RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 NASPP49321 788 aaPredicted RBP21.49■■□□□ 1.03
C2CD3-213ENST00000539061 KIAA1211Q6ZU35 1233 aa21.49■■□□□ 1.03
C2CD3-213ENST00000539061 ZSCAN30Q86W11 494 aa21.49■■□□□ 1.03
C2CD3-213ENST00000539061 CHD1LQ86WJ1 897 aa21.49■■□□□ 1.03
C2CD3-213ENST00000539061 KIF2CQ99661 725 aa21.49■■□□□ 1.03
C2CD3-213ENST00000539061 ASXL2Q76L83 1435 aa21.48■■□□□ 1.03
C2CD3-213ENST00000539061 K7ELQ4 463 aaPredicted RBP21.48■■□□□ 1.03
C2CD3-213ENST00000539061 IPO8O15397 1037 aaKnown RBP21.48■■□□□ 1.03
C2CD3-213ENST00000539061 ADGRB2O60241 1585 aa21.48■■□□□ 1.03
C2CD3-213ENST00000539061 AFAP1Q8N556 730 aa21.48■■□□□ 1.03
C2CD3-213ENST00000539061 USP32Q8NFA0 1604 aa21.47■■□□□ 1.03
C2CD3-213ENST00000539061 IBTKQ9P2D0 1353 aaPredicted RBP21.46■■□□□ 1.03
C2CD3-213ENST00000539061 KIF16BQ96L93 1317 aa21.46■■□□□ 1.03
C2CD3-213ENST00000539061 CLEC17AQ6ZS10 378 aa21.46■■□□□ 1.03
C2CD3-213ENST00000539061 TRAK1Q9UPV9 953 aa21.46■■□□□ 1.03
C2CD3-213ENST00000539061 NRXN1Q9ULB1 1477 aa21.46■■□□□ 1.03
C2CD3-213ENST00000539061 FOXD4L1Q9NU39 408 aa21.46■■□□□ 1.03
C2CD3-213ENST00000539061 ABCC11Q96J66 1382 aa21.45■■□□□ 1.02
C2CD3-213ENST00000539061 VWDEQ8N2E2 1590 aa21.45■■□□□ 1.02
C2CD3-213ENST00000539061 ZFYVE16Q7Z3T8 1539 aa21.45■■□□□ 1.02
C2CD3-213ENST00000539061 OFD1O75665 1012 aa21.45■■□□□ 1.02
C2CD3-213ENST00000539061 TMPOP42166 694 aaKnown RBP21.45■■□□□ 1.02
C2CD3-213ENST00000539061 KLHL40Q2TBA0 621 aa21.45■■□□□ 1.02
C2CD3-213ENST00000539061 NSD2O96028 1365 aa21.45■■□□□ 1.02
C2CD3-213ENST00000539061 IL16Q14005 1332 aa21.44■■□□□ 1.02
C2CD3-213ENST00000539061 NOS1P29475 1434 aa21.44■■□□□ 1.02
C2CD3-213ENST00000539061 CD2BP2O95400 341 aaKnown RBP21.44■■□□□ 1.02
C2CD3-213ENST00000539061 MSNP26038 577 aaKnown RBP21.44■■□□□ 1.02
C2CD3-213ENST00000539061 UGGT1Q9NYU2 1555 aa21.43■■□□□ 1.02
C2CD3-213ENST00000539061 SSFA2P28290 1259 aa21.43■■□□□ 1.02
C2CD3-213ENST00000539061 TRIM35Q9UPQ4 493 aa21.43■■□□□ 1.02
C2CD3-213ENST00000539061 DDX49Q9Y6V7 483 aaKnown RBP21.43■■□□□ 1.02
C2CD3-213ENST00000539061 KIF3BO15066 747 aa21.43■■□□□ 1.02
C2CD3-213ENST00000539061 SETBP1Q9Y6X0 1596 aa21.43■■□□□ 1.02
C2CD3-213ENST00000539061 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.42■■□□□ 1.02
C2CD3-213ENST00000539061 TERF1P54274 439 aa21.42■■□□□ 1.02
C2CD3-213ENST00000539061 PLEKHF1Q96S99 279 aa21.42■■□□□ 1.02
C2CD3-213ENST00000539061 KIF1BO60333 1816 aa21.41■■□□□ 1.02
C2CD3-213ENST00000539061 CD109Q6YHK3 1445 aa21.41■■□□□ 1.02
C2CD3-213ENST00000539061 BAG4O95429 457 aaKnown RBP21.4■■□□□ 1.02
C2CD3-213ENST00000539061 GAS2L2Q8NHY3 880 aa21.4■■□□□ 1.02
C2CD3-213ENST00000539061 IFT172Q9UG01 1749 aa21.4■■□□□ 1.02
C2CD3-213ENST00000539061 U2SURPO15042 1029 aaKnown RBP21.4■■□□□ 1.02
C2CD3-213ENST00000539061 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
C2CD3-213ENST00000539061 GCC1Q96CN9 775 aa21.4■■□□□ 1.02
C2CD3-213ENST00000539061 ALDH1L2Q3SY69 923 aa21.39■■□□□ 1.02
C2CD3-213ENST00000539061 TBC1D9Q6ZT07 1266 aa21.39■■□□□ 1.02
C2CD3-213ENST00000539061 HS1BP3Q53T59 392 aa21.38■■□□□ 1.01
C2CD3-213ENST00000539061 PUS7Q96PZ0 661 aaKnown RBP21.38■■□□□ 1.01
C2CD3-213ENST00000539061 C14orf93Q9H972 538 aaKnown RBP21.38■■□□□ 1.01
C2CD3-213ENST00000539061 ZNF445P59923 1031 aa21.38■■□□□ 1.01
C2CD3-213ENST00000539061 RBM42Q9BTD8 480 aaKnown RBP21.38■■□□□ 1.01
C2CD3-213ENST00000539061 CFAP74Q9C0B2 1584 aa21.38■■□□□ 1.01
C2CD3-213ENST00000539061 ANKRD36BQ8N2N9 1353 aa21.38■■□□□ 1.01
C2CD3-213ENST00000539061 CHMP4BQ9H444 224 aaKnown RBP21.37■■□□□ 1.01
C2CD3-213ENST00000539061 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
C2CD3-213ENST00000539061 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
C2CD3-213ENST00000539061 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
C2CD3-213ENST00000539061 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
C2CD3-213ENST00000539061 ZC3H13Q5T200 1668 aaKnown RBP21.36■■□□□ 1.01
C2CD3-213ENST00000539061 ARHGAP31Q2M1Z3 1444 aa21.35■■□□□ 1.01
C2CD3-213ENST00000539061 RIPK4P57078 832 aa21.35■■□□□ 1.01
C2CD3-213ENST00000539061 INO80Q9ULG1 1556 aaPredicted RBP21.34■■□□□ 1.01
C2CD3-213ENST00000539061 EVC2Q86UK5 1308 aa21.34■■□□□ 1.01
C2CD3-213ENST00000539061 CALD1Q05682 793 aaKnown RBP21.34■■□□□ 1.01
C2CD3-213ENST00000539061 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
C2CD3-213ENST00000539061 NUCB2P80303 420 aa21.34■■□□□ 1.01
C2CD3-213ENST00000539061 MROH2AA6NES4 1674 aa21.33■■□□□ 1
C2CD3-213ENST00000539061 TMEM132EQ6IEE7 984 aa21.33■■□□□ 1
C2CD3-213ENST00000539061 MAP7D2Q96T17 732 aa21.33■■□□□ 1
C2CD3-213ENST00000539061 ATP7AQ04656 1500 aa21.32■■□□□ 1
C2CD3-213ENST00000539061 ZBTB7BO15156 539 aaPredicted RBP21.32■■□□□ 1
C2CD3-213ENST00000539061 CDC45O75419 566 aa21.32■■□□□ 1
C2CD3-213ENST00000539061 BRPF1P55201 1214 aaPredicted RBP21.32■■□□□ 1
C2CD3-213ENST00000539061 PPIP5K1Q6PFW1 1433 aa21.32■■□□□ 1
C2CD3-213ENST00000539061 MCTP1Q6DN14 999 aa21.32■■□□□ 1
C2CD3-213ENST00000539061 ZNF428Q96B54 188 aa21.32■■□□□ 1
C2CD3-213ENST00000539061 NOL7Q9UMY1 257 aaKnown RBP21.31■■□□□ 1
C2CD3-213ENST00000539061 RABEP1Q15276 862 aa21.31■■□□□ 1
C2CD3-213ENST00000539061 MED14O60244 1454 aa21.31■■□□□ 1
C2CD3-213ENST00000539061 ARAP3Q8WWN8 1544 aa21.3■■□□□ 1
C2CD3-213ENST00000539061 ABCA9Q8IUA7 1624 aa21.3■■□□□ 1
C2CD3-213ENST00000539061 NCLP19338 710 aaKnown RBP21.3■■□□□ 1
C2CD3-213ENST00000539061 ZSCAN23Q3MJ62 389 aa21.3■■□□□ 1
C2CD3-213ENST00000539061 CAVIN1Q6NZI2 390 aaKnown RBP21.3■■□□□ 1
C2CD3-213ENST00000539061 FANCAO15360 1455 aa21.3■■□□□ 1
C2CD3-213ENST00000539061 ADGRB1O14514 1584 aa21.3■■□□□ 1
C2CD3-213ENST00000539061 EFCAB6Q5THR3 1501 aa21.3■■□□□ 1
C2CD3-213ENST00000539061 ZNF500O60304 480 aaPredicted RBP21.3■■□□□ 1
C2CD3-213ENST00000539061 CFAP44Q96MT7 982 aa21.29■■□□□ 1
C2CD3-213ENST00000539061 R3HCC1Q9Y3T6 440 aaKnown RBP21.29■■□□□ 1
C2CD3-213ENST00000539061 ADGRB3O60242 1522 aa21.29■■□□□ 1
C2CD3-213ENST00000539061 PDLIM2Q96JY6 352 aa21.29■■□□□ 1
C2CD3-213ENST00000539061 RBM10P98175 930 aaKnown RBP21.28■■□□□ 1
C2CD3-213ENST00000539061 LMBRD1Q9NUN5 540 aa21.28■■□□□ 1
C2CD3-213ENST00000539061 MROH1Q8NDA8 1641 aa21.28■■□□□ 1
C2CD3-213ENST00000539061 RBSNQ9H1K0 784 aa21.27■■□□□ 1
C2CD3-213ENST00000539061 COL3A1P02461 1466 aaPredicted RBP21.27■■□□□ 1
C2CD3-213ENST00000539061 CYP2E1P05181 493 aaPredicted RBP21.27■□□□□ 0.99
C2CD3-213ENST00000539061 ARHGAP45Q92619 1136 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms