RNA–Protein interactions for RNA: ENST00000538877.5

RAP1B-218, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-218ENST00000538877 PAK3O75914 559 aaPredicted RBP34.57■■■■□ 3.12
RAP1B-218ENST00000538877 NUDT16Q96DE0 195 aaKnown RBP34.55■■■■□ 3.12
RAP1B-218ENST00000538877 PHRF1Q9P1Y6 1649 aaKnown RBP34.54■■■■□ 3.12
RAP1B-218ENST00000538877 BLMP54132 1417 aaPredicted RBP34.54■■■■□ 3.12
RAP1B-218ENST00000538877 BTG4Q9NY30 223 aa34.53■■■■□ 3.12
RAP1B-218ENST00000538877 CDK19Q9BWU1 502 aa34.51■■■■□ 3.12
RAP1B-218ENST00000538877 ONECUT3O60422 494 aaPredicted RBP34.5■■■■□ 3.11
RAP1B-218ENST00000538877 A0A0G2JS52 829 aa34.49■■■■□ 3.11
RAP1B-218ENST00000538877 MYT1Q01538 1121 aa34.49■■■■□ 3.11
RAP1B-218ENST00000538877 ZRANB1Q9UGI0 708 aa34.49■■■■□ 3.11
RAP1B-218ENST00000538877 SRCAPQ6ZRS2 3230 aa34.49■■■■□ 3.11
RAP1B-218ENST00000538877 NBPF1Q3BBV0 1214 aa34.48■■■■□ 3.11
RAP1B-218ENST00000538877 KRT27Q7Z3Y8 459 aa34.46■■■■□ 3.11
RAP1B-218ENST00000538877 QRICH2Q9H0J4 1663 aa34.46■■■■□ 3.11
RAP1B-218ENST00000538877 FAM98CQ17RN3 349 aaKnown RBP34.44■■■■□ 3.1
RAP1B-218ENST00000538877 PRDM11Q9NQV5 511 aa34.44■■■■□ 3.1
RAP1B-218ENST00000538877 POLR3AO14802 1390 aaPredicted RBP34.43■■■■□ 3.1
RAP1B-218ENST00000538877 ACEP12821 1306 aa34.41■■■■□ 3.1
RAP1B-218ENST00000538877 SF3B2Q13435 895 aaKnown RBP34.41■■■■□ 3.1
RAP1B-218ENST00000538877 DEFB132Q7Z7B7 95 aa34.41■■■■□ 3.1
RAP1B-218ENST00000538877 CCDC61Q9Y6R9 512 aa34.41■■■■□ 3.1
RAP1B-218ENST00000538877 KIAA0232Q92628 1395 aa34.4■■■■□ 3.1
RAP1B-218ENST00000538877 THSD7AQ9UPZ6 1657 aa34.39■■■■□ 3.1
RAP1B-218ENST00000538877 NUTM2GQ5VZR2 741 aa34.39■■■■□ 3.1
RAP1B-218ENST00000538877 SPATA31A5Q5VU36 1347 aa34.37■■■■□ 3.09
RAP1B-218ENST00000538877 SPATA31A7Q8IWB4 1347 aa34.37■■■■□ 3.09
RAP1B-218ENST00000538877 NBPF8Q3BBV2 869 aa34.37■■■■□ 3.09
RAP1B-218ENST00000538877 NRKQ7Z2Y5 1582 aa34.36■■■■□ 3.09
RAP1B-218ENST00000538877 CENPJQ9HC77 1338 aaPredicted RBP34.35■■■■□ 3.09
RAP1B-218ENST00000538877 PLEKHG3A1L390 1219 aa34.35■■■■□ 3.09
RAP1B-218ENST00000538877 CHRNA2Q15822 529 aa34.35■■■■□ 3.09
RAP1B-218ENST00000538877 RGPD1P0DJD0 1748 aa34.34■■■■□ 3.09
RAP1B-218ENST00000538877 SRPK2P78362 688 aaKnown RBP34.33■■■■□ 3.09
RAP1B-218ENST00000538877 TRPM1Q7Z4N2 1603 aa34.33■■■■□ 3.09
RAP1B-218ENST00000538877 PPIP5K1Q6PFW1 1433 aa34.32■■■■□ 3.08
RAP1B-218ENST00000538877 ZC3H6P61129 1189 aaKnown RBP34.32■■■■□ 3.08
RAP1B-218ENST00000538877 ABTB2Q8N961 1025 aa34.29■■■■□ 3.08
RAP1B-218ENST00000538877 L3MBTL2Q969R5 705 aa34.29■■■■□ 3.08
RAP1B-218ENST00000538877 STRN4Q9NRL3 753 aa34.29■■■■□ 3.08
RAP1B-218ENST00000538877 CABP2Q9NPB3 220 aa34.28■■■■□ 3.08
RAP1B-218ENST00000538877 SPATA31A1Q5TZJ5 1347 aa34.27■■■■□ 3.08
RAP1B-218ENST00000538877 FAM182BQ5T319 152 aa34.26■■■■□ 3.08
RAP1B-218ENST00000538877 TNS1Q9HBL0 1735 aaKnown RBP34.26■■■■□ 3.07
RAP1B-218ENST00000538877 LMO7Q8WWI1 1683 aa34.25■■■■□ 3.07
RAP1B-218ENST00000538877 BAG6P46379 1132 aa34.23■■■■□ 3.07
RAP1B-218ENST00000538877 SIN3AQ96ST3 1273 aa34.23■■■■□ 3.07
RAP1B-218ENST00000538877 USP19O94966 1318 aa34.23■■■■□ 3.07
RAP1B-218ENST00000538877 CAMTA1Q9Y6Y1 1673 aa34.22■■■■□ 3.07
RAP1B-218ENST00000538877 SSH2Q76I76 1423 aa34.21■■■■□ 3.07
RAP1B-218ENST00000538877 USP35Q9P2H5 1018 aa34.19■■■■□ 3.06
RAP1B-218ENST00000538877 CPDO75976 1380 aa34.19■■■■□ 3.06
RAP1B-218ENST00000538877 EVA1CP58658 441 aa34.18■■■■□ 3.06
RAP1B-218ENST00000538877 NEUROD1Q13562 356 aa34.17■■■■□ 3.06
RAP1B-218ENST00000538877 NLRP13Q86W25 1043 aa34.17■■■■□ 3.06
RAP1B-218ENST00000538877 USP6P35125 1406 aa34.16■■■■□ 3.06
RAP1B-218ENST00000538877 CABP1Q9NZU7 370 aa34.16■■■■□ 3.06
RAP1B-218ENST00000538877 PIK3C2AO00443 1686 aa34.15■■■■□ 3.06
RAP1B-218ENST00000538877 BRD4O60885 1362 aaPredicted RBP34.14■■■■□ 3.06
RAP1B-218ENST00000538877 ROCK2O75116 1388 aaKnown RBP34.14■■■■□ 3.06
RAP1B-218ENST00000538877 AKAP12Q02952 1782 aa34.13■■■■□ 3.05
RAP1B-218ENST00000538877 GCP02774 474 aa34.13■■■■□ 3.05
RAP1B-218ENST00000538877 EVC2Q86UK5 1308 aa34.12■■■■□ 3.05
RAP1B-218ENST00000538877 EN1Q05925 392 aaPredicted RBP34.12■■■■□ 3.05
RAP1B-218ENST00000538877 LARP1Q6PKG0 1096 aaKnown RBP34.12■■■■□ 3.05
RAP1B-218ENST00000538877 LRP5O75197 1615 aa34.11■■■■□ 3.05
RAP1B-218ENST00000538877 SLIT3O75094 1523 aa34.09■■■■□ 3.05
RAP1B-218ENST00000538877 COL5A2P05997 1499 aaPredicted RBP34.09■■■■□ 3.05
RAP1B-218ENST00000538877 BARGINQ6ZT62 677 aa34.09■■■■□ 3.05
RAP1B-218ENST00000538877 DISP2A7MBM2 1401 aa34.09■■■■□ 3.05
RAP1B-218ENST00000538877 PSDA5PKW4 1024 aaPredicted RBP34.08■■■■□ 3.05
RAP1B-218ENST00000538877 PARP4Q9UKK3 1724 aaKnown RBP34.07■■■■□ 3.05
RAP1B-218ENST00000538877 ZBTB7CA1YPR0 619 aa34.06■■■■□ 3.04
RAP1B-218ENST00000538877 NLRP6P59044 892 aa34.06■■■■□ 3.04
RAP1B-218ENST00000538877 FAM196AQ6ZSG2 479 aa34.06■■■■□ 3.04
RAP1B-218ENST00000538877 TCP11L2Q8N4U5 519 aa34.06■■■■□ 3.04
RAP1B-218ENST00000538877 TRIM37O94972 964 aa34.05■■■■□ 3.04
RAP1B-218ENST00000538877 COL18A1P39060 1754 aa34.03■■■■□ 3.04
RAP1B-218ENST00000538877 PDE3BQ13370 1112 aa34.03■■■■□ 3.04
RAP1B-218ENST00000538877 RGPD5Q99666 1765 aa34.03■■■■□ 3.04
RAP1B-218ENST00000538877 WNK3Q9BYP7 1800 aa34■■■■□ 3.03
RAP1B-218ENST00000538877 CRB1P82279 1406 aa33.99■■■■□ 3.03
RAP1B-218ENST00000538877 EZH2Q15910 746 aaKnown RBP33.99■■■■□ 3.03
RAP1B-218ENST00000538877 THRAP3Q9Y2W1 955 aaKnown RBP33.99■■■■□ 3.03
RAP1B-218ENST00000538877 MON2Q7Z3U7 1717 aa33.98■■■■□ 3.03
RAP1B-218ENST00000538877 AATKQ6ZMQ8 1374 aa33.98■■■■□ 3.03
RAP1B-218ENST00000538877 RREB1Q92766 1687 aa33.97■■■■□ 3.03
RAP1B-218ENST00000538877 LRRC37A3O60309 1634 aa33.96■■■■□ 3.03
RAP1B-218ENST00000538877 APBA3O96018 575 aa33.94■■■■□ 3.02
RAP1B-218ENST00000538877 TTC21BQ7Z4L5 1316 aa33.94■■■■□ 3.02
RAP1B-218ENST00000538877 NUP188Q5SRE5 1749 aa33.93■■■■□ 3.02
RAP1B-218ENST00000538877 CAMKK2Q96RR4 588 aa33.93■■■■□ 3.02
RAP1B-218ENST00000538877 ZNF692Q9BU19 519 aaPredicted RBP33.93■■■■□ 3.02
RAP1B-218ENST00000538877 SBF2Q86WG5 1849 aa33.93■■■■□ 3.02
RAP1B-218ENST00000538877 R3HDM1Q15032 1099 aaKnown RBP33.92■■■■□ 3.02
RAP1B-218ENST00000538877 CPSF1Q10570 1443 aaKnown RBP33.92■■■■□ 3.02
RAP1B-218ENST00000538877 PEAK1Q9H792 1746 aa33.9■■■■□ 3.02
RAP1B-218ENST00000538877 KTN1Q86UP2 1357 aaKnown RBP33.89■■■■□ 3.02
RAP1B-218ENST00000538877 PARD3Q8TEW0 1356 aa33.89■■■■□ 3.02
RAP1B-218ENST00000538877 SOX12O15370 315 aa33.89■■■■□ 3.02
RAP1B-218ENST00000538877 TTC21AQ8NDW8 1320 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms