 1406 aa26.37■■□□□ 1.81
OTUB1-210ENST00000541478 WDR63Q8IWG1 891 aa26.37■■□□□ 1.81
OTUB1-210ENST00000541478 CDK12Q9NYV4 1490 aaPredicted RBP26.37■■□□□ 1.81
OTUB1-210ENST00000541478 ANKARQ7Z5J8 1434 aa26.36■■□□□ 1.81
OTUB1-210ENST00000541478 MAPK8IP3Q9UPT6 1336 aa26.36■■□□□ 1.81
OTUB1-210ENST00000541478 MAP2P11137 1827 aaKnown RBP26.36■■□□□ 1.81
OTUB1-210ENST00000541478 TTC21BQ7Z4L5 1316 aa26.35■■□□□ 1.81
OTUB1-210ENST00000541478 NEUROD2Q15784 382 aa26.35■■□□□ 1.81
OTUB1-210ENST00000541478 NUTM2FA1L443 756 aa26.35■■□□□ 1.81
OTUB1-210ENST00000541478 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.35■■□□□ 1.81
OTUB1-210ENST00000541478 CCDC136Q96JN2 1154 aa26.35■■□□□ 1.81
OTUB1-210ENST00000541478 SPINK5Q9NQ38 1064 aaPredicted RBP26.34■■□□□ 1.81
OTUB1-210ENST00000541478 RRP7AQ9Y3A4 280 aaKnown RBP26.34■■□□□ 1.81
OTUB1-210ENST00000541478 CHD2O14647 1828 aaKnown RBP26.33■■□□□ 1.81
OTUB1-210ENST00000541478 PPM1GO15355 546 aaPredicted RBP26.33■■□□□ 1.81
OTUB1-210ENST00000541478 PLEKHF1Q96S99 279 aa26.33■■□□□ 1.81
OTUB1-210ENST00000541478 TTC21AQ8NDW8 1320 aa26.31■■□□□ 1.8
OTUB1-210ENST00000541478 TSHZ2Q9NRE2 1034 aa26.3■■□□□ 1.8
OTUB1-210ENST00000541478 OVOS2A0A0J9YW53 1432 aa26.3■■□□□ 1.8
OTUB1-210ENST00000541478 OVOS2Q6IE36 1432 aa26.3■■□□□ 1.8
OTUB1-210ENST00000541478 FCHSD2O94868 740 aa26.3■■□□□ 1.8
OTUB1-210ENST00000541478 ZRANB1Q9UGI0 708 aa26.3■■□□□ 1.8
OTUB1-210ENST00000541478 DMRT2Q9Y5R5 561 aa26.3■■□□□ 1.8
OTUB1-210ENST00000541478 NPHP4O75161 1426 aaPredicted RBP26.29■■□□□ 1.8
OTUB1-210ENST00000541478 EMILIN1Q9Y6C2 1016 aa26.29■■□□□ 1.8
OTUB1-210ENST00000541478 SSH2Q76I76 1423 aa26.29■■□□□ 1.8
OTUB1-210ENST00000541478 NEFMP07197 916 aa26.28■■□□□ 1.8
OTUB1-210ENST00000541478 FMN2Q9NZ56 1722 aa26.28■■□□□ 1.8
OTUB1-210ENST00000541478 EXOC6Q8TAG9 804 aa26.28■■□□□ 1.8
OTUB1-210ENST00000541478 NGDNQ8NEJ9 315 aaKnown RBP26.27■■□□□ 1.8
OTUB1-210ENST00000541478 PLIN1O60240 522 aa26.26■■□□□ 1.79
OTUB1-210ENST00000541478 FBLN1P23142 703 aa26.26■■□□□ 1.79
OTUB1-210ENST00000541478 TMPOP42166 694 aaKnown RBP26.26■■□□□ 1.79
OTUB1-210ENST00000541478 MYH16Q9H6N6 1097 aa26.25■■□□□ 1.79
OTUB1-210ENST00000541478 LRRC7Q96NW7 1537 aa26.25■■□□□ 1.79
OTUB1-210ENST00000541478 NALCNQ8IZF0 1738 aa26.24■■□□□ 1.79
OTUB1-210ENST00000541478 PMFBP1Q8TBY8 1022 aa26.24■■□□□ 1.79
OTUB1-210ENST00000541478 RGPD8O14715 1765 aaPredicted RBP26.24■■□□□ 1.79
OTUB1-210ENST00000541478 USP31Q70CQ4 1352 aa26.23■■□□□ 1.79
OTUB1-210ENST00000541478 IL13P35225 146 aa26.23■■□□□ 1.79
OTUB1-210ENST00000541478 LMTK3Q96Q04 1460 aa26.22■■□□□ 1.79
OTUB1-210ENST00000541478 RRS1Q15050 365 aaKnown RBP26.22■■□□□ 1.79
OTUB1-210ENST00000541478 RSPH6AQ9H0K4 717 aa26.22■■□□□ 1.79
OTUB1-210ENST00000541478 PRKAR2BP31323 418 aa26.19■■□□□ 1.78
OTUB1-210ENST00000541478 ADGRL3Q9HAR2 1447 aa26.19■■□□□ 1.78
OTUB1-210ENST00000541478 IL16Q14005 1332 aa26.18■■□□□ 1.78
OTUB1-210ENST00000541478 RIPK4P57078 832 aa26.18■■□□□ 1.78
OTUB1-210ENST00000541478 AEBP2Q6ZN18 517 aaPredicted RBP26.18■■□□□ 1.78
OTUB1-210ENST00000541478 CRBNQ96SW2 442 aa26.18■■□□□ 1.78
OTUB1-210ENST00000541478 TRIM35Q9UPQ4 493 aa26.16■■□□□ 1.78
OTUB1-210ENST00000541478 NWD1Q149M9 1564 aa26.15■■□□□ 1.78
OTUB1-210ENST00000541478 HSPA2P54652 639 aa26.15■■□□□ 1.78
OTUB1-210ENST00000541478 CT47B1P0C2W7 299 aaPredicted RBP26.14■■□□□ 1.78
OTUB1-210ENST00000541478 HMOX1P09601 288 aa26.13■■□□□ 1.77
OTUB1-210ENST00000541478 BCAR3O75815 825 aa26.12■■□□□ 1.77
OTUB1-210ENST00000541478 C20orf194Q5TEA3 1177 aa26.12■■□□□ 1.77
OTUB1-210ENST00000541478 PIK3C2AO00443 1686 aa26.12■■□□□ 1.77
OTUB1-210ENST00000541478 NFE2L2Q16236 605 aa26.11■■□□□ 1.77
OTUB1-210ENST00000541478 PHF8Q9UPP1 1060 aa26.1■■□□□ 1.77
OTUB1-210ENST00000541478 FANCIQ9NVI1 1328 aa26.1■■□□□ 1.77
OTUB1-210ENST00000541478 CALD1Q05682 793 aaKnown RBP26.09■■□□□ 1.77
OTUB1-210ENST00000541478 USP54Q70EL1 1684 aa26.09■■□□□ 1.77
OTUB1-210ENST00000541478 RARSP54136 660 aaKnown RBP26.09■■□□□ 1.77
OTUB1-210ENST00000541478 CANXP27824 592 aaKnown RBP26.08■■□□□ 1.77
OTUB1-210ENST00000541478 EIF4A2Q14240 407 aaKnown RBP26.08■■□□□ 1.77
OTUB1-210ENST00000541478 PDE3AQ14432 1141 aa26.08■■□□□ 1.77
OTUB1-210ENST00000541478 SBNO1A3KN83 1393 aa26.07■■□□□ 1.76
OTUB1-210ENST00000541478 FLT4P35916 1363 aa26.07■■□□□ 1.76
OTUB1-210ENST00000541478 LMOD3Q0VAK6 560 aa26.07■■□□□ 1.76
OTUB1-210ENST00000541478 C14orf37Q86TY3 774 aa26.07■■□□□ 1.76
OTUB1-210ENST00000541478 PEAK1Q9H792 1746 aa26.07■■□□□ 1.76
OTUB1-210ENST00000541478 NLRP6P59044 892 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms