RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 FAM98CQ17RN3 349 aaKnown RBP6.81□□□□□ -1.32
TSG101-205ENST00000540555 LAPTM4BQ86VI4 370 aa6.81□□□□□ -1.32
TSG101-205ENST00000540555 PARP9Q8IXQ6 854 aa6.81□□□□□ -1.32
TSG101-205ENST00000540555 GPBP1L1Q9HC44 474 aaPredicted RBP6.81□□□□□ -1.32
TSG101-205ENST00000540555 DNAJB2P25686 324 aa6.8□□□□□ -1.32
TSG101-205ENST00000540555 MDM2Q00987 491 aaPredicted RBP6.8□□□□□ -1.32
TSG101-205ENST00000540555 NBPF3Q9H094 633 aa6.8□□□□□ -1.32
TSG101-205ENST00000540555 TMEM134Q9H6X4 195 aa6.8□□□□□ -1.32
TSG101-205ENST00000540555 C3P01024 1663 aa6.8□□□□□ -1.32
TSG101-205ENST00000540555 MRPL50Q8N5N7 158 aaKnown RBP6.79□□□□□ -1.32
TSG101-205ENST00000540555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.79□□□□□ -1.32
TSG101-205ENST00000540555 PLCH2O75038 1416 aa6.78□□□□□ -1.32
TSG101-205ENST00000540555 ARID3CA6NKF2 412 aa6.78□□□□□ -1.32
TSG101-205ENST00000540555 CLCN1P35523 988 aa6.78□□□□□ -1.32
TSG101-205ENST00000540555 NEUROD2Q15784 382 aa6.78□□□□□ -1.32
TSG101-205ENST00000540555 ZFRQ96KR1 1074 aaKnown RBP6.78□□□□□ -1.32
TSG101-205ENST00000540555 STAC3Q96MF2 364 aa6.78□□□□□ -1.32
TSG101-205ENST00000540555 KDM4CQ9H3R0 1056 aa6.78□□□□□ -1.32
TSG101-205ENST00000540555 GPCPD1Q9NPB8 672 aa6.78□□□□□ -1.32
TSG101-205ENST00000540555 DAXXQ9UER7 740 aaPredicted RBP6.78□□□□□ -1.32
TSG101-205ENST00000540555 NUP153P49790 1475 aaKnown RBP6.78□□□□□ -1.32
TSG101-205ENST00000540555 KDM5CP41229 1560 aa6.78□□□□□ -1.32
TSG101-205ENST00000540555 TTLL12Q14166 644 aaPredicted RBP6.77□□□□□ -1.33
TSG101-205ENST00000540555 SWT1Q5T5J6 900 aaKnown RBP6.77□□□□□ -1.33
TSG101-205ENST00000540555 GIGYF2Q6Y7W6 1299 aaKnown RBP6.77□□□□□ -1.33
TSG101-205ENST00000540555 IRX2Q9BZI1 471 aaPredicted RBP6.77□□□□□ -1.33
TSG101-205ENST00000540555 FAM217BQ9NTX9 383 aaPredicted RBP6.77□□□□□ -1.33
TSG101-205ENST00000540555 ZNF518AQ6AHZ1 1483 aa6.77□□□□□ -1.33
TSG101-205ENST00000540555 PLEKHD1A6NEE1 506 aa6.76□□□□□ -1.33
TSG101-205ENST00000540555 MS4A1P11836 297 aa6.76□□□□□ -1.33
TSG101-205ENST00000540555 SAMD7Q7Z3H4 446 aa6.76□□□□□ -1.33
TSG101-205ENST00000540555 FAM9AQ8IZU1 332 aaPredicted RBP6.76□□□□□ -1.33
TSG101-205ENST00000540555 KCTD12Q96CX2 325 aaKnown RBP6.76□□□□□ -1.33
TSG101-205ENST00000540555 ZMYM3Q14202 1370 aa6.76□□□□□ -1.33
TSG101-205ENST00000540555 MLH3Q9UHC1 1453 aa6.76□□□□□ -1.33
TSG101-205ENST00000540555 ZNF142P52746 1687 aaPredicted RBP6.76□□□□□ -1.33
TSG101-205ENST00000540555 VWDEQ8N2E2 1590 aa6.75□□□□□ -1.33
TSG101-205ENST00000540555 DIP2CQ9Y2E4 1556 aa6.75□□□□□ -1.33
TSG101-205ENST00000540555 SSTR3P32745 418 aaPredicted RBP6.75□□□□□ -1.33
TSG101-205ENST00000540555 CEP170BQ9Y4F5 1589 aaPredicted RBP6.74□□□□□ -1.33
TSG101-205ENST00000540555 ESF1Q9H501 851 aaKnown RBP6.74□□□□□ -1.33
TSG101-205ENST00000540555 FAM135BQ49AJ0 1406 aa6.74□□□□□ -1.33
TSG101-205ENST00000540555 NEURL4Q96JN8 1562 aa6.74□□□□□ -1.33
TSG101-205ENST00000540555 LRRC7Q96NW7 1537 aa6.73□□□□□ -1.33
TSG101-205ENST00000540555 SLC10A3P09131 477 aa6.73□□□□□ -1.33
TSG101-205ENST00000540555 EFCAB2Q5VUJ9 269 aa6.73□□□□□ -1.33
TSG101-205ENST00000540555 FAM117AQ9C073 453 aa6.73□□□□□ -1.33
TSG101-205ENST00000540555 MED14O60244 1454 aa6.73□□□□□ -1.33
TSG101-205ENST00000540555 RAPGEF6Q8TEU7 1601 aa6.72□□□□□ -1.33
TSG101-205ENST00000540555 MROH2AA6NES4 1674 aa6.72□□□□□ -1.33
TSG101-205ENST00000540555 CD46P15529 392 aa6.72□□□□□ -1.33
TSG101-205ENST00000540555 HDGFP51858 240 aaKnown RBP6.72□□□□□ -1.33
TSG101-205ENST00000540555 AFAP1Q8N556 730 aa6.72□□□□□ -1.33
TSG101-205ENST00000540555 A2ML1A8K2U0 1454 aa6.72□□□□□ -1.33
TSG101-205ENST00000540555 MYO3AQ8NEV4 1616 aa6.72□□□□□ -1.33
TSG101-205ENST00000540555 SETD1AO15047 1707 aaKnown RBP6.71□□□□□ -1.34
TSG101-205ENST00000540555 PLEKHG3A1L390 1219 aa6.71□□□□□ -1.34
TSG101-205ENST00000540555 SOWAHBA6NEL2 793 aa6.71□□□□□ -1.34
TSG101-205ENST00000540555 GOLGA8CPA6NN73 597 aa6.71□□□□□ -1.34
TSG101-205ENST00000540555 DDX11L8A8MPP1 907 aa6.71□□□□□ -1.34
TSG101-205ENST00000540555 SULF1Q8IWU6 871 aa6.71□□□□□ -1.34
TSG101-205ENST00000540555 WNT2BQ93097 391 aa6.71□□□□□ -1.34
TSG101-205ENST00000540555 RNF17Q9BXT8 1623 aaKnown RBP6.71□□□□□ -1.34
TSG101-205ENST00000540555 CDK12Q9NYV4 1490 aaPredicted RBP6.71□□□□□ -1.34
TSG101-205ENST00000540555 BCAMP50895 628 aa6.7□□□□□ -1.34
TSG101-205ENST00000540555 SLF2Q8IX21 1173 aa6.7□□□□□ -1.34
TSG101-205ENST00000540555 ANKK1Q8NFD2 765 aa6.7□□□□□ -1.34
TSG101-205ENST00000540555 LRCH3Q96II8 777 aa6.7□□□□□ -1.34
TSG101-205ENST00000540555 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.7□□□□□ -1.34
TSG101-205ENST00000540555 ABCA6Q8N139 1617 aa6.69□□□□□ -1.34
TSG101-205ENST00000540555 PRXQ9BXM0 1461 aa6.69□□□□□ -1.34
TSG101-205ENST00000540555 THSD4Q6ZMP0 1018 aa6.69□□□□□ -1.34
TSG101-205ENST00000540555 IL27Q8NEV9 243 aa6.69□□□□□ -1.34
TSG101-205ENST00000540555 BEGAINQ9BUH8 593 aa6.69□□□□□ -1.34
TSG101-205ENST00000540555 SAMD9Q5K651 1589 aa6.69□□□□□ -1.34
TSG101-205ENST00000540555 DNMT1P26358 1616 aaKnown RBP6.68□□□□□ -1.34
TSG101-205ENST00000540555 CTTNBP2Q8WZ74 1663 aa6.68□□□□□ -1.34
TSG101-205ENST00000540555 A0A0G2JS52 829 aa6.68□□□□□ -1.34
TSG101-205ENST00000540555 GCGRP47871 477 aa6.68□□□□□ -1.34
TSG101-205ENST00000540555 PTPN5P54829 565 aa6.68□□□□□ -1.34
TSG101-205ENST00000540555 SYNMO15061 1565 aa6.68□□□□□ -1.34
TSG101-205ENST00000540555 NPHP4O75161 1426 aaPredicted RBP6.67□□□□□ -1.34
TSG101-205ENST00000540555 ANKLE2Q86XL3 938 aa6.67□□□□□ -1.34
TSG101-205ENST00000540555 RDH13Q8NBN7 331 aa6.67□□□□□ -1.34
TSG101-205ENST00000540555 DDRGK1Q96HY6 314 aa6.67□□□□□ -1.34
TSG101-205ENST00000540555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.67□□□□□ -1.34
TSG101-205ENST00000540555 RNF40O75150 1001 aa6.66□□□□□ -1.34
TSG101-205ENST00000540555 ZNF772Q68DY9 489 aaPredicted RBP6.66□□□□□ -1.34
TSG101-205ENST00000540555 TSR3Q9UJK0 312 aaKnown RBP6.66□□□□□ -1.34
TSG101-205ENST00000540555 HPS5Q9UPZ3 1129 aa6.66□□□□□ -1.34
TSG101-205ENST00000540555 SLC4A3P48751 1232 aa6.65□□□□□ -1.34
TSG101-205ENST00000540555 PPP4CP60510 307 aa6.65□□□□□ -1.34
TSG101-205ENST00000540555 TMEM132AQ24JP5 1023 aa6.65□□□□□ -1.34
TSG101-205ENST00000540555 RSPH4AQ5TD94 716 aa6.65□□□□□ -1.34
TSG101-205ENST00000540555 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.34
TSG101-205ENST00000540555 WBP1LQ9NX94 342 aa6.65□□□□□ -1.34
TSG101-205ENST00000540555 JCADQ9P266 1359 aa6.65□□□□□ -1.35
TSG101-205ENST00000540555 CDK13Q14004 1512 aaKnown RBP6.65□□□□□ -1.35
TSG101-205ENST00000540555 DEPDC5O75140 1603 aa6.65□□□□□ -1.35
TSG101-205ENST00000540555 CFHP08603 1231 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms