RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 E9PSI1 815 aa19.5■□□□□ 0.71
TSFM-207ENST00000540550 PTCH1Q13635 1447 aa19.5■□□□□ 0.71
TSFM-207ENST00000540550 AMOTL2Q9Y2J4 779 aa19.49■□□□□ 0.71
TSFM-207ENST00000540550 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
TSFM-207ENST00000540550 MAP2P11137 1827 aaKnown RBP19.49■□□□□ 0.71
TSFM-207ENST00000540550 TCP11L2Q8N4U5 519 aa19.48■□□□□ 0.71
TSFM-207ENST00000540550 XRN1Q8IZH2 1706 aaKnown RBP19.47■□□□□ 0.71
TSFM-207ENST00000540550 TRMT2AQ8IZ69 625 aaKnown RBP19.47■□□□□ 0.71
TSFM-207ENST00000540550 ZNF692Q9BU19 519 aaPredicted RBP19.47■□□□□ 0.71
TSFM-207ENST00000540550 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
TSFM-207ENST00000540550 PRR36Q9H6K5 1346 aa19.47■□□□□ 0.71
TSFM-207ENST00000540550 U2SURPO15042 1029 aaKnown RBP19.47■□□□□ 0.71
TSFM-207ENST00000540550 WWC1Q8IX03 1113 aa19.47■□□□□ 0.71
TSFM-207ENST00000540550 NCKAP5LQ9HCH0 1330 aa19.46■□□□□ 0.71
TSFM-207ENST00000540550 DIAPH1O60610 1272 aaKnown RBP19.45■□□□□ 0.7
TSFM-207ENST00000540550 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
TSFM-207ENST00000540550 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
TSFM-207ENST00000540550 NME9Q86XW9 330 aa19.44■□□□□ 0.7
TSFM-207ENST00000540550 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
TSFM-207ENST00000540550 EXOC6Q8TAG9 804 aa19.43■□□□□ 0.7
TSFM-207ENST00000540550 NRKQ7Z2Y5 1582 aa19.43■□□□□ 0.7
TSFM-207ENST00000540550 NCBP3Q53F19 620 aaKnown RBP19.43■□□□□ 0.7
TSFM-207ENST00000540550 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
TSFM-207ENST00000540550 COG3Q96JB2 828 aa19.43■□□□□ 0.7
TSFM-207ENST00000540550 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
TSFM-207ENST00000540550 PIK3R4Q99570 1358 aa19.43■□□□□ 0.7
TSFM-207ENST00000540550 SETD1BQ9UPS6 1966 aaKnown RBP19.42■□□□□ 0.7
TSFM-207ENST00000540550 PLIN1O60240 522 aa19.42■□□□□ 0.7
TSFM-207ENST00000540550 CCDC27Q2M243 656 aa19.42■□□□□ 0.7
TSFM-207ENST00000540550 PNNQ9H307 717 aaKnown RBP19.42■□□□□ 0.7
TSFM-207ENST00000540550 MAPK8IP3Q9UPT6 1336 aa19.41■□□□□ 0.7
TSFM-207ENST00000540550 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
TSFM-207ENST00000540550 POLKQ9UBT6 870 aa19.41■□□□□ 0.7
TSFM-207ENST00000540550 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
TSFM-207ENST00000540550 PLEKHG3A1L390 1219 aa19.4■□□□□ 0.7
TSFM-207ENST00000540550 PPM1GO15355 546 aaPredicted RBP19.4■□□□□ 0.7
TSFM-207ENST00000540550 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
TSFM-207ENST00000540550 AATKQ6ZMQ8 1374 aa19.4■□□□□ 0.7
TSFM-207ENST00000540550 NUTM2FA1L443 756 aa19.39■□□□□ 0.7
TSFM-207ENST00000540550 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.7
TSFM-207ENST00000540550 CDK12Q9NYV4 1490 aaPredicted RBP19.39■□□□□ 0.69
TSFM-207ENST00000540550 ACEP12821 1306 aa19.39■□□□□ 0.69
TSFM-207ENST00000540550 RGPD8O14715 1765 aaPredicted RBP19.38■□□□□ 0.69
TSFM-207ENST00000540550 PLEKHF1Q96S99 279 aa19.37■□□□□ 0.69
TSFM-207ENST00000540550 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
TSFM-207ENST00000540550 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
TSFM-207ENST00000540550 USP6P35125 1406 aa19.37■□□□□ 0.69
TSFM-207ENST00000540550 TTC21BQ7Z4L5 1316 aa19.36■□□□□ 0.69
TSFM-207ENST00000540550 CRBNQ96SW2 442 aa19.36■□□□□ 0.69
TSFM-207ENST00000540550 LRRC7Q96NW7 1537 aa19.35■□□□□ 0.69
TSFM-207ENST00000540550 FMN2Q9NZ56 1722 aa19.35■□□□□ 0.69
TSFM-207ENST00000540550 KCNA6P17658 529 aa19.35■□□□□ 0.69
TSFM-207ENST00000540550 FBLN1P23142 703 aa19.35■□□□□ 0.69
TSFM-207ENST00000540550 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
TSFM-207ENST00000540550 NEFMP07197 916 aa19.34■□□□□ 0.69
TSFM-207ENST00000540550 MYH16Q9H6N6 1097 aa19.34■□□□□ 0.69
TSFM-207ENST00000540550 FCHSD2O94868 740 aa19.33■□□□□ 0.69
TSFM-207ENST00000540550 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.69
TSFM-207ENST00000540550 NALCNQ8IZF0 1738 aa19.33■□□□□ 0.69
TSFM-207ENST00000540550 ANKARQ7Z5J8 1434 aa19.33■□□□□ 0.69
TSFM-207ENST00000540550 OVOS2A0A0J9YW53 1432 aa19.31■□□□□ 0.68
TSFM-207ENST00000540550 OVOS2Q6IE36 1432 aa19.31■□□□□ 0.68
TSFM-207ENST00000540550 C20orf194Q5TEA3 1177 aa19.31■□□□□ 0.68
TSFM-207ENST00000540550 NGDNQ8NEJ9 315 aaKnown RBP19.3■□□□□ 0.68
TSFM-207ENST00000540550 TTC21AQ8NDW8 1320 aa19.3■□□□□ 0.68
TSFM-207ENST00000540550 RRS1Q15050 365 aaKnown RBP19.29■□□□□ 0.68
TSFM-207ENST00000540550 PMFBP1Q8TBY8 1022 aa19.29■□□□□ 0.68
TSFM-207ENST00000540550 BCAR3O75815 825 aa19.29■□□□□ 0.68
TSFM-207ENST00000540550 PRKAR2BP31323 418 aa19.29■□□□□ 0.68
TSFM-207ENST00000540550 RSPH6AQ9H0K4 717 aa19.29■□□□□ 0.68
TSFM-207ENST00000540550 SSH2Q76I76 1423 aa19.28■□□□□ 0.68
TSFM-207ENST00000540550 IL13P35225 146 aa19.28■□□□□ 0.68
TSFM-207ENST00000540550 RIPK4P57078 832 aa19.28■□□□□ 0.68
TSFM-207ENST00000540550 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.68
TSFM-207ENST00000540550 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
TSFM-207ENST00000540550 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.67
TSFM-207ENST00000540550 TRIM35Q9UPQ4 493 aa19.27■□□□□ 0.67
TSFM-207ENST00000540550 IL16Q14005 1332 aa19.26■□□□□ 0.67
TSFM-207ENST00000540550 HMOX1P09601 288 aa19.25■□□□□ 0.67
TSFM-207ENST00000540550 USP31Q70CQ4 1352 aa19.24■□□□□ 0.67
TSFM-207ENST00000540550 PIK3C2AO00443 1686 aa19.23■□□□□ 0.67
TSFM-207ENST00000540550 FANCIQ9NVI1 1328 aa19.23■□□□□ 0.67
TSFM-207ENST00000540550 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
TSFM-207ENST00000540550 PEAK1Q9H792 1746 aa19.22■□□□□ 0.67
TSFM-207ENST00000540550 CT47B1P0C2W7 299 aaPredicted RBP19.22■□□□□ 0.67
TSFM-207ENST00000540550 NFE2L2Q16236 605 aa19.22■□□□□ 0.67
TSFM-207ENST00000540550 PDE3AQ14432 1141 aa19.21■□□□□ 0.67
TSFM-207ENST00000540550 DLG5Q8TDM6 1919 aa19.21■□□□□ 0.67
TSFM-207ENST00000540550 TSR2Q969E8 191 aaKnown RBP19.2■□□□□ 0.66
TSFM-207ENST00000540550 ADGRL3Q9HAR2 1447 aa19.2■□□□□ 0.66
TSFM-207ENST00000540550 USP54Q70EL1 1684 aa19.19■□□□□ 0.66
TSFM-207ENST00000540550 SOX12O15370 315 aa19.19■□□□□ 0.66
TSFM-207ENST00000540550 CALD1Q05682 793 aaKnown RBP19.19■□□□□ 0.66
TSFM-207ENST00000540550 FRAT1Q92837 279 aaPredicted RBP19.19■□□□□ 0.66
TSFM-207ENST00000540550 PHACTR3Q96KR7 559 aa19.19■□□□□ 0.66
TSFM-207ENST00000540550 EIF4A2Q14240 407 aaKnown RBP19.18■□□□□ 0.66
TSFM-207ENST00000540550 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
TSFM-207ENST00000540550 EXOSC9Q06265 439 aaKnown RBP19.17■□□□□ 0.66
TSFM-207ENST00000540550 LMOD3Q0VAK6 560 aa19.17■□□□□ 0.66
TSFM-207ENST00000540550 RGPD1P0DJD0 1748 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms