RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 UNC93B1Q9H1C4 597 aa9.05□□□□□ -0.96
KNTC1-211ENST00000541427 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
KNTC1-211ENST00000541427 AMHR2Q16671 573 aa9.04□□□□□ -0.96
KNTC1-211ENST00000541427 FDX1P10109 184 aa9.03□□□□□ -0.96
KNTC1-211ENST00000541427 EVA1BQ9NVM1 165 aa9.03□□□□□ -0.96
KNTC1-211ENST00000541427 PCDHGC3Q9UN70 934 aa9.03□□□□□ -0.96
KNTC1-211ENST00000541427 TIMP2P16035 220 aa9.02□□□□□ -0.97
KNTC1-211ENST00000541427 VARSP26640 1264 aaKnown RBP9.02□□□□□ -0.97
KNTC1-211ENST00000541427 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
KNTC1-211ENST00000541427 PTPRNQ16849 979 aa9.02□□□□□ -0.97
KNTC1-211ENST00000541427 ZNF511Q8NB15 262 aa9.02□□□□□ -0.97
KNTC1-211ENST00000541427 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
KNTC1-211ENST00000541427 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.97
KNTC1-211ENST00000541427 ADH1CP00326 375 aa9.01□□□□□ -0.97
KNTC1-211ENST00000541427 PDE4DQ08499 809 aa9.01□□□□□ -0.97
KNTC1-211ENST00000541427 KCNMA1Q12791 1236 aa9.01□□□□□ -0.97
KNTC1-211ENST00000541427 MPNDQ8N594 471 aa9.01□□□□□ -0.97
KNTC1-211ENST00000541427 KCTD17Q8N5Z5 321 aa9.01□□□□□ -0.97
KNTC1-211ENST00000541427 CLCN1P35523 988 aa9□□□□□ -0.97
KNTC1-211ENST00000541427 PARP9Q8IXQ6 854 aa9□□□□□ -0.97
KNTC1-211ENST00000541427 GSK3AP49840 483 aa8.99□□□□□ -0.97
KNTC1-211ENST00000541427 KCNH2Q12809 1159 aa8.99□□□□□ -0.97
KNTC1-211ENST00000541427 TTLL12Q14166 644 aaPredicted RBP8.98□□□□□ -0.97
KNTC1-211ENST00000541427 KLF16Q9BXK1 252 aaPredicted RBP8.98□□□□□ -0.97
KNTC1-211ENST00000541427 MAN1A2O60476 641 aa8.97□□□□□ -0.97
KNTC1-211ENST00000541427 GPBP1L1Q9HC44 474 aaPredicted RBP8.97□□□□□ -0.97
KNTC1-211ENST00000541427 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
KNTC1-211ENST00000541427 GIGYF2Q6Y7W6 1299 aaKnown RBP8.96□□□□□ -0.98
KNTC1-211ENST00000541427 PPFIA3O75145 1194 aa8.95□□□□□ -0.98
KNTC1-211ENST00000541427 C6orf118Q5T5N4 469 aa8.95□□□□□ -0.98
KNTC1-211ENST00000541427 PRR7Q8TB68 274 aa8.95□□□□□ -0.98
KNTC1-211ENST00000541427 ZIC2O95409 532 aaPredicted RBP8.94□□□□□ -0.98
KNTC1-211ENST00000541427 FAM174AQ8TBP5 190 aa8.94□□□□□ -0.98
KNTC1-211ENST00000541427 ZFAND3Q9H8U3 227 aa8.94□□□□□ -0.98
KNTC1-211ENST00000541427 NDUFV2P19404 249 aa8.93□□□□□ -0.98
KNTC1-211ENST00000541427 ARID5BQ14865 1188 aa8.93□□□□□ -0.98
KNTC1-211ENST00000541427 TMEM151AQ8N4L1 468 aa8.93□□□□□ -0.98
KNTC1-211ENST00000541427 SPIRE2Q8WWL2 714 aa8.93□□□□□ -0.98
KNTC1-211ENST00000541427 NEUROD2Q15784 382 aa8.92□□□□□ -0.98
KNTC1-211ENST00000541427 DESI1Q6ICB0 168 aa8.92□□□□□ -0.98
KNTC1-211ENST00000541427 ITPKCQ96DU7 683 aa8.92□□□□□ -0.98
KNTC1-211ENST00000541427 CDK15Q96Q40 435 aa8.92□□□□□ -0.98
KNTC1-211ENST00000541427 KDM4CQ9H3R0 1056 aa8.92□□□□□ -0.98
KNTC1-211ENST00000541427 GDF11O95390 407 aa8.91□□□□□ -0.98
KNTC1-211ENST00000541427 SSTR3P32745 418 aaPredicted RBP8.91□□□□□ -0.98
KNTC1-211ENST00000541427 RASSF7Q02833 373 aa8.91□□□□□ -0.98
KNTC1-211ENST00000541427 MOXD2PA6NHM9 499 aa8.9□□□□□ -0.98
KNTC1-211ENST00000541427 BMP2P12643 396 aa8.9□□□□□ -0.98
KNTC1-211ENST00000541427 CTHP32929 405 aa8.9□□□□□ -0.98
KNTC1-211ENST00000541427 MTMR2Q13614 643 aa8.9□□□□□ -0.98
KNTC1-211ENST00000541427 SPDYE5A6NIY4 337 aa8.89□□□□□ -0.99
KNTC1-211ENST00000541427 UPP2O95045 317 aa8.89□□□□□ -0.99
KNTC1-211ENST00000541427 NR3C2P08235 984 aa8.89□□□□□ -0.99
KNTC1-211ENST00000541427 FOXJ1Q92949 421 aa8.89□□□□□ -0.99
KNTC1-211ENST00000541427 NR5A1Q13285 461 aa8.88□□□□□ -0.99
KNTC1-211ENST00000541427 RNF225M0QZC1 329 aaPredicted RBP8.87□□□□□ -0.99
KNTC1-211ENST00000541427 KRT76Q01546 638 aa8.87□□□□□ -0.99
KNTC1-211ENST00000541427 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
KNTC1-211ENST00000541427 DNMT3LQ9UJW3 386 aa8.87□□□□□ -0.99
KNTC1-211ENST00000541427 ADAMTS8Q9UP79 889 aa8.87□□□□□ -0.99
KNTC1-211ENST00000541427 GRM5P41594 1212 aa8.86□□□□□ -0.99
KNTC1-211ENST00000541427 LYPD8Q6UX82 237 aa8.86□□□□□ -0.99
KNTC1-211ENST00000541427 GPR161Q8N6U8 529 aaKnown RBP8.86□□□□□ -0.99
KNTC1-211ENST00000541427 CNTNAP3BQ96NU0 1288 aa8.86□□□□□ -0.99
KNTC1-211ENST00000541427 CNTNAP3Q9BZ76 1288 aa8.86□□□□□ -0.99
KNTC1-211ENST00000541427 FAM117AQ9C073 453 aa8.86□□□□□ -0.99
KNTC1-211ENST00000541427 SOS2Q07890 1332 aaPredicted RBP8.85□□□□□ -0.99
KNTC1-211ENST00000541427 MEIOBQ8N635 442 aa8.85□□□□□ -0.99
KNTC1-211ENST00000541427 BEGAINQ9BUH8 593 aa8.85□□□□□ -0.99
KNTC1-211ENST00000541427 SPTLC1O15269 473 aa8.84□□□□□ -0.99
KNTC1-211ENST00000541427 AGERQ15109 404 aa8.84□□□□□ -0.99
KNTC1-211ENST00000541427 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
KNTC1-211ENST00000541427 MAP10Q9P2G4 905 aa8.83□□□□□ -1
KNTC1-211ENST00000541427 CFAP99D6REC4 459 aa8.81□□□□□ -1
KNTC1-211ENST00000541427 COL25A1Q9BXS0 654 aaPredicted RBP8.81□□□□□ -1
KNTC1-211ENST00000541427 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
KNTC1-211ENST00000541427 PTSQ03393 145 aa8.8□□□□□ -1
KNTC1-211ENST00000541427 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
KNTC1-211ENST00000541427 BPHLQ86WA6 291 aaPredicted RBP8.8□□□□□ -1
KNTC1-211ENST00000541427 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
KNTC1-211ENST00000541427 TSEN34Q9BSV6 310 aaKnown RBP8.8□□□□□ -1
KNTC1-211ENST00000541427 ZNF385CQ66K41 422 aaPredicted RBP8.79□□□□□ -1
KNTC1-211ENST00000541427 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
KNTC1-211ENST00000541427 SVOPQ8N4V2 548 aa8.79□□□□□ -1
KNTC1-211ENST00000541427 IL27Q8NEV9 243 aa8.79□□□□□ -1
KNTC1-211ENST00000541427 TTLL8A6PVC2 850 aa8.78□□□□□ -1
KNTC1-211ENST00000541427 FSHRP23945 695 aa8.78□□□□□ -1
KNTC1-211ENST00000541427 GJA5P36382 358 aa8.78□□□□□ -1
KNTC1-211ENST00000541427 TBC1D2Q9BYX2 928 aa8.78□□□□□ -1
KNTC1-211ENST00000541427 PCDHB15Q9Y5E8 787 aa8.78□□□□□ -1
KNTC1-211ENST00000541427 RNFT1Q5M7Z0 435 aa8.77□□□□□ -1.01
KNTC1-211ENST00000541427 RSBN1LQ6PCB5 846 aaPredicted RBP8.77□□□□□ -1.01
KNTC1-211ENST00000541427 DNMT3AQ9Y6K1 912 aaPredicted RBP8.77□□□□□ -1.01
KNTC1-211ENST00000541427 HRCP23327 699 aa8.76□□□□□ -1.01
KNTC1-211ENST00000541427 IRS1P35568 1242 aa8.76□□□□□ -1.01
KNTC1-211ENST00000541427 NANOS1Q8WY41 292 aaKnown RBP8.76□□□□□ -1.01
KNTC1-211ENST00000541427 FIGNL2A6NMB9 653 aa8.75□□□□□ -1.01
KNTC1-211ENST00000541427 MYSM1Q5VVJ2 828 aa8.75□□□□□ -1.01
KNTC1-211ENST00000541427 VASH1Q7L8A9 365 aaPredicted RBP8.75□□□□□ -1.01
KNTC1-211ENST00000541427 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms