RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PLEKHF1Q96S99 279 aa15.63■□□□□ 0.09
NPC1-202ENST00000540608 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
NPC1-202ENST00000540608 SLC52A1Q9NWF4 448 aa15.63■□□□□ 0.09
NPC1-202ENST00000540608 ZFYVE9O95405 1425 aa15.63■□□□□ 0.09
NPC1-202ENST00000540608 TBC1D2Q9BYX2 928 aa15.62■□□□□ 0.09
NPC1-202ENST00000540608 A0A1W2PP64 1363 aa15.61■□□□□ 0.09
NPC1-202ENST00000540608 HDAC1Q13547 482 aaPredicted RBP15.61■□□□□ 0.09
NPC1-202ENST00000540608 TSR2Q969E8 191 aaKnown RBP15.61■□□□□ 0.09
NPC1-202ENST00000540608 TMEM131LA2VDJ0 1609 aa15.61■□□□□ 0.09
NPC1-202ENST00000540608 ABCC11Q96J66 1382 aa15.61■□□□□ 0.09
NPC1-202ENST00000540608 PREX1Q8TCU6 1659 aa15.61■□□□□ 0.09
NPC1-202ENST00000540608 TMPOP42166 694 aaKnown RBP15.6■□□□□ 0.09
NPC1-202ENST00000540608 EXOSC9Q06265 439 aaKnown RBP15.6■□□□□ 0.09
NPC1-202ENST00000540608 SMC4Q9NTJ3 1288 aa15.6■□□□□ 0.09
NPC1-202ENST00000540608 SRPK2P78362 688 aaKnown RBP15.6■□□□□ 0.09
NPC1-202ENST00000540608 TRIM35Q9UPQ4 493 aa15.6■□□□□ 0.09
NPC1-202ENST00000540608 POGKQ9P215 609 aa15.59■□□□□ 0.09
NPC1-202ENST00000540608 IL16Q14005 1332 aa15.59■□□□□ 0.09
NPC1-202ENST00000540608 PTPRMP28827 1452 aa15.59■□□□□ 0.09
NPC1-202ENST00000540608 TRIM27P14373 513 aa15.59■□□□□ 0.09
NPC1-202ENST00000540608 DDX19BQ9UMR2 479 aa15.59■□□□□ 0.09
NPC1-202ENST00000540608 U2SURPO15042 1029 aaKnown RBP15.58■□□□□ 0.08
NPC1-202ENST00000540608 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.08
NPC1-202ENST00000540608 SSH1Q8WYL5 1049 aa15.58■□□□□ 0.08
NPC1-202ENST00000540608 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
NPC1-202ENST00000540608 COL3A1P02461 1466 aaPredicted RBP15.58■□□□□ 0.08
NPC1-202ENST00000540608 MINK1Q8N4C8 1332 aaPredicted RBP15.58■□□□□ 0.08
NPC1-202ENST00000540608 ATF7IPQ6VMQ6 1270 aa15.58■□□□□ 0.08
NPC1-202ENST00000540608 PRAM1Q96QH2 718 aa15.58■□□□□ 0.08
NPC1-202ENST00000540608 TSPOAP1O95153 1857 aa15.57■□□□□ 0.08
NPC1-202ENST00000540608 C22orf23Q9BZE7 217 aa15.56■□□□□ 0.08
NPC1-202ENST00000540608 YTHDC2Q9H6S0 1430 aaKnown RBP15.56■□□□□ 0.08
NPC1-202ENST00000540608 ITPRIPQ8IWB1 547 aa15.55■□□□□ 0.08
NPC1-202ENST00000540608 SMC5Q8IY18 1101 aa15.55■□□□□ 0.08
NPC1-202ENST00000540608 NOB1Q9ULX3 412 aaKnown RBP15.55■□□□□ 0.08
NPC1-202ENST00000540608 MED14O60244 1454 aa15.55■□□□□ 0.08
NPC1-202ENST00000540608 CD163L1Q9NR16 1453 aa15.55■□□□□ 0.08
NPC1-202ENST00000540608 FYB1O15117 783 aa15.55■□□□□ 0.08
NPC1-202ENST00000540608 TERF2IPQ9NYB0 399 aa15.54■□□□□ 0.08
NPC1-202ENST00000540608 FAM43AQ8N2R8 423 aa15.54■□□□□ 0.08
NPC1-202ENST00000540608 PNNQ9H307 717 aaKnown RBP15.54■□□□□ 0.08
NPC1-202ENST00000540608 ATAD2Q6PL18 1390 aa15.54■□□□□ 0.08
NPC1-202ENST00000540608 RIPK4P57078 832 aa15.53■□□□□ 0.08
NPC1-202ENST00000540608 L1TD1Q5T7N2 865 aaKnown RBP15.53■□□□□ 0.08
NPC1-202ENST00000540608 IPO8O15397 1037 aaKnown RBP15.53■□□□□ 0.08
NPC1-202ENST00000540608 ZBTB40Q9NUA8 1239 aa15.53■□□□□ 0.08
NPC1-202ENST00000540608 ANKRD26Q9UPS8 1709 aa15.52■□□□□ 0.08
NPC1-202ENST00000540608 CLTCQ00610 1675 aaKnown RBP15.52■□□□□ 0.08
NPC1-202ENST00000540608 MFAP1P55081 439 aaKnown RBP15.52■□□□□ 0.08
NPC1-202ENST00000540608 TMEM57Q8N5G2 664 aa15.52■□□□□ 0.08
NPC1-202ENST00000540608 ALKQ9UM73 1620 aa15.52■□□□□ 0.07
NPC1-202ENST00000540608 PNPLA6Q8IY17 1366 aa15.52■□□□□ 0.07
NPC1-202ENST00000540608 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.07
NPC1-202ENST00000540608 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
NPC1-202ENST00000540608 ALDH1L2Q3SY69 923 aa15.51■□□□□ 0.07
NPC1-202ENST00000540608 MCM4P33991 863 aa15.5■□□□□ 0.07
NPC1-202ENST00000540608 CHMP5Q9NZZ3 219 aa15.5■□□□□ 0.07
NPC1-202ENST00000540608 CDK19Q9BWU1 502 aa15.5■□□□□ 0.07
NPC1-202ENST00000540608 ARHGEF40Q8TER5 1519 aa15.49■□□□□ 0.07
NPC1-202ENST00000540608 NUCB1Q02818 461 aa15.49■□□□□ 0.07
NPC1-202ENST00000540608 SPRYD3Q8NCJ5 442 aa15.49■□□□□ 0.07
NPC1-202ENST00000540608 CABP1Q9NZU7 370 aa15.49■□□□□ 0.07
NPC1-202ENST00000540608 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
NPC1-202ENST00000540608 FCHSD2O94868 740 aa15.48■□□□□ 0.07
NPC1-202ENST00000540608 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
NPC1-202ENST00000540608 BRPF1P55201 1214 aaPredicted RBP15.47■□□□□ 0.07
NPC1-202ENST00000540608 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
NPC1-202ENST00000540608 REREQ9P2R6 1566 aa15.46■□□□□ 0.07
NPC1-202ENST00000540608 RBM25P49756 843 aaKnown RBP15.46■□□□□ 0.07
NPC1-202ENST00000540608 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.46■□□□□ 0.07
NPC1-202ENST00000540608 WAPLQ7Z5K2 1190 aa15.46■□□□□ 0.06
NPC1-202ENST00000540608 HSCBQ8IWL3 235 aa15.46■□□□□ 0.06
NPC1-202ENST00000540608 CDC42BPGQ6DT37 1551 aa15.45■□□□□ 0.06
NPC1-202ENST00000540608 FSD2A1L4K1 749 aa15.45■□□□□ 0.06
NPC1-202ENST00000540608 CHD1LQ86WJ1 897 aa15.45■□□□□ 0.06
NPC1-202ENST00000540608 FBLN1P23142 703 aa15.44■□□□□ 0.06
NPC1-202ENST00000540608 SNX21Q969T3 373 aa15.44■□□□□ 0.06
NPC1-202ENST00000540608 GOLGA6L3A6NEY3 463 aa15.44■□□□□ 0.06
NPC1-202ENST00000540608 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
NPC1-202ENST00000540608 A2ML1A8K2U0 1454 aa15.44■□□□□ 0.06
NPC1-202ENST00000540608 PPIP5K1Q6PFW1 1433 aa15.44■□□□□ 0.06
NPC1-202ENST00000540608 KIF20BQ96Q89 1820 aa15.44■□□□□ 0.06
NPC1-202ENST00000540608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.43■□□□□ 0.06
NPC1-202ENST00000540608 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
NPC1-202ENST00000540608 TRAK2O60296 914 aa15.43■□□□□ 0.06
NPC1-202ENST00000540608 LNPKQ9C0E8 428 aa15.43■□□□□ 0.06
NPC1-202ENST00000540608 CHMP4BQ9H444 224 aaKnown RBP15.43■□□□□ 0.06
NPC1-202ENST00000540608 FAM135BQ49AJ0 1406 aa15.42■□□□□ 0.06
NPC1-202ENST00000540608 NCOA3Q9Y6Q9 1424 aa15.42■□□□□ 0.06
NPC1-202ENST00000540608 ARHGAP45Q92619 1136 aa15.42■□□□□ 0.06
NPC1-202ENST00000540608 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
NPC1-202ENST00000540608 XRCC6P12956 609 aaKnown RBP eCLIP15.42■□□□□ 0.06
NPC1-202ENST00000540608 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
NPC1-202ENST00000540608 DDIT3P35638 169 aa15.42■□□□□ 0.06
NPC1-202ENST00000540608 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
NPC1-202ENST00000540608 BMP2KLQ5H9B9 411 aa15.41■□□□□ 0.06
NPC1-202ENST00000540608 AGLP35573 1532 aa15.41■□□□□ 0.06
NPC1-202ENST00000540608 GCC1Q96CN9 775 aa15.41■□□□□ 0.06
NPC1-202ENST00000540608 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
NPC1-202ENST00000540608 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms