RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 NSD2O96028 1365 aa14.13□□□□□ -0.15
PPFIBP1-212ENST00000540503 FOXO3O43524 673 aa14.13□□□□□ -0.15
PPFIBP1-212ENST00000540503 CGNL1Q0VF96 1302 aa14.13□□□□□ -0.15
PPFIBP1-212ENST00000540503 USP54Q70EL1 1684 aa14.12□□□□□ -0.15
PPFIBP1-212ENST00000540503 TNS3Q68CZ2 1445 aa14.12□□□□□ -0.15
PPFIBP1-212ENST00000540503 PIK3C2AO00443 1686 aa14.11□□□□□ -0.15
PPFIBP1-212ENST00000540503 ALS2Q96Q42 1657 aa14.11□□□□□ -0.15
PPFIBP1-212ENST00000540503 SSH2Q76I76 1423 aa14.11□□□□□ -0.15
PPFIBP1-212ENST00000540503 KRT28Q7Z3Y7 464 aa14.11□□□□□ -0.15
PPFIBP1-212ENST00000540503 TTC21BQ7Z4L5 1316 aa14.11□□□□□ -0.15
PPFIBP1-212ENST00000540503 COL16A1Q07092 1604 aaPredicted RBP14.1□□□□□ -0.15
PPFIBP1-212ENST00000540503 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
PPFIBP1-212ENST00000540503 ARHGEF10O15013 1369 aa14.09□□□□□ -0.15
PPFIBP1-212ENST00000540503 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
PPFIBP1-212ENST00000540503 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
PPFIBP1-212ENST00000540503 CARD14Q9BXL6 1004 aa14.09□□□□□ -0.15
PPFIBP1-212ENST00000540503 XPCQ01831 940 aaPredicted RBP14.08□□□□□ -0.16
PPFIBP1-212ENST00000540503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.08□□□□□ -0.16
PPFIBP1-212ENST00000540503 MED1Q15648 1581 aaPredicted RBP14.08□□□□□ -0.16
PPFIBP1-212ENST00000540503 DDX17Q92841 729 aaKnown RBP14.07□□□□□ -0.16
PPFIBP1-212ENST00000540503 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
PPFIBP1-212ENST00000540503 SPATA31A3Q5VYP0 1347 aa14.06□□□□□ -0.16
PPFIBP1-212ENST00000540503 USP31Q70CQ4 1352 aa14.06□□□□□ -0.16
PPFIBP1-212ENST00000540503 COL22A1Q8NFW1 1626 aaPredicted RBP14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 SHPRHQ149N8 1683 aa14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 MARF1Q9Y4F3 1742 aaKnown RBP14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 LMOD2Q6P5Q4 547 aa14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 ABTB2Q8N961 1025 aa14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 LRRC59Q96AG4 307 aaKnown RBP14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 COG3Q96JB2 828 aa14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
PPFIBP1-212ENST00000540503 PHRF1Q9P1Y6 1649 aaKnown RBP14.04□□□□□ -0.16
PPFIBP1-212ENST00000540503 NME9Q86XW9 330 aa14.04□□□□□ -0.16
PPFIBP1-212ENST00000540503 ABCA3Q99758 1704 aa14.04□□□□□ -0.16
PPFIBP1-212ENST00000540503 FYB1O15117 783 aa14.03□□□□□ -0.16
PPFIBP1-212ENST00000540503 DIEXFQ68CQ4 756 aaKnown RBP14.03□□□□□ -0.16
PPFIBP1-212ENST00000540503 NLRP13Q86W25 1043 aa14.03□□□□□ -0.16
PPFIBP1-212ENST00000540503 SLIT3O75094 1523 aa14.03□□□□□ -0.16
PPFIBP1-212ENST00000540503 CRYBG1Q9Y4K1 1723 aa14.03□□□□□ -0.16
PPFIBP1-212ENST00000540503 ANP32CO43423 234 aa14.02□□□□□ -0.17
PPFIBP1-212ENST00000540503 NLRP6P59044 892 aa14.02□□□□□ -0.17
PPFIBP1-212ENST00000540503 CC2D1BQ5T0F9 858 aaKnown RBP14.02□□□□□ -0.17
PPFIBP1-212ENST00000540503 FBXO41Q8TF61 875 aa14.02□□□□□ -0.17
PPFIBP1-212ENST00000540503 GGNBP2Q9H3C7 697 aa14.02□□□□□ -0.17
PPFIBP1-212ENST00000540503 JCADQ9P266 1359 aa14.01□□□□□ -0.17
PPFIBP1-212ENST00000540503 USP19O94966 1318 aa14.01□□□□□ -0.17
PPFIBP1-212ENST00000540503 MORC1Q86VD1 984 aa14.01□□□□□ -0.17
PPFIBP1-212ENST00000540503 PNPLA6Q8IY17 1366 aa14□□□□□ -0.17
PPFIBP1-212ENST00000540503 PARD3Q8TEW0 1356 aa14□□□□□ -0.17
PPFIBP1-212ENST00000540503 RALBP1Q15311 655 aa14□□□□□ -0.17
PPFIBP1-212ENST00000540503 NUTM2GQ5VZR2 741 aa13.99□□□□□ -0.17
PPFIBP1-212ENST00000540503 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
PPFIBP1-212ENST00000540503 NFAT5O94916 1531 aa13.99□□□□□ -0.17
PPFIBP1-212ENST00000540503 HSPA1LP34931 641 aa13.98□□□□□ -0.17
PPFIBP1-212ENST00000540503 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
PPFIBP1-212ENST00000540503 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
PPFIBP1-212ENST00000540503 LTN1O94822 1766 aa13.98□□□□□ -0.17
PPFIBP1-212ENST00000540503 AATKQ6ZMQ8 1374 aa13.97□□□□□ -0.17
PPFIBP1-212ENST00000540503 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
PPFIBP1-212ENST00000540503 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
PPFIBP1-212ENST00000540503 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
PPFIBP1-212ENST00000540503 ABCC6O95255 1503 aa13.96□□□□□ -0.17
PPFIBP1-212ENST00000540503 PRKRIP1Q9H875 184 aaPredicted RBP13.96□□□□□ -0.17
PPFIBP1-212ENST00000540503 MYBBP1AQ9BQG0 1328 aaKnown RBP13.95□□□□□ -0.18
PPFIBP1-212ENST00000540503 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
PPFIBP1-212ENST00000540503 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
PPFIBP1-212ENST00000540503 SMG6Q86US8 1419 aaKnown RBP13.94□□□□□ -0.18
PPFIBP1-212ENST00000540503 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
PPFIBP1-212ENST00000540503 SOX12O15370 315 aa13.93□□□□□ -0.18
PPFIBP1-212ENST00000540503 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
PPFIBP1-212ENST00000540503 GCP02774 474 aa13.93□□□□□ -0.18
PPFIBP1-212ENST00000540503 TNNT2P45379 298 aaPredicted RBP13.93□□□□□ -0.18
PPFIBP1-212ENST00000540503 CPDO75976 1380 aa13.93□□□□□ -0.18
PPFIBP1-212ENST00000540503 CDK12Q9NYV4 1490 aaPredicted RBP13.93□□□□□ -0.18
PPFIBP1-212ENST00000540503 COL14A1Q05707 1796 aaKnown RBP13.91□□□□□ -0.18
PPFIBP1-212ENST00000540503 CABLES1Q8TDN4 633 aa13.91□□□□□ -0.18
PPFIBP1-212ENST00000540503 FLT4P35916 1363 aa13.91□□□□□ -0.18
PPFIBP1-212ENST00000540503 PPP2R1AP30153 589 aa13.9□□□□□ -0.18
PPFIBP1-212ENST00000540503 CFAP53Q96M91 514 aa13.9□□□□□ -0.18
PPFIBP1-212ENST00000540503 PEAK1Q9H792 1746 aa13.9□□□□□ -0.18
PPFIBP1-212ENST00000540503 KIAA0232Q92628 1395 aa13.89□□□□□ -0.19
PPFIBP1-212ENST00000540503 ZBTB7CA1YPR0 619 aa13.89□□□□□ -0.19
PPFIBP1-212ENST00000540503 AMPHP49418 695 aa13.89□□□□□ -0.19
PPFIBP1-212ENST00000540503 PRDM11Q9NQV5 511 aa13.89□□□□□ -0.19
PPFIBP1-212ENST00000540503 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
PPFIBP1-212ENST00000540503 MAP3K19Q56UN5 1328 aa13.89□□□□□ -0.19
PPFIBP1-212ENST00000540503 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
PPFIBP1-212ENST00000540503 FAM208AQ9UK61 1670 aaKnown RBP13.88□□□□□ -0.19
PPFIBP1-212ENST00000540503 ZC3H6P61129 1189 aaKnown RBP13.88□□□□□ -0.19
PPFIBP1-212ENST00000540503 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
PPFIBP1-212ENST00000540503 ARHGEF25Q86VW2 580 aa13.88□□□□□ -0.19
PPFIBP1-212ENST00000540503 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
PPFIBP1-212ENST00000540503 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
PPFIBP1-212ENST00000540503 NWD2Q9ULI1 1742 aa13.87□□□□□ -0.19
PPFIBP1-212ENST00000540503 COL18A1P39060 1754 aa13.87□□□□□ -0.19
PPFIBP1-212ENST00000540503 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
PPFIBP1-212ENST00000540503 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
PPFIBP1-212ENST00000540503 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms