RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TSPYL6Q8N831 410 aa13.05□□□□□ -0.32
CDC42SE1-207ENST00000540998 ERBB4Q15303 1308 aa13.05□□□□□ -0.32
CDC42SE1-207ENST00000540998 ANKRD45Q5TZF3 282 aa13.04□□□□□ -0.32
CDC42SE1-207ENST00000540998 DDX19BQ9UMR2 479 aa13.04□□□□□ -0.32
CDC42SE1-207ENST00000540998 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
CDC42SE1-207ENST00000540998 FYB1O15117 783 aa13.04□□□□□ -0.32
CDC42SE1-207ENST00000540998 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
CDC42SE1-207ENST00000540998 RSPH6AQ9H0K4 717 aa13.04□□□□□ -0.32
CDC42SE1-207ENST00000540998 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
CDC42SE1-207ENST00000540998 RAPGEF3O95398 923 aa13.03□□□□□ -0.32
CDC42SE1-207ENST00000540998 HDAC1Q13547 482 aaPredicted RBP13.03□□□□□ -0.32
CDC42SE1-207ENST00000540998 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
CDC42SE1-207ENST00000540998 MYO3AQ8NEV4 1616 aa13.03□□□□□ -0.32
CDC42SE1-207ENST00000540998 PHACTR3Q96KR7 559 aa13.03□□□□□ -0.32
CDC42SE1-207ENST00000540998 ADGRB3O60242 1522 aa13.03□□□□□ -0.32
CDC42SE1-207ENST00000540998 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.32
CDC42SE1-207ENST00000540998 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
CDC42SE1-207ENST00000540998 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.33
CDC42SE1-207ENST00000540998 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
CDC42SE1-207ENST00000540998 PRKAR2BP31323 418 aa13.02□□□□□ -0.33
CDC42SE1-207ENST00000540998 PRAM1Q96QH2 718 aa13.02□□□□□ -0.33
CDC42SE1-207ENST00000540998 AK9Q5TCS8 1911 aa13.01□□□□□ -0.33
CDC42SE1-207ENST00000540998 APBB1O00213 710 aa13.01□□□□□ -0.33
CDC42SE1-207ENST00000540998 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
CDC42SE1-207ENST00000540998 KIF2CQ99661 725 aa13.01□□□□□ -0.33
CDC42SE1-207ENST00000540998 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
CDC42SE1-207ENST00000540998 NUCB1Q02818 461 aa13.01□□□□□ -0.33
CDC42SE1-207ENST00000540998 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
CDC42SE1-207ENST00000540998 CHAMP1Q96JM3 812 aa13□□□□□ -0.33
CDC42SE1-207ENST00000540998 GLI2P10070 1586 aa13□□□□□ -0.33
CDC42SE1-207ENST00000540998 IDI1Q13907 227 aa13□□□□□ -0.33
CDC42SE1-207ENST00000540998 ZRANB1Q9UGI0 708 aa13□□□□□ -0.33
CDC42SE1-207ENST00000540998 SSFA2P28290 1259 aa13□□□□□ -0.33
CDC42SE1-207ENST00000540998 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
CDC42SE1-207ENST00000540998 CABP1Q9NZU7 370 aa13□□□□□ -0.33
CDC42SE1-207ENST00000540998 ABCA9Q8IUA7 1624 aa12.99□□□□□ -0.33
CDC42SE1-207ENST00000540998 DIAPH1O60610 1272 aaKnown RBP12.99□□□□□ -0.33
CDC42SE1-207ENST00000540998 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
CDC42SE1-207ENST00000540998 SIRT2Q8IXJ6 389 aa12.99□□□□□ -0.33
CDC42SE1-207ENST00000540998 PPLO60437 1756 aa12.99□□□□□ -0.33
CDC42SE1-207ENST00000540998 FAM83GA6ND36 823 aa12.99□□□□□ -0.33
CDC42SE1-207ENST00000540998 CAMSAP1Q5T5Y3 1602 aa12.98□□□□□ -0.33
CDC42SE1-207ENST00000540998 ADGRB2O60241 1585 aa12.98□□□□□ -0.33
CDC42SE1-207ENST00000540998 TBC1D9Q6ZT07 1266 aa12.98□□□□□ -0.33
CDC42SE1-207ENST00000540998 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
CDC42SE1-207ENST00000540998 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
CDC42SE1-207ENST00000540998 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
CDC42SE1-207ENST00000540998 ASXL2Q76L83 1435 aa12.98□□□□□ -0.33
CDC42SE1-207ENST00000540998 AAMPQ13685 434 aa12.98□□□□□ -0.33
CDC42SE1-207ENST00000540998 C16orf71Q8IYS4 520 aaPredicted RBP12.97□□□□□ -0.33
CDC42SE1-207ENST00000540998 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
CDC42SE1-207ENST00000540998 DDIT3P35638 169 aa12.97□□□□□ -0.33
CDC42SE1-207ENST00000540998 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
CDC42SE1-207ENST00000540998 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
CDC42SE1-207ENST00000540998 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
CDC42SE1-207ENST00000540998 SETBP1Q9Y6X0 1596 aa12.96□□□□□ -0.33
CDC42SE1-207ENST00000540998 ABCC11Q96J66 1382 aa12.96□□□□□ -0.33
CDC42SE1-207ENST00000540998 COL3A1P02461 1466 aaPredicted RBP12.96□□□□□ -0.33
CDC42SE1-207ENST00000540998 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.33
CDC42SE1-207ENST00000540998 PKP1Q13835 747 aa12.96□□□□□ -0.33
CDC42SE1-207ENST00000540998 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
CDC42SE1-207ENST00000540998 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.34
CDC42SE1-207ENST00000540998 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
CDC42SE1-207ENST00000540998 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
CDC42SE1-207ENST00000540998 MRE11P49959 708 aa12.95□□□□□ -0.34
CDC42SE1-207ENST00000540998 SIGLEC1Q9BZZ2 1709 aa12.95□□□□□ -0.34
CDC42SE1-207ENST00000540998 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
CDC42SE1-207ENST00000540998 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
CDC42SE1-207ENST00000540998 KIF16BQ96L93 1317 aa12.95□□□□□ -0.34
CDC42SE1-207ENST00000540998 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
CDC42SE1-207ENST00000540998 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
CDC42SE1-207ENST00000540998 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
CDC42SE1-207ENST00000540998 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
CDC42SE1-207ENST00000540998 IPO8O15397 1037 aaKnown RBP12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 VAMP4O75379 141 aa12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 FOXD4L5Q5VV16 416 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 FOXD4L4Q8WXT5 416 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 ZMYM3Q14202 1370 aa12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 SMARCA5O60264 1052 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 MBIPQ9NS73 344 aa12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 CLCN1P35523 988 aa12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 RAB3GAP1Q15042 981 aa12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 RRS1Q15050 365 aaKnown RBP12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
CDC42SE1-207ENST00000540998 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
CDC42SE1-207ENST00000540998 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
CDC42SE1-207ENST00000540998 ESPNB1AK53 854 aa12.92□□□□□ -0.34
CDC42SE1-207ENST00000540998 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-207ENST00000540998 ARAP3Q8WWN8 1544 aa12.92□□□□□ -0.34
CDC42SE1-207ENST00000540998 NCLP19338 710 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-207ENST00000540998 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
CDC42SE1-207ENST00000540998 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
CDC42SE1-207ENST00000540998 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE1-207ENST00000540998 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
CDC42SE1-207ENST00000540998 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
CDC42SE1-207ENST00000540998 NME9Q86XW9 330 aa12.91□□□□□ -0.34
CDC42SE1-207ENST00000540998 K7ELQ4 463 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE1-207ENST00000540998 NSD2O96028 1365 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms