RNA–Protein interactions for RNA: ENST00000539953.1

SCNN1A-214, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 401 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-214ENST00000539953 GPRASP1Q5JY77 1395 aa18.18■□□□□ 0.5
SCNN1A-214ENST00000539953 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
SCNN1A-214ENST00000539953 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
SCNN1A-214ENST00000539953 BTG4Q9NY30 223 aa18.15■□□□□ 0.5
SCNN1A-214ENST00000539953 CCDC9Q9Y3X0 531 aaKnown RBP18.15■□□□□ 0.5
SCNN1A-214ENST00000539953 KRT27Q7Z3Y8 459 aa18.14■□□□□ 0.49
SCNN1A-214ENST00000539953 DEFB132Q7Z7B7 95 aa18.14■□□□□ 0.49
SCNN1A-214ENST00000539953 NGDNQ8NEJ9 315 aaKnown RBP18.14■□□□□ 0.49
SCNN1A-214ENST00000539953 NUDT16Q96DE0 195 aaKnown RBP18.14■□□□□ 0.49
SCNN1A-214ENST00000539953 THSD7AQ9UPZ6 1657 aa18.14■□□□□ 0.49
SCNN1A-214ENST00000539953 FAM98CQ17RN3 349 aaKnown RBP18.12■□□□□ 0.49
SCNN1A-214ENST00000539953 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
SCNN1A-214ENST00000539953 CDK19Q9BWU1 502 aa18.11■□□□□ 0.49
SCNN1A-214ENST00000539953 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
SCNN1A-214ENST00000539953 SPATA31A5Q5VU36 1347 aa18.1■□□□□ 0.49
SCNN1A-214ENST00000539953 SPATA31A7Q8IWB4 1347 aa18.1■□□□□ 0.49
SCNN1A-214ENST00000539953 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
SCNN1A-214ENST00000539953 NBPF1Q3BBV0 1214 aa18.09■□□□□ 0.49
SCNN1A-214ENST00000539953 TNS1Q9HBL0 1735 aaKnown RBP18.08■□□□□ 0.48
SCNN1A-214ENST00000539953 KIAA0232Q92628 1395 aa18.07■□□□□ 0.48
SCNN1A-214ENST00000539953 ACEP12821 1306 aa18.07■□□□□ 0.48
SCNN1A-214ENST00000539953 PRDM11Q9NQV5 511 aa18.07■□□□□ 0.48
SCNN1A-214ENST00000539953 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
SCNN1A-214ENST00000539953 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
SCNN1A-214ENST00000539953 SF3B2Q13435 895 aaKnown RBP18.06■□□□□ 0.48
SCNN1A-214ENST00000539953 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
SCNN1A-214ENST00000539953 A0A0G2JS52 829 aa18.05■□□□□ 0.48
SCNN1A-214ENST00000539953 MYT1Q01538 1121 aa18.05■□□□□ 0.48
SCNN1A-214ENST00000539953 NBPF8Q3BBV2 869 aa18.05■□□□□ 0.48
SCNN1A-214ENST00000539953 NUTM2GQ5VZR2 741 aa18.05■□□□□ 0.48
SCNN1A-214ENST00000539953 CCDC61Q9Y6R9 512 aa18.05■□□□□ 0.48
SCNN1A-214ENST00000539953 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
SCNN1A-214ENST00000539953 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
SCNN1A-214ENST00000539953 FAM182BQ5T319 152 aa18.04■□□□□ 0.48
SCNN1A-214ENST00000539953 LRP5O75197 1615 aa18.04■□□□□ 0.48
SCNN1A-214ENST00000539953 SPATA31A1Q5TZJ5 1347 aa18.03■□□□□ 0.48
SCNN1A-214ENST00000539953 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
SCNN1A-214ENST00000539953 CAMTA1Q9Y6Y1 1673 aa18.02■□□□□ 0.47
SCNN1A-214ENST00000539953 USP19O94966 1318 aa18■□□□□ 0.47
SCNN1A-214ENST00000539953 PPIP5K1Q6PFW1 1433 aa18■□□□□ 0.47
SCNN1A-214ENST00000539953 BAG6P46379 1132 aa18■□□□□ 0.47
SCNN1A-214ENST00000539953 CENPJQ9HC77 1338 aaPredicted RBP17.99■□□□□ 0.47
SCNN1A-214ENST00000539953 DISP2A7MBM2 1401 aa17.99■□□□□ 0.47
SCNN1A-214ENST00000539953 SSH2Q76I76 1423 aa17.99■□□□□ 0.47
SCNN1A-214ENST00000539953 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
SCNN1A-214ENST00000539953 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
SCNN1A-214ENST00000539953 CPDO75976 1380 aa17.99■□□□□ 0.47
SCNN1A-214ENST00000539953 ABTB2Q8N961 1025 aa17.98■□□□□ 0.47
SCNN1A-214ENST00000539953 EN1Q05925 392 aaPredicted RBP17.97■□□□□ 0.47
SCNN1A-214ENST00000539953 CABP2Q9NPB3 220 aa17.97■□□□□ 0.47
SCNN1A-214ENST00000539953 PSDA5PKW4 1024 aaPredicted RBP17.96■□□□□ 0.47
SCNN1A-214ENST00000539953 SRPK2P78362 688 aaKnown RBP17.96■□□□□ 0.47
SCNN1A-214ENST00000539953 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
SCNN1A-214ENST00000539953 PIK3C2AO00443 1686 aa17.95■□□□□ 0.46
SCNN1A-214ENST00000539953 PARP4Q9UKK3 1724 aaKnown RBP17.95■□□□□ 0.46
SCNN1A-214ENST00000539953 COL18A1P39060 1754 aa17.94■□□□□ 0.46
SCNN1A-214ENST00000539953 LARP1Q6PKG0 1096 aaKnown RBP17.94■□□□□ 0.46
SCNN1A-214ENST00000539953 BARGINQ6ZT62 677 aa17.94■□□□□ 0.46
SCNN1A-214ENST00000539953 AKAP12Q02952 1782 aa17.94■□□□□ 0.46
SCNN1A-214ENST00000539953 RREB1Q92766 1687 aa17.93■□□□□ 0.46
SCNN1A-214ENST00000539953 SLIT3O75094 1523 aa17.93■□□□□ 0.46
SCNN1A-214ENST00000539953 USP6P35125 1406 aa17.93■□□□□ 0.46
SCNN1A-214ENST00000539953 GCP02774 474 aa17.93■□□□□ 0.46
SCNN1A-214ENST00000539953 USP35Q9P2H5 1018 aa17.93■□□□□ 0.46
SCNN1A-214ENST00000539953 COL5A2P05997 1499 aaPredicted RBP17.93■□□□□ 0.46
SCNN1A-214ENST00000539953 BRD4O60885 1362 aaPredicted RBP17.92■□□□□ 0.46
SCNN1A-214ENST00000539953 EVA1CP58658 441 aa17.92■□□□□ 0.46
SCNN1A-214ENST00000539953 FAM196AQ6ZSG2 479 aa17.92■□□□□ 0.46
SCNN1A-214ENST00000539953 NLRP13Q86W25 1043 aa17.92■□□□□ 0.46
SCNN1A-214ENST00000539953 CABP1Q9NZU7 370 aa17.92■□□□□ 0.46
SCNN1A-214ENST00000539953 TRIM37O94972 964 aa17.91■□□□□ 0.46
SCNN1A-214ENST00000539953 EZH2Q15910 746 aaKnown RBP17.91■□□□□ 0.46
SCNN1A-214ENST00000539953 CAMKK2Q96RR4 588 aa17.91■□□□□ 0.46
SCNN1A-214ENST00000539953 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
SCNN1A-214ENST00000539953 WNK3Q9BYP7 1800 aa17.91■□□□□ 0.46
SCNN1A-214ENST00000539953 NUP188Q5SRE5 1749 aa17.9■□□□□ 0.46
SCNN1A-214ENST00000539953 RGPD5Q99666 1765 aa17.9■□□□□ 0.46
SCNN1A-214ENST00000539953 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
SCNN1A-214ENST00000539953 PEAK1Q9H792 1746 aa17.89■□□□□ 0.46
SCNN1A-214ENST00000539953 TCP11L2Q8N4U5 519 aa17.89■□□□□ 0.45
SCNN1A-214ENST00000539953 R3HDM1Q15032 1099 aaKnown RBP17.87■□□□□ 0.45
SCNN1A-214ENST00000539953 THRAP3Q9Y2W1 955 aaKnown RBP17.87■□□□□ 0.45
SCNN1A-214ENST00000539953 LRRC37A3O60309 1634 aa17.87■□□□□ 0.45
SCNN1A-214ENST00000539953 NLRP6P59044 892 aa17.86■□□□□ 0.45
SCNN1A-214ENST00000539953 PDE3BQ13370 1112 aa17.86■□□□□ 0.45
SCNN1A-214ENST00000539953 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
SCNN1A-214ENST00000539953 AATKQ6ZMQ8 1374 aa17.86■□□□□ 0.45
SCNN1A-214ENST00000539953 CRB1P82279 1406 aa17.86■□□□□ 0.45
SCNN1A-214ENST00000539953 APBA3O96018 575 aa17.85■□□□□ 0.45
SCNN1A-214ENST00000539953 PARD3Q8TEW0 1356 aa17.85■□□□□ 0.45
SCNN1A-214ENST00000539953 MON2Q7Z3U7 1717 aa17.84■□□□□ 0.45
SCNN1A-214ENST00000539953 ROCK2O75116 1388 aaKnown RBP17.83■□□□□ 0.45
SCNN1A-214ENST00000539953 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
SCNN1A-214ENST00000539953 RGPD3A6NKT7 1758 aaPredicted RBP17.82■□□□□ 0.44
SCNN1A-214ENST00000539953 RGPD4Q7Z3J3 1758 aa17.82■□□□□ 0.44
SCNN1A-214ENST00000539953 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
SCNN1A-214ENST00000539953 AXIN2Q9Y2T1 843 aa17.82■□□□□ 0.44
SCNN1A-214ENST00000539953 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
SCNN1A-214ENST00000539953 ZBTB7CA1YPR0 619 aa17.81■□□□□ 0.44
SCNN1A-214ENST00000539953 NFAT5O94916 1531 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms