RNA–Protein interactions for RNA: ENST00000539967.6

RFX4-206, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-206ENST00000539967 KRT28Q7Z3Y7 464 aa18.08■□□□□ 0.48
RFX4-206ENST00000539967 KIF1AQ12756 1690 aa18.08■□□□□ 0.48
RFX4-206ENST00000539967 NHSL1Q5SYE7 1610 aa18.08■□□□□ 0.48
RFX4-206ENST00000539967 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
RFX4-206ENST00000539967 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
RFX4-206ENST00000539967 PSME1Q06323 249 aa18.07■□□□□ 0.48
RFX4-206ENST00000539967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.07■□□□□ 0.48
RFX4-206ENST00000539967 TRPM3Q9HCF6 1732 aaPredicted RBP18.06■□□□□ 0.48
RFX4-206ENST00000539967 POLR3AO14802 1390 aaPredicted RBP18.06■□□□□ 0.48
RFX4-206ENST00000539967 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
RFX4-206ENST00000539967 KTN1Q86UP2 1357 aaKnown RBP18.05■□□□□ 0.48
RFX4-206ENST00000539967 PXDNQ92626 1479 aa18.05■□□□□ 0.48
RFX4-206ENST00000539967 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
RFX4-206ENST00000539967 USP6P35125 1406 aa18.04■□□□□ 0.48
RFX4-206ENST00000539967 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
RFX4-206ENST00000539967 ANKRD36BQ8N2N9 1353 aa18.04■□□□□ 0.48
RFX4-206ENST00000539967 HSPA1LP34931 641 aa18.03■□□□□ 0.48
RFX4-206ENST00000539967 NME9Q86XW9 330 aa18.03■□□□□ 0.48
RFX4-206ENST00000539967 NSD3Q9BZ95 1437 aa18.03■□□□□ 0.48
RFX4-206ENST00000539967 PER1O15534 1290 aaPredicted RBP18.02■□□□□ 0.48
RFX4-206ENST00000539967 LMOD2Q6P5Q4 547 aa18.02■□□□□ 0.48
RFX4-206ENST00000539967 SSH2Q76I76 1423 aa18.02■□□□□ 0.48
RFX4-206ENST00000539967 HDGFL2Q7Z4V5 671 aaPredicted RBP18.02■□□□□ 0.48
RFX4-206ENST00000539967 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
RFX4-206ENST00000539967 MARF1Q9Y4F3 1742 aaKnown RBP18.01■□□□□ 0.47
RFX4-206ENST00000539967 FBLN1P23142 703 aa18.01■□□□□ 0.47
RFX4-206ENST00000539967 TERF2IPQ9NYB0 399 aa18.01■□□□□ 0.47
RFX4-206ENST00000539967 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
RFX4-206ENST00000539967 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
RFX4-206ENST00000539967 SOS2Q07890 1332 aaPredicted RBP18■□□□□ 0.47
RFX4-206ENST00000539967 PIK3C2AO00443 1686 aa18■□□□□ 0.47
RFX4-206ENST00000539967 NPHP3Q7Z494 1330 aa17.99■□□□□ 0.47
RFX4-206ENST00000539967 CABLES1Q8TDN4 633 aa17.99■□□□□ 0.47
RFX4-206ENST00000539967 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
RFX4-206ENST00000539967 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
RFX4-206ENST00000539967 ALS2Q96Q42 1657 aa17.99■□□□□ 0.47
RFX4-206ENST00000539967 NINLQ9Y2I6 1382 aa17.98■□□□□ 0.47
RFX4-206ENST00000539967 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
RFX4-206ENST00000539967 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
RFX4-206ENST00000539967 FYB1O15117 783 aa17.96■□□□□ 0.47
RFX4-206ENST00000539967 EDC4Q6P2E9 1401 aaKnown RBP17.96■□□□□ 0.47
RFX4-206ENST00000539967 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.46
RFX4-206ENST00000539967 SOX12O15370 315 aa17.95■□□□□ 0.46
RFX4-206ENST00000539967 AMER1Q5JTC6 1135 aaPredicted RBP17.95■□□□□ 0.46
RFX4-206ENST00000539967 ABTB2Q8N961 1025 aa17.95■□□□□ 0.46
RFX4-206ENST00000539967 FBXO41Q8TF61 875 aa17.94■□□□□ 0.46
RFX4-206ENST00000539967 TNS3Q68CZ2 1445 aa17.93■□□□□ 0.46
RFX4-206ENST00000539967 TNNT2P45379 298 aaPredicted RBP17.93■□□□□ 0.46
RFX4-206ENST00000539967 SBNO1A3KN83 1393 aa17.92■□□□□ 0.46
RFX4-206ENST00000539967 MED1Q15648 1581 aaPredicted RBP17.92■□□□□ 0.46
RFX4-206ENST00000539967 NLRP6P59044 892 aa17.92■□□□□ 0.46
RFX4-206ENST00000539967 KNSTRNQ9Y448 316 aa17.92■□□□□ 0.46
RFX4-206ENST00000539967 CRYBG1Q9Y4K1 1723 aa17.91■□□□□ 0.46
RFX4-206ENST00000539967 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
RFX4-206ENST00000539967 ABCA3Q99758 1704 aa17.89■□□□□ 0.46
RFX4-206ENST00000539967 ANKRD26Q9UPS8 1709 aa17.89■□□□□ 0.46
RFX4-206ENST00000539967 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
RFX4-206ENST00000539967 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
RFX4-206ENST00000539967 NUTM2AQ8IVF1 878 aaPredicted RBP17.89■□□□□ 0.45
RFX4-206ENST00000539967 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
RFX4-206ENST00000539967 ILDR1Q86SU0 546 aaPredicted RBP17.88■□□□□ 0.45
RFX4-206ENST00000539967 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
RFX4-206ENST00000539967 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
RFX4-206ENST00000539967 PHRF1Q9P1Y6 1649 aaKnown RBP17.87■□□□□ 0.45
RFX4-206ENST00000539967 CGNL1Q0VF96 1302 aa17.87■□□□□ 0.45
RFX4-206ENST00000539967 OVOS2A0A0J9YW53 1432 aa17.87■□□□□ 0.45
RFX4-206ENST00000539967 OVOS2Q6IE36 1432 aa17.87■□□□□ 0.45
RFX4-206ENST00000539967 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
RFX4-206ENST00000539967 RGPD5Q99666 1765 aa17.86■□□□□ 0.45
RFX4-206ENST00000539967 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
RFX4-206ENST00000539967 SHPRHQ149N8 1683 aa17.85■□□□□ 0.45
RFX4-206ENST00000539967 USP31Q70CQ4 1352 aa17.85■□□□□ 0.45
RFX4-206ENST00000539967 USP54Q70EL1 1684 aa17.84■□□□□ 0.45
RFX4-206ENST00000539967 COL22A1Q8NFW1 1626 aaPredicted RBP17.84■□□□□ 0.45
RFX4-206ENST00000539967 RRS1Q15050 365 aaKnown RBP17.84■□□□□ 0.45
RFX4-206ENST00000539967 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
RFX4-206ENST00000539967 COG3Q96JB2 828 aa17.84■□□□□ 0.45
RFX4-206ENST00000539967 USP19O94966 1318 aa17.83■□□□□ 0.44
RFX4-206ENST00000539967 ADAMTS2O95450 1211 aa17.83■□□□□ 0.44
RFX4-206ENST00000539967 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.44
RFX4-206ENST00000539967 NLRP13Q86W25 1043 aa17.83■□□□□ 0.44
RFX4-206ENST00000539967 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
RFX4-206ENST00000539967 LTN1O94822 1766 aa17.83■□□□□ 0.44
RFX4-206ENST00000539967 GCP02774 474 aa17.82■□□□□ 0.44
RFX4-206ENST00000539967 CHRNA2Q15822 529 aa17.82■□□□□ 0.44
RFX4-206ENST00000539967 LRP6O75581 1613 aa17.82■□□□□ 0.44
RFX4-206ENST00000539967 SLIT3O75094 1523 aa17.82■□□□□ 0.44
RFX4-206ENST00000539967 PEAK1Q9H792 1746 aa17.81■□□□□ 0.44
RFX4-206ENST00000539967 ARHGEF10O15013 1369 aa17.81■□□□□ 0.44
RFX4-206ENST00000539967 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
RFX4-206ENST00000539967 NFAT5O94916 1531 aa17.81■□□□□ 0.44
RFX4-206ENST00000539967 JCADQ9P266 1359 aa17.8■□□□□ 0.44
RFX4-206ENST00000539967 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
RFX4-206ENST00000539967 EMILIN1Q9Y6C2 1016 aa17.8■□□□□ 0.44
RFX4-206ENST00000539967 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
RFX4-206ENST00000539967 KIAA0232Q92628 1395 aa17.78■□□□□ 0.44
RFX4-206ENST00000539967 COL18A1P39060 1754 aa17.77■□□□□ 0.44
RFX4-206ENST00000539967 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
RFX4-206ENST00000539967 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.44
RFX4-206ENST00000539967 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms