RNA–Protein interactions for RNA: ENST00000539254.1

CELF1-219, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-219ENST00000539254 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
CELF1-219ENST00000539254 TOPAZ1Q8N9V7 1692 aa13.61□□□□□ -0.23
CELF1-219ENST00000539254 ZBTB7CA1YPR0 619 aa13.61□□□□□ -0.23
CELF1-219ENST00000539254 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
CELF1-219ENST00000539254 ZC3H6P61129 1189 aaKnown RBP13.61□□□□□ -0.23
CELF1-219ENST00000539254 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
CELF1-219ENST00000539254 TRPC5Q9UL62 973 aaPredicted RBP13.61□□□□□ -0.23
CELF1-219ENST00000539254 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
CELF1-219ENST00000539254 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
CELF1-219ENST00000539254 ATAD2Q6PL18 1390 aa13.59□□□□□ -0.23
CELF1-219ENST00000539254 USP47Q96K76 1375 aa13.59□□□□□ -0.23
CELF1-219ENST00000539254 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
CELF1-219ENST00000539254 CHRNA2Q15822 529 aa13.59□□□□□ -0.23
CELF1-219ENST00000539254 SLC12A5Q9H2X9 1139 aa13.59□□□□□ -0.23
CELF1-219ENST00000539254 SOX12O15370 315 aa13.58□□□□□ -0.24
CELF1-219ENST00000539254 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
CELF1-219ENST00000539254 TESK2Q96S53 571 aa13.58□□□□□ -0.24
CELF1-219ENST00000539254 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
CELF1-219ENST00000539254 MARF1Q9Y4F3 1742 aaKnown RBP13.57□□□□□ -0.24
CELF1-219ENST00000539254 NLRP6P59044 892 aa13.57□□□□□ -0.24
CELF1-219ENST00000539254 NLRP13Q86W25 1043 aa13.57□□□□□ -0.24
CELF1-219ENST00000539254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
CELF1-219ENST00000539254 POLR3GLQ9BT43 218 aa13.57□□□□□ -0.24
CELF1-219ENST00000539254 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
CELF1-219ENST00000539254 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
CELF1-219ENST00000539254 USP6P35125 1406 aa13.56□□□□□ -0.24
CELF1-219ENST00000539254 BCL9LQ86UU0 1499 aa13.56□□□□□ -0.24
CELF1-219ENST00000539254 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
CELF1-219ENST00000539254 KTN1Q86UP2 1357 aaKnown RBP13.56□□□□□ -0.24
CELF1-219ENST00000539254 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
CELF1-219ENST00000539254 TMF1P82094 1093 aa13.55□□□□□ -0.24
CELF1-219ENST00000539254 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
CELF1-219ENST00000539254 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
CELF1-219ENST00000539254 STRN4Q9NRL3 753 aa13.55□□□□□ -0.24
CELF1-219ENST00000539254 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
CELF1-219ENST00000539254 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
CELF1-219ENST00000539254 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
CELF1-219ENST00000539254 KIAA0232Q92628 1395 aa13.55□□□□□ -0.24
CELF1-219ENST00000539254 ATRNO75882 1429 aa13.55□□□□□ -0.24
CELF1-219ENST00000539254 A0A0G2JS52 829 aa13.54□□□□□ -0.24
CELF1-219ENST00000539254 MYT1Q01538 1121 aa13.54□□□□□ -0.24
CELF1-219ENST00000539254 SLIT2O94813 1529 aa13.54□□□□□ -0.24
CELF1-219ENST00000539254 GCP02774 474 aa13.53□□□□□ -0.24
CELF1-219ENST00000539254 RGS12O14924 1447 aa13.53□□□□□ -0.24
CELF1-219ENST00000539254 EVA1CP58658 441 aa13.52□□□□□ -0.25
CELF1-219ENST00000539254 NME9Q86XW9 330 aa13.52□□□□□ -0.25
CELF1-219ENST00000539254 HSPA5P11021 654 aaKnown RBP13.51□□□□□ -0.25
CELF1-219ENST00000539254 TERF2IPQ9NYB0 399 aa13.51□□□□□ -0.25
CELF1-219ENST00000539254 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
CELF1-219ENST00000539254 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
CELF1-219ENST00000539254 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
CELF1-219ENST00000539254 SSH2Q76I76 1423 aa13.5□□□□□ -0.25
CELF1-219ENST00000539254 USP19O94966 1318 aa13.5□□□□□ -0.25
CELF1-219ENST00000539254 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
CELF1-219ENST00000539254 VPS72Q15906 364 aa13.5□□□□□ -0.25
CELF1-219ENST00000539254 USP35Q9P2H5 1018 aa13.5□□□□□ -0.25
CELF1-219ENST00000539254 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
CELF1-219ENST00000539254 BRD4O60885 1362 aaPredicted RBP13.49□□□□□ -0.25
CELF1-219ENST00000539254 TTC21AQ8NDW8 1320 aa13.49□□□□□ -0.25
CELF1-219ENST00000539254 EIF4G2P78344 907 aaKnown RBP eCLIP13.49□□□□□ -0.25
CELF1-219ENST00000539254 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
CELF1-219ENST00000539254 PUS7Q96PZ0 661 aaKnown RBP13.49□□□□□ -0.25
CELF1-219ENST00000539254 AKAP12Q02952 1782 aa13.49□□□□□ -0.25
CELF1-219ENST00000539254 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
CELF1-219ENST00000539254 CD163L1Q9NR16 1453 aa13.48□□□□□ -0.25
CELF1-219ENST00000539254 COL14A1Q05707 1796 aaKnown RBP13.48□□□□□ -0.25
CELF1-219ENST00000539254 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
CELF1-219ENST00000539254 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
CELF1-219ENST00000539254 CDCA8Q53HL2 280 aa13.47□□□□□ -0.25
CELF1-219ENST00000539254 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
CELF1-219ENST00000539254 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
CELF1-219ENST00000539254 GLI3P10071 1580 aa13.46□□□□□ -0.25
CELF1-219ENST00000539254 LARP1Q6PKG0 1096 aaKnown RBP13.46□□□□□ -0.25
CELF1-219ENST00000539254 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
CELF1-219ENST00000539254 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.45□□□□□ -0.26
CELF1-219ENST00000539254 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
CELF1-219ENST00000539254 KCNH5Q8NCM2 988 aa13.45□□□□□ -0.26
CELF1-219ENST00000539254 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
CELF1-219ENST00000539254 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
CELF1-219ENST00000539254 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
CELF1-219ENST00000539254 CPDO75976 1380 aa13.44□□□□□ -0.26
CELF1-219ENST00000539254 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 CSB-PGBD3P0DP91 1061 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 FBLN1P23142 703 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 GGNBP2Q9H3C7 697 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 AXIN2Q9Y2T1 843 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 CAMTA1Q9Y6Y1 1673 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 SLIT3O75094 1523 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 ANKRD36BQ8N2N9 1353 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 NINLQ9Y2I6 1382 aa13.43□□□□□ -0.26
CELF1-219ENST00000539254 FAM182BQ5T319 152 aa13.42□□□□□ -0.26
CELF1-219ENST00000539254 ARHGEF25Q86VW2 580 aa13.42□□□□□ -0.26
CELF1-219ENST00000539254 COG3Q96JB2 828 aa13.42□□□□□ -0.26
CELF1-219ENST00000539254 SPATA31A1Q5TZJ5 1347 aa13.41□□□□□ -0.26
CELF1-219ENST00000539254 TOM1L2Q6ZVM7 507 aa13.41□□□□□ -0.26
CELF1-219ENST00000539254 KRT27Q7Z3Y8 459 aa13.41□□□□□ -0.26
CELF1-219ENST00000539254 C11orf95C9JLR9 678 aaPredicted RBP13.4□□□□□ -0.26
CELF1-219ENST00000539254 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.26
CELF1-219ENST00000539254 USP31Q70CQ4 1352 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms