RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 CFAP65Q6ZU64 1925 aaKnown RBP10.5□□□□□ -0.73
NECAP1-204ENST00000540083 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
NECAP1-204ENST00000540083 IDI1Q13907 227 aa10.5□□□□□ -0.73
NECAP1-204ENST00000540083 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.5□□□□□ -0.73
NECAP1-204ENST00000540083 UGGT1Q9NYU2 1555 aa10.49□□□□□ -0.73
NECAP1-204ENST00000540083 CEP170BQ9Y4F5 1589 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-204ENST00000540083 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
NECAP1-204ENST00000540083 ANKLE2Q86XL3 938 aa10.49□□□□□ -0.73
NECAP1-204ENST00000540083 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
NECAP1-204ENST00000540083 UBE2Q2Q8WVN8 375 aa10.49□□□□□ -0.73
NECAP1-204ENST00000540083 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
NECAP1-204ENST00000540083 KDM5AP29375 1690 aaKnown RBP10.49□□□□□ -0.73
NECAP1-204ENST00000540083 SPHKAPQ2M3C7 1700 aa10.49□□□□□ -0.73
NECAP1-204ENST00000540083 TRPM2O94759 1503 aa10.48□□□□□ -0.73
NECAP1-204ENST00000540083 MYO3AQ8NEV4 1616 aa10.48□□□□□ -0.73
NECAP1-204ENST00000540083 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
NECAP1-204ENST00000540083 ZNF142P52746 1687 aaPredicted RBP10.47□□□□□ -0.73
NECAP1-204ENST00000540083 RPGRIP1LQ68CZ1 1315 aa10.47□□□□□ -0.73
NECAP1-204ENST00000540083 PLA2R1Q13018 1463 aa10.47□□□□□ -0.73
NECAP1-204ENST00000540083 LMTK3Q96Q04 1460 aa10.47□□□□□ -0.73
NECAP1-204ENST00000540083 ZNF326Q5BKZ1 582 aaKnown RBP10.46□□□□□ -0.73
NECAP1-204ENST00000540083 UPF1Q92900 1129 aaKnown RBP eCLIP10.46□□□□□ -0.73
NECAP1-204ENST00000540083 SYNMO15061 1565 aa10.45□□□□□ -0.74
NECAP1-204ENST00000540083 ANKRD30BQ9BXX2 1392 aa10.45□□□□□ -0.74
NECAP1-204ENST00000540083 LHX6Q9UPM6 363 aa10.45□□□□□ -0.74
NECAP1-204ENST00000540083 PIK3C2BO00750 1634 aa10.44□□□□□ -0.74
NECAP1-204ENST00000540083 ADGRB3O60242 1522 aa10.44□□□□□ -0.74
NECAP1-204ENST00000540083 FANCIQ9NVI1 1328 aa10.44□□□□□ -0.74
NECAP1-204ENST00000540083 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-204ENST00000540083 TXNDC2Q86VQ3 553 aa10.44□□□□□ -0.74
NECAP1-204ENST00000540083 KIF1BO60333 1816 aa10.44□□□□□ -0.74
NECAP1-204ENST00000540083 TMEM2Q9UHN6 1383 aa10.43□□□□□ -0.74
NECAP1-204ENST00000540083 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
NECAP1-204ENST00000540083 DHX57Q6P158 1386 aaKnown RBP10.42□□□□□ -0.74
NECAP1-204ENST00000540083 UBR1Q8IWV7 1749 aa10.42□□□□□ -0.74
NECAP1-204ENST00000540083 HSPA2P54652 639 aa10.42□□□□□ -0.74
NECAP1-204ENST00000540083 CAMK2BQ13554 666 aa10.42□□□□□ -0.74
NECAP1-204ENST00000540083 EMILIN3Q9NT22 766 aa10.42□□□□□ -0.74
NECAP1-204ENST00000540083 DAXXQ9UER7 740 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-204ENST00000540083 SLIT1O75093 1534 aa10.42□□□□□ -0.74
NECAP1-204ENST00000540083 PLCB2Q00722 1185 aa10.41□□□□□ -0.74
NECAP1-204ENST00000540083 ZNF687Q8N1G0 1237 aa10.41□□□□□ -0.74
NECAP1-204ENST00000540083 BCANQ96GW7 911 aa10.41□□□□□ -0.74
NECAP1-204ENST00000540083 SCAF11Q99590 1463 aaKnown RBP10.41□□□□□ -0.74
NECAP1-204ENST00000540083 TMEM131LA2VDJ0 1609 aa10.4□□□□□ -0.74
NECAP1-204ENST00000540083 MAP3K9P80192 1104 aa10.4□□□□□ -0.74
NECAP1-204ENST00000540083 ARHGAP23Q9P227 1491 aa10.4□□□□□ -0.74
NECAP1-204ENST00000540083 RIMS2Q9UQ26 1411 aa10.4□□□□□ -0.75
NECAP1-204ENST00000540083 CLTCL1P53675 1640 aa10.4□□□□□ -0.75
NECAP1-204ENST00000540083 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-204ENST00000540083 RGL3Q3MIN7 710 aa10.39□□□□□ -0.75
NECAP1-204ENST00000540083 WDR70Q9NW82 654 aa10.39□□□□□ -0.75
NECAP1-204ENST00000540083 TIMELESSQ9UNS1 1208 aa10.39□□□□□ -0.75
NECAP1-204ENST00000540083 MED14O60244 1454 aa10.38□□□□□ -0.75
NECAP1-204ENST00000540083 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
NECAP1-204ENST00000540083 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
NECAP1-204ENST00000540083 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-204ENST00000540083 ZFYVE9O95405 1425 aa10.38□□□□□ -0.75
NECAP1-204ENST00000540083 NPHP4O75161 1426 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-204ENST00000540083 PLEKHG1Q9ULL1 1385 aa10.37□□□□□ -0.75
NECAP1-204ENST00000540083 SPATA31E1Q6ZUB1 1445 aa10.36□□□□□ -0.75
NECAP1-204ENST00000540083 EVI5O60447 810 aa10.36□□□□□ -0.75
NECAP1-204ENST00000540083 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-204ENST00000540083 LTKP29376 864 aa10.35□□□□□ -0.75
NECAP1-204ENST00000540083 E2F4Q16254 413 aa10.35□□□□□ -0.75
NECAP1-204ENST00000540083 TBX22Q9Y458 520 aa10.35□□□□□ -0.75
NECAP1-204ENST00000540083 TONSLQ96HA7 1378 aa10.35□□□□□ -0.75
NECAP1-204ENST00000540083 DCAF11Q8TEB1 546 aa10.34□□□□□ -0.75
NECAP1-204ENST00000540083 PIK3R4Q99570 1358 aa10.34□□□□□ -0.75
NECAP1-204ENST00000540083 IQGAP1P46940 1657 aa10.33□□□□□ -0.76
NECAP1-204ENST00000540083 MYO5BQ9ULV0 1848 aa10.33□□□□□ -0.76
NECAP1-204ENST00000540083 STRCQ7RTU9 1775 aa10.32□□□□□ -0.76
NECAP1-204ENST00000540083 DIP2AQ14689 1571 aa10.32□□□□□ -0.76
NECAP1-204ENST00000540083 MYOM2P54296 1465 aa10.32□□□□□ -0.76
NECAP1-204ENST00000540083 YTHDC1Q96MU7 727 aaKnown RBP10.32□□□□□ -0.76
NECAP1-204ENST00000540083 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
NECAP1-204ENST00000540083 NEXMIFQ5QGS0 1516 aa10.32□□□□□ -0.76
NECAP1-204ENST00000540083 DPYSL4O14531 572 aa10.31□□□□□ -0.76
NECAP1-204ENST00000540083 PPP4R3BQ5MIZ7 849 aa10.31□□□□□ -0.76
NECAP1-204ENST00000540083 SIN3AQ96ST3 1273 aa10.31□□□□□ -0.76
NECAP1-204ENST00000540083 KDM2AQ9Y2K7 1162 aa10.31□□□□□ -0.76
NECAP1-204ENST00000540083 RBM19Q9Y4C8 960 aaKnown RBP10.31□□□□□ -0.76
NECAP1-204ENST00000540083 PPLO60437 1756 aa10.3□□□□□ -0.76
NECAP1-204ENST00000540083 EIF5BO60841 1220 aaKnown RBP10.3□□□□□ -0.76
NECAP1-204ENST00000540083 PBX2P40425 430 aa10.3□□□□□ -0.76
NECAP1-204ENST00000540083 NUTM2DQ5VT03 806 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-204ENST00000540083 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
NECAP1-204ENST00000540083 KCNA6P17658 529 aa10.29□□□□□ -0.76
NECAP1-204ENST00000540083 L3MBTL2Q969R5 705 aa10.29□□□□□ -0.76
NECAP1-204ENST00000540083 SLC26A8Q96RN1 970 aa10.29□□□□□ -0.76
NECAP1-204ENST00000540083 C14orf93Q9H972 538 aaKnown RBP10.29□□□□□ -0.76
NECAP1-204ENST00000540083 FOSBP53539 338 aa10.28□□□□□ -0.76
NECAP1-204ENST00000540083 POTEEQ6S8J3 1075 aa10.28□□□□□ -0.76
NECAP1-204ENST00000540083 SPNS2Q8IVW8 549 aa10.28□□□□□ -0.76
NECAP1-204ENST00000540083 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
NECAP1-204ENST00000540083 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-204ENST00000540083 ADGRF5Q8IZF2 1346 aa10.28□□□□□ -0.76
NECAP1-204ENST00000540083 IFT172Q9UG01 1749 aa10.27□□□□□ -0.76
NECAP1-204ENST00000540083 PIK3C2GO75747 1445 aa10.27□□□□□ -0.77
NECAP1-204ENST00000540083 LAMC1P11047 1609 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms