RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 ADGRB1O14514 1584 aa20.06■□□□□ 0.8
CACFD1-206ENST00000540581 KIDINS220Q9ULH0 1771 aa20.05■□□□□ 0.8
CACFD1-206ENST00000540581 GOLGA6L3A6NEY3 463 aa20.05■□□□□ 0.8
CACFD1-206ENST00000540581 ANKRD45Q5TZF3 282 aa20.05■□□□□ 0.8
CACFD1-206ENST00000540581 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
CACFD1-206ENST00000540581 XRCC6P12956 609 aaKnown RBP eCLIP20.04■□□□□ 0.8
CACFD1-206ENST00000540581 PRKAR2BP31323 418 aa20.04■□□□□ 0.8
CACFD1-206ENST00000540581 FAM43AQ8N2R8 423 aa20.04■□□□□ 0.8
CACFD1-206ENST00000540581 TULP4Q9NRJ4 1543 aa20.04■□□□□ 0.8
CACFD1-206ENST00000540581 TRAK2O60296 914 aa20.04■□□□□ 0.8
CACFD1-206ENST00000540581 ARAP3Q8WWN8 1544 aa20.03■□□□□ 0.8
CACFD1-206ENST00000540581 CHMP5Q9NZZ3 219 aa20.03■□□□□ 0.8
CACFD1-206ENST00000540581 IFT172Q9UG01 1749 aa20.03■□□□□ 0.8
CACFD1-206ENST00000540581 L1TD1Q5T7N2 865 aaKnown RBP20.03■□□□□ 0.8
CACFD1-206ENST00000540581 HDAC1Q13547 482 aaPredicted RBP20.02■□□□□ 0.8
CACFD1-206ENST00000540581 ZBTB40Q9NUA8 1239 aa20.02■□□□□ 0.8
CACFD1-206ENST00000540581 MYO3AQ8NEV4 1616 aa20.02■□□□□ 0.8
CACFD1-206ENST00000540581 HSP90AA1P07900 732 aaKnown RBP20.01■□□□□ 0.79
CACFD1-206ENST00000540581 TERF2IPQ9NYB0 399 aa20.01■□□□□ 0.79
CACFD1-206ENST00000540581 RPGRIP1LQ68CZ1 1315 aa20■□□□□ 0.79
CACFD1-206ENST00000540581 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
CACFD1-206ENST00000540581 TSPYL6Q8N831 410 aa20■□□□□ 0.79
CACFD1-206ENST00000540581 STAG3Q9UJ98 1225 aa20■□□□□ 0.79
CACFD1-206ENST00000540581 SMC5Q8IY18 1101 aa20■□□□□ 0.79
CACFD1-206ENST00000540581 PHACTR3Q96KR7 559 aa20■□□□□ 0.79
CACFD1-206ENST00000540581 IPO8O15397 1037 aaKnown RBP19.99■□□□□ 0.79
CACFD1-206ENST00000540581 GLI2P10070 1586 aa19.99■□□□□ 0.79
CACFD1-206ENST00000540581 SETBP1Q9Y6X0 1596 aa19.99■□□□□ 0.79
CACFD1-206ENST00000540581 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
CACFD1-206ENST00000540581 CDK19Q9BWU1 502 aa19.99■□□□□ 0.79
CACFD1-206ENST00000540581 FBXO31Q5XUX0 539 aaPredicted RBP19.98■□□□□ 0.79
CACFD1-206ENST00000540581 CHD1LQ86WJ1 897 aa19.98■□□□□ 0.79
CACFD1-206ENST00000540581 HDGFL2Q7Z4V5 671 aaPredicted RBP19.98■□□□□ 0.79
CACFD1-206ENST00000540581 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
CACFD1-206ENST00000540581 PPLO60437 1756 aa19.96■□□□□ 0.79
CACFD1-206ENST00000540581 NUCB1Q02818 461 aa19.96■□□□□ 0.79
CACFD1-206ENST00000540581 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
CACFD1-206ENST00000540581 ABCC11Q96J66 1382 aa19.96■□□□□ 0.79
CACFD1-206ENST00000540581 KIF16BQ96L93 1317 aa19.96■□□□□ 0.79
CACFD1-206ENST00000540581 NSD2O96028 1365 aa19.96■□□□□ 0.79
CACFD1-206ENST00000540581 APBB1O00213 710 aa19.96■□□□□ 0.79
CACFD1-206ENST00000540581 CT47B1P0C2W7 299 aaPredicted RBP19.96■□□□□ 0.79
CACFD1-206ENST00000540581 ZRANB1Q9UGI0 708 aa19.96■□□□□ 0.79
CACFD1-206ENST00000540581 CD2BP2O95400 341 aaKnown RBP19.95■□□□□ 0.78
CACFD1-206ENST00000540581 EMILIN1Q9Y6C2 1016 aa19.95■□□□□ 0.78
CACFD1-206ENST00000540581 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
CACFD1-206ENST00000540581 DCTN1Q14203 1278 aa19.94■□□□□ 0.78
CACFD1-206ENST00000540581 ATAD2Q6PL18 1390 aa19.94■□□□□ 0.78
CACFD1-206ENST00000540581 ZC3H13Q5T200 1668 aaKnown RBP19.94■□□□□ 0.78
CACFD1-206ENST00000540581 FAM83GA6ND36 823 aa19.93■□□□□ 0.78
CACFD1-206ENST00000540581 CAMSAP1Q5T5Y3 1602 aa19.92■□□□□ 0.78
CACFD1-206ENST00000540581 TNPO1Q92973 898 aaKnown RBP19.92■□□□□ 0.78
CACFD1-206ENST00000540581 LMTK2Q8IWU2 1503 aa19.91■□□□□ 0.78
CACFD1-206ENST00000540581 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
CACFD1-206ENST00000540581 POGZQ7Z3K3 1410 aa19.91■□□□□ 0.78
CACFD1-206ENST00000540581 ABCC3O15438 1527 aa19.91■□□□□ 0.78
CACFD1-206ENST00000540581 POLKQ9UBT6 870 aa19.91■□□□□ 0.78
CACFD1-206ENST00000540581 NAP1L5Q96NT1 182 aaPredicted RBP19.9■□□□□ 0.78
CACFD1-206ENST00000540581 NCKAP5LQ9HCH0 1330 aa19.9■□□□□ 0.78
CACFD1-206ENST00000540581 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.78
CACFD1-206ENST00000540581 ZNF692Q9BU19 519 aaPredicted RBP19.89■□□□□ 0.78
CACFD1-206ENST00000540581 RSPH6AQ9H0K4 717 aa19.89■□□□□ 0.78
CACFD1-206ENST00000540581 ZBTB7BO15156 539 aaPredicted RBP19.89■□□□□ 0.77
CACFD1-206ENST00000540581 VAMP4O75379 141 aa19.89■□□□□ 0.77
CACFD1-206ENST00000540581 TBC1D9Q6ZT07 1266 aa19.89■□□□□ 0.77
CACFD1-206ENST00000540581 ADGRB2O60241 1585 aa19.89■□□□□ 0.77
CACFD1-206ENST00000540581 FCHSD2O94868 740 aa19.88■□□□□ 0.77
CACFD1-206ENST00000540581 NME9Q86XW9 330 aa19.88■□□□□ 0.77
CACFD1-206ENST00000540581 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
CACFD1-206ENST00000540581 FSD2A1L4K1 749 aa19.88■□□□□ 0.77
CACFD1-206ENST00000540581 MBIPQ9NS73 344 aa19.88■□□□□ 0.77
CACFD1-206ENST00000540581 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
CACFD1-206ENST00000540581 IL16Q14005 1332 aa19.87■□□□□ 0.77
CACFD1-206ENST00000540581 SIRT2Q8IXJ6 389 aa19.87■□□□□ 0.77
CACFD1-206ENST00000540581 MRPL50Q8N5N7 158 aaKnown RBP19.87■□□□□ 0.77
CACFD1-206ENST00000540581 C8orf58Q8NAV2 365 aa19.87■□□□□ 0.77
CACFD1-206ENST00000540581 PUS7Q96PZ0 661 aaKnown RBP19.87■□□□□ 0.77
CACFD1-206ENST00000540581 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
CACFD1-206ENST00000540581 COL3A1P02461 1466 aaPredicted RBP19.87■□□□□ 0.77
CACFD1-206ENST00000540581 SIGLEC1Q9BZZ2 1709 aa19.86■□□□□ 0.77
CACFD1-206ENST00000540581 PPIP5K1Q6PFW1 1433 aa19.86■□□□□ 0.77
CACFD1-206ENST00000540581 SOX12O15370 315 aa19.86■□□□□ 0.77
CACFD1-206ENST00000540581 MLECQ14165 292 aa19.86■□□□□ 0.77
CACFD1-206ENST00000540581 NEXMIFQ5QGS0 1516 aa19.86■□□□□ 0.77
CACFD1-206ENST00000540581 KRT24Q2M2I5 525 aa19.86■□□□□ 0.77
CACFD1-206ENST00000540581 TWISTNBQ3B726 338 aaPredicted RBP19.86■□□□□ 0.77
CACFD1-206ENST00000540581 C16orf71Q8IYS4 520 aaPredicted RBP19.86■□□□□ 0.77
CACFD1-206ENST00000540581 GRPEL1Q9HAV7 217 aa19.86■□□□□ 0.77
CACFD1-206ENST00000540581 DDX11L8A8MPP1 907 aa19.85■□□□□ 0.77
CACFD1-206ENST00000540581 RBM25P49756 843 aaKnown RBP19.85■□□□□ 0.77
CACFD1-206ENST00000540581 ALDH1L2Q3SY69 923 aa19.85■□□□□ 0.77
CACFD1-206ENST00000540581 NFE2L2Q16236 605 aa19.85■□□□□ 0.77
CACFD1-206ENST00000540581 GAS2L3Q86XJ1 694 aa19.85■□□□□ 0.77
CACFD1-206ENST00000540581 KIF2CQ99661 725 aa19.85■□□□□ 0.77
CACFD1-206ENST00000540581 USP32Q8NFA0 1604 aa19.84■□□□□ 0.77
CACFD1-206ENST00000540581 SSFA2P28290 1259 aa19.84■□□□□ 0.77
CACFD1-206ENST00000540581 NUTM2FA1L443 756 aa19.84■□□□□ 0.77
CACFD1-206ENST00000540581 BMP2KLQ5H9B9 411 aa19.84■□□□□ 0.77
CACFD1-206ENST00000540581 YTHDC2Q9H6S0 1430 aaKnown RBP19.83■□□□□ 0.77
CACFD1-206ENST00000540581 CD163L1Q9NR16 1453 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms