RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 SHPRHQ149N8 1683 aa20.71■□□□□ 0.91
MDM1-210ENST00000540418 SSH2Q76I76 1423 aa20.7■□□□□ 0.9
MDM1-210ENST00000540418 A0A1W2PP64 1363 aa20.69■□□□□ 0.9
MDM1-210ENST00000540418 KIF7Q2M1P5 1343 aa20.69■□□□□ 0.9
MDM1-210ENST00000540418 ANKRD36BQ8N2N9 1353 aa20.69■□□□□ 0.9
MDM1-210ENST00000540418 ABTB2Q8N961 1025 aa20.68■□□□□ 0.9
MDM1-210ENST00000540418 TTC21BQ7Z4L5 1316 aa20.68■□□□□ 0.9
MDM1-210ENST00000540418 AKAP12Q02952 1782 aa20.67■□□□□ 0.9
MDM1-210ENST00000540418 NUTM2BA6NNL0 878 aaPredicted RBP20.67■□□□□ 0.9
MDM1-210ENST00000540418 NUTM2EB1AL46 878 aaPredicted RBP20.67■□□□□ 0.9
MDM1-210ENST00000540418 NUTM2AQ8IVF1 878 aaPredicted RBP20.67■□□□□ 0.9
MDM1-210ENST00000540418 TTC21AQ8NDW8 1320 aa20.67■□□□□ 0.9
MDM1-210ENST00000540418 COL22A1Q8NFW1 1626 aaPredicted RBP20.66■□□□□ 0.9
MDM1-210ENST00000540418 ALS2Q96Q42 1657 aa20.65■□□□□ 0.9
MDM1-210ENST00000540418 EDC4Q6P2E9 1401 aaKnown RBP20.65■□□□□ 0.9
MDM1-210ENST00000540418 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.9
MDM1-210ENST00000540418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.64■□□□□ 0.9
MDM1-210ENST00000540418 CABLES1Q8TDN4 633 aa20.64■□□□□ 0.89
MDM1-210ENST00000540418 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
MDM1-210ENST00000540418 CCDC7Q96M83 1385 aa20.63■□□□□ 0.89
MDM1-210ENST00000540418 NLRP13Q86W25 1043 aa20.63■□□□□ 0.89
MDM1-210ENST00000540418 MON2Q7Z3U7 1717 aa20.63■□□□□ 0.89
MDM1-210ENST00000540418 PLEKHG5O94827 1062 aa20.63■□□□□ 0.89
MDM1-210ENST00000540418 MYOM1P52179 1685 aa20.63■□□□□ 0.89
MDM1-210ENST00000540418 NLRP6P59044 892 aa20.62■□□□□ 0.89
MDM1-210ENST00000540418 CARD14Q9BXL6 1004 aa20.62■□□□□ 0.89
MDM1-210ENST00000540418 HAP1P54257 671 aaPredicted RBP20.61■□□□□ 0.89
MDM1-210ENST00000540418 PANK3Q9H999 370 aa20.61■□□□□ 0.89
MDM1-210ENST00000540418 LRP6O75581 1613 aa20.61■□□□□ 0.89
MDM1-210ENST00000540418 NRKQ7Z2Y5 1582 aa20.6■□□□□ 0.89
MDM1-210ENST00000540418 MEX3CQ5U5Q3 659 aaKnown RBP20.6■□□□□ 0.89
MDM1-210ENST00000540418 ADAMTS2O95450 1211 aa20.59■□□□□ 0.89
MDM1-210ENST00000540418 NME9Q86XW9 330 aa20.59■□□□□ 0.89
MDM1-210ENST00000540418 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
MDM1-210ENST00000540418 USP19O94966 1318 aa20.58■□□□□ 0.88
MDM1-210ENST00000540418 USP31Q70CQ4 1352 aa20.56■□□□□ 0.88
MDM1-210ENST00000540418 ZRANB1Q9UGI0 708 aa20.56■□□□□ 0.88
MDM1-210ENST00000540418 PIK3C2AO00443 1686 aa20.56■□□□□ 0.88
MDM1-210ENST00000540418 NSD3Q9BZ95 1437 aa20.55■□□□□ 0.88
MDM1-210ENST00000540418 FYB1O15117 783 aa20.55■□□□□ 0.88
MDM1-210ENST00000540418 GCP02774 474 aa20.55■□□□□ 0.88
MDM1-210ENST00000540418 C8orf37Q96NL8 207 aa20.54■□□□□ 0.88
MDM1-210ENST00000540418 NGLY1Q96IV0 654 aa20.53■□□□□ 0.88
MDM1-210ENST00000540418 KCNH5Q8NCM2 988 aa20.52■□□□□ 0.88
MDM1-210ENST00000540418 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.88
MDM1-210ENST00000540418 COG3Q96JB2 828 aa20.52■□□□□ 0.87
MDM1-210ENST00000540418 CRYBG1Q9Y4K1 1723 aa20.51■□□□□ 0.87
MDM1-210ENST00000540418 ABCA3Q99758 1704 aa20.51■□□□□ 0.87
MDM1-210ENST00000540418 ZC3H6P61129 1189 aaKnown RBP20.51■□□□□ 0.87
MDM1-210ENST00000540418 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
MDM1-210ENST00000540418 GGNBP2Q9H3C7 697 aa20.51■□□□□ 0.87
MDM1-210ENST00000540418 FAM83GA6ND36 823 aa20.5■□□□□ 0.87
MDM1-210ENST00000540418 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
MDM1-210ENST00000540418 SLIT3O75094 1523 aa20.5■□□□□ 0.87
MDM1-210ENST00000540418 OVOS2A0A0J9YW53 1432 aa20.49■□□□□ 0.87
MDM1-210ENST00000540418 OVOS2Q6IE36 1432 aa20.49■□□□□ 0.87
MDM1-210ENST00000540418 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
MDM1-210ENST00000540418 FNBP4Q8N3X1 1017 aaPredicted RBP20.49■□□□□ 0.87
MDM1-210ENST00000540418 PER1O15534 1290 aaPredicted RBP20.48■□□□□ 0.87
MDM1-210ENST00000540418 PRDM11Q9NQV5 511 aa20.48■□□□□ 0.87
MDM1-210ENST00000540418 KIAA0232Q92628 1395 aa20.48■□□□□ 0.87
MDM1-210ENST00000540418 AFF2P51816 1311 aa20.48■□□□□ 0.87
MDM1-210ENST00000540418 CPDO75976 1380 aa20.48■□□□□ 0.87
MDM1-210ENST00000540418 SOX12O15370 315 aa20.47■□□□□ 0.87
MDM1-210ENST00000540418 USP54Q70EL1 1684 aa20.47■□□□□ 0.87
MDM1-210ENST00000540418 MARF1Q9Y4F3 1742 aaKnown RBP20.46■□□□□ 0.87
MDM1-210ENST00000540418 RGS17Q9UGC6 210 aaPredicted RBP20.46■□□□□ 0.87
MDM1-210ENST00000540418 ZNF772Q68DY9 489 aaPredicted RBP20.45■□□□□ 0.86
MDM1-210ENST00000540418 CHRNA2Q15822 529 aa20.45■□□□□ 0.86
MDM1-210ENST00000540418 ARHGEF25Q86VW2 580 aa20.45■□□□□ 0.86
MDM1-210ENST00000540418 USP21Q9UK80 565 aa20.44■□□□□ 0.86
MDM1-210ENST00000540418 ZNF316A6NFI3 1004 aaPredicted RBP20.43■□□□□ 0.86
MDM1-210ENST00000540418 AMER1Q5JTC6 1135 aaPredicted RBP20.43■□□□□ 0.86
MDM1-210ENST00000540418 NSD2O96028 1365 aa20.43■□□□□ 0.86
MDM1-210ENST00000540418 NFAT5O94916 1531 aa20.42■□□□□ 0.86
MDM1-210ENST00000540418 SLIT2O94813 1529 aa20.42■□□□□ 0.86
MDM1-210ENST00000540418 ZBTB7CA1YPR0 619 aa20.42■□□□□ 0.86
MDM1-210ENST00000540418 KIF20BQ96Q89 1820 aa20.42■□□□□ 0.86
MDM1-210ENST00000540418 BTG4Q9NY30 223 aa20.42■□□□□ 0.86
MDM1-210ENST00000540418 UNC5CLQ8IV45 518 aa20.41■□□□□ 0.86
MDM1-210ENST00000540418 BCL9LQ86UU0 1499 aa20.41■□□□□ 0.86
MDM1-210ENST00000540418 AATKQ6ZMQ8 1374 aa20.41■□□□□ 0.86
MDM1-210ENST00000540418 COL14A1Q05707 1796 aaKnown RBP20.4■□□□□ 0.86
MDM1-210ENST00000540418 FBLN1P23142 703 aa20.4■□□□□ 0.86
MDM1-210ENST00000540418 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.85
MDM1-210ENST00000540418 QTRT2Q9H974 415 aaKnown RBP20.38■□□□□ 0.85
MDM1-210ENST00000540418 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
MDM1-210ENST00000540418 POTEAQ6S8J7 498 aa20.37■□□□□ 0.85
MDM1-210ENST00000540418 TRPC5Q9UL62 973 aaPredicted RBP20.37■□□□□ 0.85
MDM1-210ENST00000540418 NPC1L1Q9UHC9 1359 aa20.37■□□□□ 0.85
MDM1-210ENST00000540418 AXIN2Q9Y2T1 843 aa20.36■□□□□ 0.85
MDM1-210ENST00000540418 MAP3K19Q56UN5 1328 aa20.36■□□□□ 0.85
MDM1-210ENST00000540418 EVA1CP58658 441 aa20.35■□□□□ 0.85
MDM1-210ENST00000540418 CC2D1BQ5T0F9 858 aaKnown RBP20.35■□□□□ 0.85
MDM1-210ENST00000540418 PLCH1Q4KWH8 1693 aa20.35■□□□□ 0.85
MDM1-210ENST00000540418 RRS1Q15050 365 aaKnown RBP20.35■□□□□ 0.85
MDM1-210ENST00000540418 CAMTA1Q9Y6Y1 1673 aa20.35■□□□□ 0.85
MDM1-210ENST00000540418 NWD2Q9ULI1 1742 aa20.35■□□□□ 0.85
MDM1-210ENST00000540418 TNNT2P45379 298 aaPredicted RBP20.34■□□□□ 0.85
MDM1-210ENST00000540418 VPS72Q15906 364 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms