RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 MS4A1P11836 297 aa14.69□□□□□ -0.06
LGR5-203ENST00000540815 CABP1Q9NZU7 370 aa14.68□□□□□ -0.06
LGR5-203ENST00000540815 KDM2BQ8NHM5 1336 aa14.68□□□□□ -0.06
LGR5-203ENST00000540815 TNRQ92752 1358 aa14.67□□□□□ -0.06
LGR5-203ENST00000540815 U2AF1L5P0DN76 240 aaPredicted RBP14.67□□□□□ -0.06
LGR5-203ENST00000540815 U2AF1Q01081 240 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■□□□□ 11.1
LGR5-203ENST00000540815 UBR1Q8IWV7 1749 aa14.67□□□□□ -0.06
LGR5-203ENST00000540815 BCAR3O75815 825 aa14.66□□□□□ -0.06
LGR5-203ENST00000540815 NEUROD2Q15784 382 aa14.66□□□□□ -0.06
LGR5-203ENST00000540815 HDGFP51858 240 aaKnown RBP14.65□□□□□ -0.06
LGR5-203ENST00000540815 CENPQQ7L2Z9 268 aaPredicted RBP14.65□□□□□ -0.06
LGR5-203ENST00000540815 TECPR2O15040 1411 aa14.65□□□□□ -0.06
LGR5-203ENST00000540815 CPS1P31327 1500 aa14.65□□□□□ -0.06
LGR5-203ENST00000540815 FAM135BQ49AJ0 1406 aa14.65□□□□□ -0.06
LGR5-203ENST00000540815 FRAT1Q92837 279 aaPredicted RBP14.64□□□□□ -0.07
LGR5-203ENST00000540815 SIRT1Q96EB6 747 aa14.64□□□□□ -0.07
LGR5-203ENST00000540815 PNPLA6Q8IY17 1366 aa14.64□□□□□ -0.07
LGR5-203ENST00000540815 PDE3AQ14432 1141 aa14.63□□□□□ -0.07
LGR5-203ENST00000540815 TXNDC2Q86VQ3 553 aa14.63□□□□□ -0.07
LGR5-203ENST00000540815 PLEKHF1Q96S99 279 aa14.63□□□□□ -0.07
LGR5-203ENST00000540815 CDC42BPGQ6DT37 1551 aa14.63□□□□□ -0.07
LGR5-203ENST00000540815 PDE4AP27815 886 aa14.62□□□□□ -0.07
LGR5-203ENST00000540815 TMEM2Q9UHN6 1383 aa14.62□□□□□ -0.07
LGR5-203ENST00000540815 CPSF1Q10570 1443 aaKnown RBP14.62□□□□□ -0.07
LGR5-203ENST00000540815 WASLO00401 505 aaPredicted RBP14.62□□□□□ -0.07
LGR5-203ENST00000540815 MYH16Q9H6N6 1097 aa14.61□□□□□ -0.07
LGR5-203ENST00000540815 GSE1Q14687 1217 aa14.61□□□□□ -0.07
LGR5-203ENST00000540815 BACH2Q9BYV9 841 aa14.61□□□□□ -0.07
LGR5-203ENST00000540815 EDC4Q6P2E9 1401 aaKnown RBP14.61□□□□□ -0.07
LGR5-203ENST00000540815 U2SURPO15042 1029 aaKnown RBP14.61□□□□□ -0.07
LGR5-203ENST00000540815 RARSP54136 660 aaKnown RBP14.61□□□□□ -0.07
LGR5-203ENST00000540815 MON2Q7Z3U7 1717 aa14.6□□□□□ -0.07
LGR5-203ENST00000540815 PPIP5K1Q6PFW1 1433 aa14.6□□□□□ -0.07
LGR5-203ENST00000540815 ADAMTS13Q76LX8 1427 aa14.6□□□□□ -0.07
LGR5-203ENST00000540815 FBLN1P23142 703 aa14.6□□□□□ -0.07
LGR5-203ENST00000540815 DIAPH1O60610 1272 aaKnown RBP14.6□□□□□ -0.07
LGR5-203ENST00000540815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■■■■□ 20.9
LGR5-203ENST00000540815 NCKAP5LQ9HCH0 1330 aa14.59□□□□□ -0.07
LGR5-203ENST00000540815 AKAP12Q02952 1782 aa14.59□□□□□ -0.07
LGR5-203ENST00000540815 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
LGR5-203ENST00000540815 MAP2P11137 1827 aaKnown RBP14.59□□□□□ -0.07
LGR5-203ENST00000540815 TMPOP42166 694 aaKnown RBP14.58□□□□□ -0.08
LGR5-203ENST00000540815 CEBPAP49715 358 aaPredicted RBP14.58□□□□□ -0.08
LGR5-203ENST00000540815 ARXQ96QS3 562 aa14.58□□□□□ -0.08
LGR5-203ENST00000540815 ITSN1Q15811 1721 aa14.58□□□□□ -0.08
LGR5-203ENST00000540815 MAPK8IP3Q9UPT6 1336 aa14.58□□□□□ -0.08
LGR5-203ENST00000540815 CANXP27824 592 aaKnown RBP14.58□□□□□ -0.08
LGR5-203ENST00000540815 LTKP29376 864 aa14.58□□□□□ -0.08
LGR5-203ENST00000540815 NFKBIBQ15653 356 aa14.57□□□□□ -0.08
LGR5-203ENST00000540815 ROBO2Q9HCK4 1378 aa14.57□□□□□ -0.08
LGR5-203ENST00000540815 CT47B1P0C2W7 299 aaPredicted RBP14.56□□□□□ -0.08
LGR5-203ENST00000540815 PKNOX2Q96KN3 472 aa14.56□□□□□ -0.08
LGR5-203ENST00000540815 NUDT16Q96DE0 195 aaKnown RBP14.56□□□□□ -0.08
LGR5-203ENST00000540815 POLKQ9UBT6 870 aa14.56□□□□□ -0.08
LGR5-203ENST00000540815 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
LGR5-203ENST00000540815 PLEKHG1Q9ULL1 1385 aa14.56□□□□□ -0.08
LGR5-203ENST00000540815 IL16Q14005 1332 aa14.56□□□□□ -0.08
LGR5-203ENST00000540815 PRR36Q9H6K5 1346 aa14.56□□□□□ -0.08
LGR5-203ENST00000540815 C3P01024 1663 aa14.56□□□□□ -0.08
LGR5-203ENST00000540815 ZRANB1Q9UGI0 708 aa14.56□□□□□ -0.08
LGR5-203ENST00000540815 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.55□□□□□ -0.08
LGR5-203ENST00000540815 AAMPQ13685 434 aa14.55□□□□□ -0.08
LGR5-203ENST00000540815 LRRC7Q96NW7 1537 aa14.55□□□□□ -0.08
LGR5-203ENST00000540815 NME9Q86XW9 330 aa14.55□□□□□ -0.08
LGR5-203ENST00000540815 PANK1Q8TE04 598 aa14.55□□□□□ -0.08
LGR5-203ENST00000540815 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
LGR5-203ENST00000540815 FCHSD2O94868 740 aa14.54□□□□□ -0.08
LGR5-203ENST00000540815 AATKQ6ZMQ8 1374 aa14.54□□□□□ -0.08
LGR5-203ENST00000540815 CLUAP1Q96AJ1 413 aa14.54□□□□□ -0.08
LGR5-203ENST00000540815 TNNQ9UQP3 1299 aa14.54□□□□□ -0.08
LGR5-203ENST00000540815 COG6Q9Y2V7 657 aa14.53□□□□□ -0.08
LGR5-203ENST00000540815 CDK12Q9NYV4 1490 aaPredicted RBP14.53□□□□□ -0.08
LGR5-203ENST00000540815 TOPAZ1Q8N9V7 1692 aa14.53□□□□□ -0.08
LGR5-203ENST00000540815 PTPRUQ92729 1446 aa14.53□□□□□ -0.08
LGR5-203ENST00000540815 RIPK4P57078 832 aa14.52□□□□□ -0.09
LGR5-203ENST00000540815 RSPH6AQ9H0K4 717 aa14.52□□□□□ -0.09
LGR5-203ENST00000540815 TSR2Q969E8 191 aaKnown RBP14.51□□□□□ -0.09
LGR5-203ENST00000540815 BCL2L13Q9BXK5 485 aa14.51□□□□□ -0.09
LGR5-203ENST00000540815 EMILIN1Q9Y6C2 1016 aa14.51□□□□□ -0.09
LGR5-203ENST00000540815 SLIT1O75093 1534 aa14.51□□□□□ -0.09
LGR5-203ENST00000540815 FRAT2O75474 233 aaPredicted RBP14.51□□□□□ -0.09
LGR5-203ENST00000540815 RLBP1P12271 317 aa14.51□□□□□ -0.09
LGR5-203ENST00000540815 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
LGR5-203ENST00000540815 NRKQ7Z2Y5 1582 aa14.51□□□□□ -0.09
LGR5-203ENST00000540815 FER1L4A9Z1Z3 1794 aa14.51□□□□□ -0.09
LGR5-203ENST00000540815 IGHDP01880 384 aa14.5□□□□□ -0.09
LGR5-203ENST00000540815 ARHGAP23Q9P227 1491 aa14.5□□□□□ -0.09
LGR5-203ENST00000540815 USP35Q9P2H5 1018 aa14.5□□□□□ -0.09
LGR5-203ENST00000540815 PPM1GO15355 546 aaPredicted RBP14.5□□□□□ -0.09
LGR5-203ENST00000540815 EXOSC9Q06265 439 aaKnown RBP14.49□□□□□ -0.09
LGR5-203ENST00000540815 COG3Q96JB2 828 aa14.49□□□□□ -0.09
LGR5-203ENST00000540815 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
LGR5-203ENST00000540815 PRKAR2BP31323 418 aa14.49□□□□□ -0.09
LGR5-203ENST00000540815 IL13P35225 146 aa14.48□□□□□ -0.09
LGR5-203ENST00000540815 FAM161AQ3B820 660 aa14.48□□□□□ -0.09
LGR5-203ENST00000540815 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
LGR5-203ENST00000540815 VSIG10Q8N0Z9 540 aa14.48□□□□□ -0.09
LGR5-203ENST00000540815 EID1Q9Y6B2 187 aa14.47□□□□□ -0.09
LGR5-203ENST00000540815 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
LGR5-203ENST00000540815 PMFBP1Q8TBY8 1022 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms