RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
GGA3-202ENST00000538886 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
GGA3-202ENST00000538886 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
GGA3-202ENST00000538886 CCDC146Q8IYE0 955 aa11.62□□□□□ -0.55
GGA3-202ENST00000538886 RAPGEF4Q8WZA2 1011 aa11.62□□□□□ -0.55
GGA3-202ENST00000538886 PIK3R4Q99570 1358 aa11.62□□□□□ -0.55
GGA3-202ENST00000538886 DEKP35659 375 aaKnown RBP11.62□□□□□ -0.55
GGA3-202ENST00000538886 NPM2Q86SE8 214 aaKnown RBP11.62□□□□□ -0.55
GGA3-202ENST00000538886 MYO3AQ8NEV4 1616 aa11.62□□□□□ -0.55
GGA3-202ENST00000538886 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
GGA3-202ENST00000538886 VWDEQ8N2E2 1590 aa11.61□□□□□ -0.55
GGA3-202ENST00000538886 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
GGA3-202ENST00000538886 USP21Q9UK80 565 aa11.61□□□□□ -0.55
GGA3-202ENST00000538886 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
GGA3-202ENST00000538886 KCNH5Q8NCM2 988 aa11.6□□□□□ -0.55
GGA3-202ENST00000538886 RRP7AQ9Y3A4 280 aaKnown RBP11.6□□□□□ -0.55
GGA3-202ENST00000538886 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
GGA3-202ENST00000538886 FYB1O15117 783 aa11.59□□□□□ -0.55
GGA3-202ENST00000538886 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
GGA3-202ENST00000538886 FAM182BQ5T319 152 aa11.59□□□□□ -0.55
GGA3-202ENST00000538886 RBM19Q9Y4C8 960 aaKnown RBP11.59□□□□□ -0.55
GGA3-202ENST00000538886 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.55
GGA3-202ENST00000538886 FKBP8Q14318 412 aa11.58□□□□□ -0.56
GGA3-202ENST00000538886 NBR1Q14596 966 aa11.58□□□□□ -0.56
GGA3-202ENST00000538886 CARD14Q9BXL6 1004 aa11.58□□□□□ -0.56
GGA3-202ENST00000538886 FAM98CQ17RN3 349 aaKnown RBP11.58□□□□□ -0.56
GGA3-202ENST00000538886 QTRT2Q9H974 415 aaKnown RBP11.58□□□□□ -0.56
GGA3-202ENST00000538886 NEXMIFQ5QGS0 1516 aa11.58□□□□□ -0.56
GGA3-202ENST00000538886 SIRT1Q96EB6 747 aa11.57□□□□□ -0.56
GGA3-202ENST00000538886 TMEM131LA2VDJ0 1609 aa11.57□□□□□ -0.56
GGA3-202ENST00000538886 DIAPH1O60610 1272 aaKnown RBP11.57□□□□□ -0.56
GGA3-202ENST00000538886 ADGRL3Q9HAR2 1447 aa11.57□□□□□ -0.56
GGA3-202ENST00000538886 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
GGA3-202ENST00000538886 RALGAPBQ86X10 1494 aa11.57□□□□□ -0.56
GGA3-202ENST00000538886 SULT6B1Q6IMI4 303 aa11.56□□□□□ -0.56
GGA3-202ENST00000538886 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
GGA3-202ENST00000538886 MSH5O43196 834 aa11.56□□□□□ -0.56
GGA3-202ENST00000538886 PLEKHG3A1L390 1219 aa11.55□□□□□ -0.56
GGA3-202ENST00000538886 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
GGA3-202ENST00000538886 MYOM2P54296 1465 aa11.55□□□□□ -0.56
GGA3-202ENST00000538886 ARHGAP23Q9P227 1491 aa11.55□□□□□ -0.56
GGA3-202ENST00000538886 ANKRD24Q8TF21 1146 aa11.55□□□□□ -0.56
GGA3-202ENST00000538886 SLIT1O75093 1534 aa11.54□□□□□ -0.56
GGA3-202ENST00000538886 C1orf141Q5JVX7 400 aa11.53□□□□□ -0.56
GGA3-202ENST00000538886 C1orf167Q5SNV9 1468 aa11.53□□□□□ -0.56
GGA3-202ENST00000538886 MYO5BQ9ULV0 1848 aa11.52□□□□□ -0.56
GGA3-202ENST00000538886 AFF2P51816 1311 aa11.52□□□□□ -0.57
GGA3-202ENST00000538886 RALBP1Q15311 655 aa11.52□□□□□ -0.57
GGA3-202ENST00000538886 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
GGA3-202ENST00000538886 ACSBG1Q96GR2 724 aa11.52□□□□□ -0.57
GGA3-202ENST00000538886 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
GGA3-202ENST00000538886 LRRC7Q96NW7 1537 aa11.52□□□□□ -0.57
GGA3-202ENST00000538886 TATP17735 454 aaPredicted RBP11.52□□□□□ -0.57
GGA3-202ENST00000538886 PRKRIP1Q9H875 184 aaPredicted RBP11.52□□□□□ -0.57
GGA3-202ENST00000538886 KIAA0232Q92628 1395 aa11.52□□□□□ -0.57
GGA3-202ENST00000538886 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
GGA3-202ENST00000538886 FAM135BQ49AJ0 1406 aa11.51□□□□□ -0.57
GGA3-202ENST00000538886 LARP1Q6PKG0 1096 aaKnown RBP11.51□□□□□ -0.57
GGA3-202ENST00000538886 MROH2AA6NES4 1674 aa11.51□□□□□ -0.57
GGA3-202ENST00000538886 FAM83GA6ND36 823 aa11.51□□□□□ -0.57
GGA3-202ENST00000538886 EXOC5O00471 708 aa11.51□□□□□ -0.57
GGA3-202ENST00000538886 MAP3K19Q56UN5 1328 aa11.51□□□□□ -0.57
GGA3-202ENST00000538886 NPHP1O15259 732 aa11.5□□□□□ -0.57
GGA3-202ENST00000538886 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
GGA3-202ENST00000538886 PPP2R1AP30153 589 aa11.5□□□□□ -0.57
GGA3-202ENST00000538886 RXRBP28702 533 aa11.5□□□□□ -0.57
GGA3-202ENST00000538886 ELL2O00472 640 aaPredicted RBP11.49□□□□□ -0.57
GGA3-202ENST00000538886 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
GGA3-202ENST00000538886 IQGAP1P46940 1657 aa11.49□□□□□ -0.57
GGA3-202ENST00000538886 ARHGEF10O15013 1369 aa11.49□□□□□ -0.57
GGA3-202ENST00000538886 ANKRD36BQ8N2N9 1353 aa11.49□□□□□ -0.57
GGA3-202ENST00000538886 JCADQ9P266 1359 aa11.49□□□□□ -0.57
GGA3-202ENST00000538886 PRKAR2BP31323 418 aa11.49□□□□□ -0.57
GGA3-202ENST00000538886 TEFQ10587 303 aa11.49□□□□□ -0.57
GGA3-202ENST00000538886 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
GGA3-202ENST00000538886 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
GGA3-202ENST00000538886 DDB1Q16531 1140 aa11.48□□□□□ -0.57
GGA3-202ENST00000538886 ZNF530Q6P9A1 599 aaPredicted RBP11.48□□□□□ -0.57
GGA3-202ENST00000538886 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
GGA3-202ENST00000538886 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
GGA3-202ENST00000538886 NECTIN2Q92692 538 aa11.47□□□□□ -0.57
GGA3-202ENST00000538886 POLKQ9UBT6 870 aa11.47□□□□□ -0.57
GGA3-202ENST00000538886 TRPC5Q9UL62 973 aaPredicted RBP11.47□□□□□ -0.57
GGA3-202ENST00000538886 AEBP1Q8IUX7 1158 aa11.46□□□□□ -0.57
GGA3-202ENST00000538886 SMG6Q86US8 1419 aaKnown RBP11.46□□□□□ -0.57
GGA3-202ENST00000538886 MED14O60244 1454 aa11.46□□□□□ -0.57
GGA3-202ENST00000538886 ZNF772Q68DY9 489 aaPredicted RBP11.46□□□□□ -0.57
GGA3-202ENST00000538886 MYBBP1AQ9BQG0 1328 aaKnown RBP11.46□□□□□ -0.57
GGA3-202ENST00000538886 PTCH1Q13635 1447 aa11.46□□□□□ -0.57
GGA3-202ENST00000538886 APAF1O14727 1248 aa11.45□□□□□ -0.58
GGA3-202ENST00000538886 PTCD1O75127 700 aaKnown RBP11.45□□□□□ -0.58
GGA3-202ENST00000538886 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
GGA3-202ENST00000538886 PNNQ9H307 717 aaKnown RBP11.45□□□□□ -0.58
GGA3-202ENST00000538886 HOXC9P31274 260 aa11.45□□□□□ -0.58
GGA3-202ENST00000538886 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
GGA3-202ENST00000538886 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
GGA3-202ENST00000538886 UBE2Q2Q8WVN8 375 aa11.45□□□□□ -0.58
GGA3-202ENST00000538886 NKTRP30414 1462 aaKnown RBP11.44□□□□□ -0.58
GGA3-202ENST00000538886 MST1RQ04912 1400 aa11.44□□□□□ -0.58
GGA3-202ENST00000538886 PLEKHO1Q53GL0 409 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms