RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SH3D19Q5HYK7 790 aa8.57□□□□□ -1.04
MDM2-227ENST00000540709 EHBP1Q8NDI1 1231 aa8.57□□□□□ -1.04
MDM2-227ENST00000540709 LCE2BO14633 110 aa8.56□□□□□ -1.04
MDM2-227ENST00000540709 DGAT1O75907 488 aa8.56□□□□□ -1.04
MDM2-227ENST00000540709 BRPF1P55201 1214 aaPredicted RBP8.56□□□□□ -1.04
MDM2-227ENST00000540709 SH3BP2P78314 561 aa8.55□□□□□ -1.04
MDM2-227ENST00000540709 SNIP1Q8TAD8 396 aaKnown RBP8.55□□□□□ -1.04
MDM2-227ENST00000540709 TOR4AQ9NXH8 423 aa8.55□□□□□ -1.04
MDM2-227ENST00000540709 CTDSPL2Q05D32 466 aa8.54□□□□□ -1.04
MDM2-227ENST00000540709 AGERQ15109 404 aa8.54□□□□□ -1.04
MDM2-227ENST00000540709 J3QL48 77 aa8.53□□□□□ -1.04
MDM2-227ENST00000540709 AP1G2O75843 785 aa8.53□□□□□ -1.04
MDM2-227ENST00000540709 ALDH1A1P00352 501 aa8.53□□□□□ -1.04
MDM2-227ENST00000540709 MYT1Q01538 1121 aa8.53□□□□□ -1.04
MDM2-227ENST00000540709 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
MDM2-227ENST00000540709 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
MDM2-227ENST00000540709 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
MDM2-227ENST00000540709 ZNF511Q8NB15 262 aa8.52□□□□□ -1.05
MDM2-227ENST00000540709 F12P00748 615 aaPredicted RBP8.5□□□□□ -1.05
MDM2-227ENST00000540709 SMPD1P17405 629 aa8.5□□□□□ -1.05
MDM2-227ENST00000540709 LRRN4Q8WUT4 740 aa8.5□□□□□ -1.05
MDM2-227ENST00000540709 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.5□□□□□ -1.05
MDM2-227ENST00000540709 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
MDM2-227ENST00000540709 WASF2Q9Y6W5 498 aa8.49□□□□□ -1.05
MDM2-227ENST00000540709 ARID5BQ14865 1188 aa8.48□□□□□ -1.05
MDM2-227ENST00000540709 ZNF787Q6DD87 383 aa8.48□□□□□ -1.05
MDM2-227ENST00000540709 AXIN1O15169 862 aa8.47□□□□□ -1.05
MDM2-227ENST00000540709 AAASQ9NRG9 546 aa8.47□□□□□ -1.05
MDM2-227ENST00000540709 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
MDM2-227ENST00000540709 SIAH2O43255 324 aa8.46□□□□□ -1.06
MDM2-227ENST00000540709 VARSP26640 1264 aaKnown RBP8.46□□□□□ -1.06
MDM2-227ENST00000540709 NR6A1Q15406 480 aa8.46□□□□□ -1.06
MDM2-227ENST00000540709 PPP2R2DQ66LE6 453 aa8.46□□□□□ -1.06
MDM2-227ENST00000540709 ARMC2Q8NEN0 867 aa8.46□□□□□ -1.06
MDM2-227ENST00000540709 HPS1Q92902 700 aa8.46□□□□□ -1.06
MDM2-227ENST00000540709 TLL2Q9Y6L7 1015 aa8.46□□□□□ -1.06
MDM2-227ENST00000540709 RFC5P40937 340 aa8.45□□□□□ -1.06
MDM2-227ENST00000540709 FAM174AQ8TBP5 190 aa8.45□□□□□ -1.06
MDM2-227ENST00000540709 CARD14Q9BXL6 1004 aa8.45□□□□□ -1.06
MDM2-227ENST00000540709 DACH1Q9UI36 760 aa8.45□□□□□ -1.06
MDM2-227ENST00000540709 NBPF14Q5TI25 921 aa8.44□□□□□ -1.06
MDM2-227ENST00000540709 BPHLQ86WA6 291 aaPredicted RBP8.44□□□□□ -1.06
MDM2-227ENST00000540709 AVPP01185 164 aa8.43□□□□□ -1.06
MDM2-227ENST00000540709 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
MDM2-227ENST00000540709 GOPCQ9HD26 462 aa8.43□□□□□ -1.06
MDM2-227ENST00000540709 POTECB2RU33 542 aa8.42□□□□□ -1.06
MDM2-227ENST00000540709 CTC1Q2NKJ3 1217 aa8.41□□□□□ -1.06
MDM2-227ENST00000540709 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
MDM2-227ENST00000540709 EPS8L1Q8TE68 723 aa8.41□□□□□ -1.06
MDM2-227ENST00000540709 HMX1Q9NP08 348 aaPredicted RBP8.4□□□□□ -1.06
MDM2-227ENST00000540709 FKBPLQ9UIM3 349 aa8.4□□□□□ -1.06
MDM2-227ENST00000540709 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
MDM2-227ENST00000540709 CAPN5O15484 640 aaPredicted RBP8.38□□□□□ -1.07
MDM2-227ENST00000540709 NNTQ13423 1086 aa8.38□□□□□ -1.07
MDM2-227ENST00000540709 CRIPAKQ8N1N5 446 aa8.38□□□□□ -1.07
MDM2-227ENST00000540709 ARHGAP9Q9BRR9 750 aa8.38□□□□□ -1.07
MDM2-227ENST00000540709 GMPR2Q9P2T1 348 aaKnown RBP8.38□□□□□ -1.07
MDM2-227ENST00000540709 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
MDM2-227ENST00000540709 ZBTB33Q86T24 672 aa8.37□□□□□ -1.07
MDM2-227ENST00000540709 PNMA1Q8ND90 353 aa8.37□□□□□ -1.07
MDM2-227ENST00000540709 C11orf95C9JLR9 678 aaPredicted RBP8.36□□□□□ -1.07
MDM2-227ENST00000540709 WDR4P57081 412 aaKnown RBP8.36□□□□□ -1.07
MDM2-227ENST00000540709 VASH1Q7L8A9 365 aaPredicted RBP8.36□□□□□ -1.07
MDM2-227ENST00000540709 SH3BP5LQ7L8J4 393 aa8.36□□□□□ -1.07
MDM2-227ENST00000540709 GPKOWQ92917 476 aaPredicted RBP eCLIP8.36□□□□□ -1.07
MDM2-227ENST00000540709 ATP13A2Q9NQ11 1180 aa8.36□□□□□ -1.07
MDM2-227ENST00000540709 ADH1CP00326 375 aa8.35□□□□□ -1.07
MDM2-227ENST00000540709 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
MDM2-227ENST00000540709 SH3RF1Q7Z6J0 888 aa8.35□□□□□ -1.07
MDM2-227ENST00000540709 BMP1P13497 986 aa8.34□□□□□ -1.07
MDM2-227ENST00000540709 PTK2Q05397 1052 aa8.34□□□□□ -1.07
MDM2-227ENST00000540709 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
MDM2-227ENST00000540709 MPNDQ8N594 471 aa8.34□□□□□ -1.07
MDM2-227ENST00000540709 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
MDM2-227ENST00000540709 FSHRP23945 695 aa8.33□□□□□ -1.08
MDM2-227ENST00000540709 GRM5P41594 1212 aa8.32□□□□□ -1.08
MDM2-227ENST00000540709 NR5A1Q13285 461 aa8.32□□□□□ -1.08
MDM2-227ENST00000540709 SLC10A4Q96EP9 437 aa8.32□□□□□ -1.08
MDM2-227ENST00000540709 C1QTNF2Q9BXJ5 285 aa8.32□□□□□ -1.08
MDM2-227ENST00000540709 ZC3H4Q9UPT8 1303 aaKnown RBP8.31□□□□□ -1.08
MDM2-227ENST00000540709 ZIC2O95409 532 aaPredicted RBP8.31□□□□□ -1.08
MDM2-227ENST00000540709 NR3C2P08235 984 aa8.31□□□□□ -1.08
MDM2-227ENST00000540709 RAB15P59190 212 aa8.31□□□□□ -1.08
MDM2-227ENST00000540709 ADAM32Q8TC27 787 aa8.31□□□□□ -1.08
MDM2-227ENST00000540709 TRIM34Q9BYJ4 488 aa8.31□□□□□ -1.08
MDM2-227ENST00000540709 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
MDM2-227ENST00000540709 ZNF775Q96BV0 537 aaPredicted RBP8.3□□□□□ -1.08
MDM2-227ENST00000540709 ITPKCQ96DU7 683 aa8.3□□□□□ -1.08
MDM2-227ENST00000540709 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
MDM2-227ENST00000540709 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
MDM2-227ENST00000540709 TIMP2P16035 220 aa8.29□□□□□ -1.08
MDM2-227ENST00000540709 DZIP3Q86Y13 1208 aaKnown RBP8.29□□□□□ -1.08
MDM2-227ENST00000540709 SNRPBP14678 240 aaKnown RBP8.28□□□□□ -1.08
MDM2-227ENST00000540709 TRIM46Q7Z4K8 759 aa8.28□□□□□ -1.08
MDM2-227ENST00000540709 TRMT44Q8IYL2 757 aaKnown RBP8.28□□□□□ -1.08
MDM2-227ENST00000540709 BANK1Q8NDB2 785 aa8.28□□□□□ -1.08
MDM2-227ENST00000540709 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
MDM2-227ENST00000540709 OCSTAMPQ9BR26 566 aa8.28□□□□□ -1.08
MDM2-227ENST00000540709 SCARF1Q14162 830 aa8.27□□□□□ -1.09
MDM2-227ENST00000540709 C6orf118Q5T5N4 469 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms