RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 POLR3GLQ9BT43 218 aa17.72■□□□□ 0.43
TSPAN9-207ENST00000539631 USP6P35125 1406 aa17.72■□□□□ 0.43
TSPAN9-207ENST00000539631 NINLQ9Y2I6 1382 aa17.7■□□□□ 0.42
TSPAN9-207ENST00000539631 LMOD2Q6P5Q4 547 aa17.7■□□□□ 0.42
TSPAN9-207ENST00000539631 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
TSPAN9-207ENST00000539631 KTN1Q86UP2 1357 aaKnown RBP17.69■□□□□ 0.42
TSPAN9-207ENST00000539631 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
TSPAN9-207ENST00000539631 SPATA31A6Q5VVP1 1343 aa17.69■□□□□ 0.42
TSPAN9-207ENST00000539631 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
TSPAN9-207ENST00000539631 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
TSPAN9-207ENST00000539631 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
TSPAN9-207ENST00000539631 SSH2Q76I76 1423 aa17.68■□□□□ 0.42
TSPAN9-207ENST00000539631 HDGFL2Q7Z4V5 671 aaPredicted RBP17.68■□□□□ 0.42
TSPAN9-207ENST00000539631 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
TSPAN9-207ENST00000539631 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
TSPAN9-207ENST00000539631 LRP6O75581 1613 aa17.68■□□□□ 0.42
TSPAN9-207ENST00000539631 ARHGEF10O15013 1369 aa17.67■□□□□ 0.42
TSPAN9-207ENST00000539631 BRD4O60885 1362 aaPredicted RBP17.67■□□□□ 0.42
TSPAN9-207ENST00000539631 TERF2IPQ9NYB0 399 aa17.67■□□□□ 0.42
TSPAN9-207ENST00000539631 PIK3C2AO00443 1686 aa17.67■□□□□ 0.42
TSPAN9-207ENST00000539631 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
TSPAN9-207ENST00000539631 MARF1Q9Y4F3 1742 aaKnown RBP17.66■□□□□ 0.42
TSPAN9-207ENST00000539631 KIF7Q2M1P5 1343 aa17.66■□□□□ 0.42
TSPAN9-207ENST00000539631 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
TSPAN9-207ENST00000539631 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
TSPAN9-207ENST00000539631 NUTM2GQ5VZR2 741 aa17.65■□□□□ 0.42
TSPAN9-207ENST00000539631 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
TSPAN9-207ENST00000539631 ABTB2Q8N961 1025 aa17.64■□□□□ 0.41
TSPAN9-207ENST00000539631 CABLES1Q8TDN4 633 aa17.64■□□□□ 0.41
TSPAN9-207ENST00000539631 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.41
TSPAN9-207ENST00000539631 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.62■□□□□ 0.41
TSPAN9-207ENST00000539631 TTC21AQ8NDW8 1320 aa17.62■□□□□ 0.41
TSPAN9-207ENST00000539631 WASHC2AQ641Q2 1341 aa17.61■□□□□ 0.41
TSPAN9-207ENST00000539631 CCDC7Q96M83 1385 aa17.61■□□□□ 0.41
TSPAN9-207ENST00000539631 ADAMTS2O95450 1211 aa17.6■□□□□ 0.41
TSPAN9-207ENST00000539631 USP54Q70EL1 1684 aa17.6■□□□□ 0.41
TSPAN9-207ENST00000539631 KIF20BQ96Q89 1820 aa17.6■□□□□ 0.41
TSPAN9-207ENST00000539631 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
TSPAN9-207ENST00000539631 NLRP6P59044 892 aa17.59■□□□□ 0.41
TSPAN9-207ENST00000539631 MEX3CQ5U5Q3 659 aaKnown RBP17.59■□□□□ 0.41
TSPAN9-207ENST00000539631 NLRP13Q86W25 1043 aa17.59■□□□□ 0.41
TSPAN9-207ENST00000539631 NME9Q86XW9 330 aa17.59■□□□□ 0.41
TSPAN9-207ENST00000539631 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
TSPAN9-207ENST00000539631 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
TSPAN9-207ENST00000539631 NSD3Q9BZ95 1437 aa17.57■□□□□ 0.4
TSPAN9-207ENST00000539631 USP19O94966 1318 aa17.57■□□□□ 0.4
TSPAN9-207ENST00000539631 PANK3Q9H999 370 aa17.57■□□□□ 0.4
TSPAN9-207ENST00000539631 SLIT3O75094 1523 aa17.57■□□□□ 0.4
TSPAN9-207ENST00000539631 USP31Q70CQ4 1352 aa17.55■□□□□ 0.4
TSPAN9-207ENST00000539631 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
TSPAN9-207ENST00000539631 PLCH1Q4KWH8 1693 aa17.54■□□□□ 0.4
TSPAN9-207ENST00000539631 GCP02774 474 aa17.53■□□□□ 0.4
TSPAN9-207ENST00000539631 OVOS2A0A0J9YW53 1432 aa17.53■□□□□ 0.4
TSPAN9-207ENST00000539631 OVOS2Q6IE36 1432 aa17.53■□□□□ 0.4
TSPAN9-207ENST00000539631 FYB1O15117 783 aa17.52■□□□□ 0.4
TSPAN9-207ENST00000539631 COL14A1Q05707 1796 aaKnown RBP17.52■□□□□ 0.4
TSPAN9-207ENST00000539631 AFF2P51816 1311 aa17.51■□□□□ 0.39
TSPAN9-207ENST00000539631 SOX12O15370 315 aa17.51■□□□□ 0.39
TSPAN9-207ENST00000539631 ZC3H6P61129 1189 aaKnown RBP17.51■□□□□ 0.39
TSPAN9-207ENST00000539631 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
TSPAN9-207ENST00000539631 GGNBP2Q9H3C7 697 aa17.51■□□□□ 0.39
TSPAN9-207ENST00000539631 ANKRD26Q9UPS8 1709 aa17.51■□□□□ 0.39
TSPAN9-207ENST00000539631 FAM83GA6ND36 823 aa17.5■□□□□ 0.39
TSPAN9-207ENST00000539631 RGS17Q9UGC6 210 aaPredicted RBP17.5■□□□□ 0.39
TSPAN9-207ENST00000539631 NFAT5O94916 1531 aa17.5■□□□□ 0.39
TSPAN9-207ENST00000539631 KIAA0232Q92628 1395 aa17.5■□□□□ 0.39
TSPAN9-207ENST00000539631 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
TSPAN9-207ENST00000539631 LTN1O94822 1766 aa17.49■□□□□ 0.39
TSPAN9-207ENST00000539631 COG3Q96JB2 828 aa17.49■□□□□ 0.39
TSPAN9-207ENST00000539631 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
TSPAN9-207ENST00000539631 NRAPQ86VF7 1730 aa17.48■□□□□ 0.39
TSPAN9-207ENST00000539631 CHRNA2Q15822 529 aa17.48■□□□□ 0.39
TSPAN9-207ENST00000539631 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
TSPAN9-207ENST00000539631 SLIT2O94813 1529 aa17.47■□□□□ 0.39
TSPAN9-207ENST00000539631 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
TSPAN9-207ENST00000539631 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
TSPAN9-207ENST00000539631 FNBP4Q8N3X1 1017 aaPredicted RBP17.47■□□□□ 0.39
TSPAN9-207ENST00000539631 PRDM11Q9NQV5 511 aa17.47■□□□□ 0.39
TSPAN9-207ENST00000539631 CPDO75976 1380 aa17.47■□□□□ 0.39
TSPAN9-207ENST00000539631 COL18A1P39060 1754 aa17.47■□□□□ 0.39
TSPAN9-207ENST00000539631 RGPD5Q99666 1765 aa17.47■□□□□ 0.39
TSPAN9-207ENST00000539631 LMO7Q8WWI1 1683 aa17.46■□□□□ 0.39
TSPAN9-207ENST00000539631 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
TSPAN9-207ENST00000539631 PER1O15534 1290 aaPredicted RBP17.45■□□□□ 0.38
TSPAN9-207ENST00000539631 USP21Q9UK80 565 aa17.45■□□□□ 0.38
TSPAN9-207ENST00000539631 KNSTRNQ9Y448 316 aa17.45■□□□□ 0.38
TSPAN9-207ENST00000539631 FBLN1P23142 703 aa17.44■□□□□ 0.38
TSPAN9-207ENST00000539631 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
TSPAN9-207ENST00000539631 ARHGEF25Q86VW2 580 aa17.44■□□□□ 0.38
TSPAN9-207ENST00000539631 CAMTA1Q9Y6Y1 1673 aa17.43■□□□□ 0.38
TSPAN9-207ENST00000539631 POTEAQ6S8J7 498 aa17.43■□□□□ 0.38
TSPAN9-207ENST00000539631 BTG4Q9NY30 223 aa17.43■□□□□ 0.38
TSPAN9-207ENST00000539631 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
TSPAN9-207ENST00000539631 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
TSPAN9-207ENST00000539631 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
TSPAN9-207ENST00000539631 NSD2O96028 1365 aa17.41■□□□□ 0.38
TSPAN9-207ENST00000539631 AATKQ6ZMQ8 1374 aa17.41■□□□□ 0.38
TSPAN9-207ENST00000539631 ATRNO75882 1429 aa17.4■□□□□ 0.38
TSPAN9-207ENST00000539631 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
TSPAN9-207ENST00000539631 QTRT2Q9H974 415 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms