RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 EDC4Q6P2E9 1401 aaKnown RBP23.72■■□□□ 1.39
SLC38A10-203ENST00000539643 XRN1Q8IZH2 1706 aaKnown RBP23.71■■□□□ 1.39
SLC38A10-203ENST00000539643 CRBNQ96SW2 442 aa23.69■■□□□ 1.38
SLC38A10-203ENST00000539643 PRR36Q9H6K5 1346 aa23.69■■□□□ 1.38
SLC38A10-203ENST00000539643 MON2Q7Z3U7 1717 aa23.69■■□□□ 1.38
SLC38A10-203ENST00000539643 TRMT2AQ8IZ69 625 aaKnown RBP23.69■■□□□ 1.38
SLC38A10-203ENST00000539643 COL3A1P02461 1466 aaPredicted RBP23.68■■□□□ 1.38
SLC38A10-203ENST00000539643 MSH5O43196 834 aa23.68■■□□□ 1.38
SLC38A10-203ENST00000539643 KCNA6P17658 529 aa23.68■■□□□ 1.38
SLC38A10-203ENST00000539643 AKAP12Q02952 1782 aa23.67■■□□□ 1.38
SLC38A10-203ENST00000539643 NCKAP5LQ9HCH0 1330 aa23.67■■□□□ 1.38
SLC38A10-203ENST00000539643 TOPAZ1Q8N9V7 1692 aa23.67■■□□□ 1.38
SLC38A10-203ENST00000539643 NKTRP30414 1462 aaKnown RBP23.66■■□□□ 1.38
SLC38A10-203ENST00000539643 PNPLA6Q8IY17 1366 aa23.65■■□□□ 1.38
SLC38A10-203ENST00000539643 IQSEC2Q5JU85 1478 aa23.65■■□□□ 1.38
SLC38A10-203ENST00000539643 NPHP4O75161 1426 aaPredicted RBP23.65■■□□□ 1.38
SLC38A10-203ENST00000539643 E9PSI1 815 aa23.65■■□□□ 1.38
SLC38A10-203ENST00000539643 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
SLC38A10-203ENST00000539643 CHD2O14647 1828 aaKnown RBP23.64■■□□□ 1.38
SLC38A10-203ENST00000539643 RUNDC1Q96C34 613 aa23.64■■□□□ 1.38
SLC38A10-203ENST00000539643 ITSN1Q15811 1721 aa23.64■■□□□ 1.37
SLC38A10-203ENST00000539643 C20orf194Q5TEA3 1177 aa23.63■■□□□ 1.37
SLC38A10-203ENST00000539643 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.63■■□□□ 1.37
SLC38A10-203ENST00000539643 SPINK5Q9NQ38 1064 aaPredicted RBP23.63■■□□□ 1.37
SLC38A10-203ENST00000539643 NCBP3Q53F19 620 aaKnown RBP23.62■■□□□ 1.37
SLC38A10-203ENST00000539643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.62■■□□□ 1.37
SLC38A10-203ENST00000539643 PLEKHG3A1L390 1219 aa23.61■■□□□ 1.37
SLC38A10-203ENST00000539643 NUTM2FA1L443 756 aa23.6■■□□□ 1.37
SLC38A10-203ENST00000539643 PHF23Q9BUL5 403 aaPredicted RBP23.59■■□□□ 1.37
SLC38A10-203ENST00000539643 WWC1Q8IX03 1113 aa23.58■■□□□ 1.37
SLC38A10-203ENST00000539643 DMRT2Q9Y5R5 561 aa23.58■■□□□ 1.37
SLC38A10-203ENST00000539643 NRKQ7Z2Y5 1582 aa23.58■■□□□ 1.37
SLC38A10-203ENST00000539643 TCERG1O14776 1098 aaKnown RBP23.58■■□□□ 1.36
SLC38A10-203ENST00000539643 AATKQ6ZMQ8 1374 aa23.57■■□□□ 1.36
SLC38A10-203ENST00000539643 U2AF1L5P0DN76 240 aaPredicted RBP23.56■■□□□ 1.36
SLC38A10-203ENST00000539643 U2AF1Q01081 240 aaKnown RBP eCLIP23.56■■□□□ 1.36
SLC38A10-203ENST00000539643 NME9Q86XW9 330 aa23.56■■□□□ 1.36
SLC38A10-203ENST00000539643 TCP11L2Q8N4U5 519 aa23.56■■□□□ 1.36
SLC38A10-203ENST00000539643 POLKQ9UBT6 870 aa23.56■■□□□ 1.36
SLC38A10-203ENST00000539643 CCDC27Q2M243 656 aa23.55■■□□□ 1.36
SLC38A10-203ENST00000539643 ACEP12821 1306 aa23.55■■□□□ 1.36
SLC38A10-203ENST00000539643 KDM4FA0A1W2PPD8 638 aa23.53■■□□□ 1.36
SLC38A10-203ENST00000539643 USP6P35125 1406 aa23.53■■□□□ 1.36
SLC38A10-203ENST00000539643 DIAPH1O60610 1272 aaKnown RBP23.52■■□□□ 1.36
SLC38A10-203ENST00000539643 NEUROD2Q15784 382 aa23.52■■□□□ 1.36
SLC38A10-203ENST00000539643 PLEKHF1Q96S99 279 aa23.52■■□□□ 1.36
SLC38A10-203ENST00000539643 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
SLC38A10-203ENST00000539643 SSH2Q76I76 1423 aa23.51■■□□□ 1.35
SLC38A10-203ENST00000539643 ERICH6Q7L0X2 663 aa23.51■■□□□ 1.35
SLC38A10-203ENST00000539643 COG3Q96JB2 828 aa23.51■■□□□ 1.35
SLC38A10-203ENST00000539643 MAP2P11137 1827 aaKnown RBP23.51■■□□□ 1.35
SLC38A10-203ENST00000539643 ANKARQ7Z5J8 1434 aa23.51■■□□□ 1.35
SLC38A10-203ENST00000539643 TTC21BQ7Z4L5 1316 aa23.51■■□□□ 1.35
SLC38A10-203ENST00000539643 CDK12Q9NYV4 1490 aaPredicted RBP23.5■■□□□ 1.35
SLC38A10-203ENST00000539643 BCAR3O75815 825 aa23.49■■□□□ 1.35
SLC38A10-203ENST00000539643 MS4A1P11836 297 aa23.49■■□□□ 1.35
SLC38A10-203ENST00000539643 WDR63Q8IWG1 891 aa23.49■■□□□ 1.35
SLC38A10-203ENST00000539643 ZRANB1Q9UGI0 708 aa23.49■■□□□ 1.35
SLC38A10-203ENST00000539643 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
SLC38A10-203ENST00000539643 U2SURPO15042 1029 aaKnown RBP23.48■■□□□ 1.35
SLC38A10-203ENST00000539643 PMFBP1Q8TBY8 1022 aa23.48■■□□□ 1.35
SLC38A10-203ENST00000539643 FMN2Q9NZ56 1722 aa23.48■■□□□ 1.35
SLC38A10-203ENST00000539643 KDM2BQ8NHM5 1336 aa23.48■■□□□ 1.35
SLC38A10-203ENST00000539643 OVOS2A0A0J9YW53 1432 aa23.47■■□□□ 1.35
SLC38A10-203ENST00000539643 OVOS2Q6IE36 1432 aa23.47■■□□□ 1.35
SLC38A10-203ENST00000539643 NALCNQ8IZF0 1738 aa23.47■■□□□ 1.35
SLC38A10-203ENST00000539643 FBLN1P23142 703 aa23.47■■□□□ 1.35
SLC38A10-203ENST00000539643 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
SLC38A10-203ENST00000539643 ANP32AP39687 249 aaKnown RBP23.45■■□□□ 1.35
SLC38A10-203ENST00000539643 PNNQ9H307 717 aaKnown RBP23.45■■□□□ 1.35
SLC38A10-203ENST00000539643 NWD1Q149M9 1564 aa23.45■■□□□ 1.34
SLC38A10-203ENST00000539643 CENPQQ7L2Z9 268 aaPredicted RBP23.45■■□□□ 1.34
SLC38A10-203ENST00000539643 NGDNQ8NEJ9 315 aaKnown RBP23.45■■□□□ 1.34
SLC38A10-203ENST00000539643 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
SLC38A10-203ENST00000539643 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
SLC38A10-203ENST00000539643 FCHSD2O94868 740 aa23.43■■□□□ 1.34
SLC38A10-203ENST00000539643 TTC21AQ8NDW8 1320 aa23.43■■□□□ 1.34
SLC38A10-203ENST00000539643 PDE4AP27815 886 aa23.43■■□□□ 1.34
SLC38A10-203ENST00000539643 HSPA2P54652 639 aa23.43■■□□□ 1.34
SLC38A10-203ENST00000539643 USP31Q70CQ4 1352 aa23.42■■□□□ 1.34
SLC38A10-203ENST00000539643 LRRC7Q96NW7 1537 aa23.41■■□□□ 1.34
SLC38A10-203ENST00000539643 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
SLC38A10-203ENST00000539643 IL13P35225 146 aa23.41■■□□□ 1.34
SLC38A10-203ENST00000539643 TMPOP42166 694 aaKnown RBP23.41■■□□□ 1.34
SLC38A10-203ENST00000539643 MAPK8IP3Q9UPT6 1336 aa23.4■■□□□ 1.34
SLC38A10-203ENST00000539643 PDE3AQ14432 1141 aa23.4■■□□□ 1.34
SLC38A10-203ENST00000539643 PROSER2Q86WR7 435 aaPredicted RBP23.4■■□□□ 1.34
SLC38A10-203ENST00000539643 BACH2Q9BYV9 841 aa23.4■■□□□ 1.34
SLC38A10-203ENST00000539643 RSPH6AQ9H0K4 717 aa23.4■■□□□ 1.34
SLC38A10-203ENST00000539643 C14orf37Q86TY3 774 aa23.39■■□□□ 1.33
SLC38A10-203ENST00000539643 CANXP27824 592 aaKnown RBP23.38■■□□□ 1.33
SLC38A10-203ENST00000539643 RRS1Q15050 365 aaKnown RBP23.38■■□□□ 1.33
SLC38A10-203ENST00000539643 SKAP1Q86WV1 359 aa23.38■■□□□ 1.33
SLC38A10-203ENST00000539643 MYH16Q9H6N6 1097 aa23.37■■□□□ 1.33
SLC38A10-203ENST00000539643 NOP58Q9Y2X3 529 aaKnown RBP23.37■■□□□ 1.33
SLC38A10-203ENST00000539643 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
SLC38A10-203ENST00000539643 RARSP54136 660 aaKnown RBP23.36■■□□□ 1.33
SLC38A10-203ENST00000539643 IPO9Q96P70 1041 aaKnown RBP23.36■■□□□ 1.33
SLC38A10-203ENST00000539643 PHF8Q9UPP1 1060 aa23.36■■□□□ 1.33
SLC38A10-203ENST00000539643 LMTK3Q96Q04 1460 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms