RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.87■■□□□ 1.89
PACSIN3-211ENST00000539589 STRCP1A6NGW2 1772 aa26.84■■□□□ 1.89
PACSIN3-211ENST00000539589 STRCQ7RTU9 1775 aa26.84■■□□□ 1.89
PACSIN3-211ENST00000539589 ACEP12821 1306 aa26.84■■□□□ 1.89
PACSIN3-211ENST00000539589 NRKQ7Z2Y5 1582 aa26.84■■□□□ 1.89
PACSIN3-211ENST00000539589 POLR3AO14802 1390 aaPredicted RBP26.83■■□□□ 1.89
PACSIN3-211ENST00000539589 ZNF692Q9BU19 519 aaPredicted RBP26.82■■□□□ 1.88
PACSIN3-211ENST00000539589 ADGRL3Q9HAR2 1447 aa26.81■■□□□ 1.88
PACSIN3-211ENST00000539589 SHPRHQ149N8 1683 aa26.81■■□□□ 1.88
PACSIN3-211ENST00000539589 ANKARQ7Z5J8 1434 aa26.8■■□□□ 1.88
PACSIN3-211ENST00000539589 MTHFSP49914 203 aa26.8■■□□□ 1.88
PACSIN3-211ENST00000539589 NME9Q86XW9 330 aa26.8■■□□□ 1.88
PACSIN3-211ENST00000539589 PMFBP1Q8TBY8 1022 aa26.79■■□□□ 1.88
PACSIN3-211ENST00000539589 ZRANB1Q9UGI0 708 aa26.78■■□□□ 1.88
PACSIN3-211ENST00000539589 RCAN3Q9UKA8 241 aa26.78■■□□□ 1.88
PACSIN3-211ENST00000539589 USP6P35125 1406 aa26.77■■□□□ 1.88
PACSIN3-211ENST00000539589 CDCA7LQ96GN5 454 aa26.77■■□□□ 1.88
PACSIN3-211ENST00000539589 SSH2Q76I76 1423 aa26.75■■□□□ 1.87
PACSIN3-211ENST00000539589 MAP2P11137 1827 aaKnown RBP26.75■■□□□ 1.87
PACSIN3-211ENST00000539589 TTC21BQ7Z4L5 1316 aa26.74■■□□□ 1.87
PACSIN3-211ENST00000539589 PROSER2Q86WR7 435 aaPredicted RBP26.73■■□□□ 1.87
PACSIN3-211ENST00000539589 FBLN1P23142 703 aa26.73■■□□□ 1.87
PACSIN3-211ENST00000539589 B4GALNT3Q6L9W6 998 aa26.72■■□□□ 1.87
PACSIN3-211ENST00000539589 RRP1P56182 461 aaKnown RBP26.72■■□□□ 1.87
PACSIN3-211ENST00000539589 NGDNQ8NEJ9 315 aaKnown RBP26.7■■□□□ 1.86
PACSIN3-211ENST00000539589 COL3A1P02461 1466 aaPredicted RBP26.69■■□□□ 1.86
PACSIN3-211ENST00000539589 C14orf37Q86TY3 774 aa26.68■■□□□ 1.86
PACSIN3-211ENST00000539589 ZNF521Q96K83 1311 aa26.66■■□□□ 1.86
PACSIN3-211ENST00000539589 COG3Q96JB2 828 aa26.66■■□□□ 1.86
PACSIN3-211ENST00000539589 CFAP53Q96M91 514 aa26.66■■□□□ 1.86
PACSIN3-211ENST00000539589 OVOS2A0A0J9YW53 1432 aa26.65■■□□□ 1.86
PACSIN3-211ENST00000539589 OVOS2Q6IE36 1432 aa26.65■■□□□ 1.86
PACSIN3-211ENST00000539589 CCDC146Q8IYE0 955 aa26.65■■□□□ 1.86
PACSIN3-211ENST00000539589 NGEFQ8N5V2 710 aa26.65■■□□□ 1.86
PACSIN3-211ENST00000539589 POLKQ9UBT6 870 aa26.65■■□□□ 1.86
PACSIN3-211ENST00000539589 TMEM94Q12767 1356 aa26.64■■□□□ 1.86
PACSIN3-211ENST00000539589 GOLGA2Q08379 1002 aa26.64■■□□□ 1.86
PACSIN3-211ENST00000539589 PHF8Q9UPP1 1060 aa26.64■■□□□ 1.86
PACSIN3-211ENST00000539589 PNPLA6Q8IY17 1366 aa26.63■■□□□ 1.85
PACSIN3-211ENST00000539589 PIK3C2AO00443 1686 aa26.63■■□□□ 1.85
PACSIN3-211ENST00000539589 XIRP1Q702N8 1843 aaKnown RBP26.63■■□□□ 1.85
PACSIN3-211ENST00000539589 AATKQ6ZMQ8 1374 aa26.62■■□□□ 1.85
PACSIN3-211ENST00000539589 TTC21AQ8NDW8 1320 aa26.62■■□□□ 1.85
PACSIN3-211ENST00000539589 APAF1O14727 1248 aa26.61■■□□□ 1.85
PACSIN3-211ENST00000539589 C19orf44Q9H6X5 657 aa26.61■■□□□ 1.85
PACSIN3-211ENST00000539589 CCDC136Q96JN2 1154 aa26.6■■□□□ 1.85
PACSIN3-211ENST00000539589 EMILIN1Q9Y6C2 1016 aa26.6■■□□□ 1.85
PACSIN3-211ENST00000539589 MARF1Q9Y4F3 1742 aaKnown RBP26.6■■□□□ 1.85
PACSIN3-211ENST00000539589 ESCO1Q5FWF5 840 aa26.6■■□□□ 1.85
PACSIN3-211ENST00000539589 DUSP27Q5VZP5 1158 aa26.58■■□□□ 1.85
PACSIN3-211ENST00000539589 ORAI2Q96SN7 254 aa26.58■■□□□ 1.85
PACSIN3-211ENST00000539589 NCOA3Q9Y6Q9 1424 aa26.57■■□□□ 1.84
PACSIN3-211ENST00000539589 USP31Q70CQ4 1352 aa26.56■■□□□ 1.84
PACSIN3-211ENST00000539589 RRS1Q15050 365 aaKnown RBP26.56■■□□□ 1.84
PACSIN3-211ENST00000539589 PPM1GO15355 546 aaPredicted RBP26.55■■□□□ 1.84
PACSIN3-211ENST00000539589 SLFN5Q08AF3 891 aa26.55■■□□□ 1.84
PACSIN3-211ENST00000539589 C1orf167Q5SNV9 1468 aa26.55■■□□□ 1.84
PACSIN3-211ENST00000539589 USP54Q70EL1 1684 aa26.54■■□□□ 1.84
PACSIN3-211ENST00000539589 ZNF335Q9H4Z2 1342 aaPredicted RBP26.53■■□□□ 1.84
PACSIN3-211ENST00000539589 CDK12Q9NYV4 1490 aaPredicted RBP26.53■■□□□ 1.84
PACSIN3-211ENST00000539589 DIAPH1O60610 1272 aaKnown RBP26.52■■□□□ 1.84
PACSIN3-211ENST00000539589 U2AF1L5P0DN76 240 aaPredicted RBP26.52■■□□□ 1.84
PACSIN3-211ENST00000539589 U2AF1Q01081 240 aaKnown RBP eCLIP26.52■■□□□ 1.84
PACSIN3-211ENST00000539589 RBM19Q9Y4C8 960 aaKnown RBP26.52■■□□□ 1.84
PACSIN3-211ENST00000539589 MST1RQ04912 1400 aa26.52■■□□□ 1.84
PACSIN3-211ENST00000539589 TRMT2AQ8IZ69 625 aaKnown RBP26.51■■□□□ 1.83
PACSIN3-211ENST00000539589 RUNDC1Q96C34 613 aa26.51■■□□□ 1.83
PACSIN3-211ENST00000539589 PEAK1Q9H792 1746 aa26.51■■□□□ 1.83
PACSIN3-211ENST00000539589 DCCP43146 1447 aa26.51■■□□□ 1.83
PACSIN3-211ENST00000539589 LRRC7Q96NW7 1537 aa26.5■■□□□ 1.83
PACSIN3-211ENST00000539589 EXOC6Q8TAG9 804 aa26.5■■□□□ 1.83
PACSIN3-211ENST00000539589 E9PSI1 815 aa26.49■■□□□ 1.83
PACSIN3-211ENST00000539589 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
PACSIN3-211ENST00000539589 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
PACSIN3-211ENST00000539589 PAK3O75914 559 aaPredicted RBP26.48■■□□□ 1.83
PACSIN3-211ENST00000539589 ATF3P18847 181 aa26.48■■□□□ 1.83
PACSIN3-211ENST00000539589 NUTM2GQ5VZR2 741 aa26.48■■□□□ 1.83
PACSIN3-211ENST00000539589 KIF1AQ12756 1690 aa26.48■■□□□ 1.83
PACSIN3-211ENST00000539589 FOXO3O43524 673 aa26.48■■□□□ 1.83
PACSIN3-211ENST00000539589 NLRP6P59044 892 aa26.48■■□□□ 1.83
PACSIN3-211ENST00000539589 PSME1Q06323 249 aa26.47■■□□□ 1.83
PACSIN3-211ENST00000539589 SOX12O15370 315 aa26.46■■□□□ 1.83
PACSIN3-211ENST00000539589 ABTB2Q8N961 1025 aa26.46■■□□□ 1.83
PACSIN3-211ENST00000539589 TRPM3Q9HCF6 1732 aaPredicted RBP26.45■■□□□ 1.83
PACSIN3-211ENST00000539589 PLIN1O60240 522 aa26.45■■□□□ 1.82
PACSIN3-211ENST00000539589 IL13P35225 146 aa26.45■■□□□ 1.82
PACSIN3-211ENST00000539589 PLEKHF1Q96S99 279 aa26.44■■□□□ 1.82
PACSIN3-211ENST00000539589 XPCQ01831 940 aaPredicted RBP26.44■■□□□ 1.82
PACSIN3-211ENST00000539589 WWC1Q8IX03 1113 aa26.44■■□□□ 1.82
PACSIN3-211ENST00000539589 TCP11L2Q8N4U5 519 aa26.44■■□□□ 1.82
PACSIN3-211ENST00000539589 MSH6P52701 1360 aa26.44■■□□□ 1.82
PACSIN3-211ENST00000539589 SPINK5Q9NQ38 1064 aaPredicted RBP26.43■■□□□ 1.82
PACSIN3-211ENST00000539589 CADPS2Q86UW7 1296 aa26.42■■□□□ 1.82
PACSIN3-211ENST00000539589 MAP3K19Q56UN5 1328 aa26.42■■□□□ 1.82
PACSIN3-211ENST00000539589 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.41■■□□□ 1.82
PACSIN3-211ENST00000539589 RRP7AQ9Y3A4 280 aaKnown RBP26.41■■□□□ 1.82
PACSIN3-211ENST00000539589 NCBP3Q53F19 620 aaKnown RBP26.39■■□□□ 1.82
PACSIN3-211ENST00000539589 HSP90AB2PQ58FF8 381 aa26.38■■□□□ 1.81
PACSIN3-211ENST00000539589 KRT28Q7Z3Y7 464 aa26.38■■□□□ 1.81
PACSIN3-211ENST00000539589 DMRT2Q9Y5R5 561 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms