RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CD163L1Q9NR16 1453 aa19.44■□□□□ 0.7
CD9-208ENST00000538834 ST20-MTHFSA0A0A6YYL1 179 aa19.44■□□□□ 0.7
CD9-208ENST00000538834 CABP1Q9NZU7 370 aa19.44■□□□□ 0.7
CD9-208ENST00000538834 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
CD9-208ENST00000538834 USP47Q96K76 1375 aa19.43■□□□□ 0.7
CD9-208ENST00000538834 PLCH1Q4KWH8 1693 aa19.43■□□□□ 0.7
CD9-208ENST00000538834 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
CD9-208ENST00000538834 USP6P35125 1406 aa19.42■□□□□ 0.7
CD9-208ENST00000538834 SLIT2O94813 1529 aa19.42■□□□□ 0.7
CD9-208ENST00000538834 AFF2P51816 1311 aa19.42■□□□□ 0.7
CD9-208ENST00000538834 BCL9LQ86UU0 1499 aa19.41■□□□□ 0.7
CD9-208ENST00000538834 PIK3C2AO00443 1686 aa19.41■□□□□ 0.7
CD9-208ENST00000538834 ZNF772Q68DY9 489 aaPredicted RBP19.41■□□□□ 0.7
CD9-208ENST00000538834 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
CD9-208ENST00000538834 NRAPQ86VF7 1730 aa19.39■□□□□ 0.7
CD9-208ENST00000538834 MEX3CQ5U5Q3 659 aaKnown RBP19.39■□□□□ 0.69
CD9-208ENST00000538834 ADAMTS2O95450 1211 aa19.38■□□□□ 0.69
CD9-208ENST00000538834 COL14A1Q05707 1796 aaKnown RBP19.38■□□□□ 0.69
CD9-208ENST00000538834 CABLES1Q8TDN4 633 aa19.38■□□□□ 0.69
CD9-208ENST00000538834 USP19O94966 1318 aa19.37■□□□□ 0.69
CD9-208ENST00000538834 C8orf37Q96NL8 207 aa19.37■□□□□ 0.69
CD9-208ENST00000538834 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
CD9-208ENST00000538834 CDK12Q9NYV4 1490 aaPredicted RBP19.36■□□□□ 0.69
CD9-208ENST00000538834 ATRNO75882 1429 aa19.36■□□□□ 0.69
CD9-208ENST00000538834 MYOM1P52179 1685 aa19.36■□□□□ 0.69
CD9-208ENST00000538834 SLIT3O75094 1523 aa19.35■□□□□ 0.69
CD9-208ENST00000538834 NGLY1Q96IV0 654 aa19.35■□□□□ 0.69
CD9-208ENST00000538834 COL18A1P39060 1754 aa19.34■□□□□ 0.69
CD9-208ENST00000538834 LMO7Q8WWI1 1683 aa19.33■□□□□ 0.69
CD9-208ENST00000538834 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.69
CD9-208ENST00000538834 SOCS7O14512 581 aa19.33■□□□□ 0.68
CD9-208ENST00000538834 FAM83GA6ND36 823 aa19.32■□□□□ 0.68
CD9-208ENST00000538834 PAK3O75914 559 aaPredicted RBP19.32■□□□□ 0.68
CD9-208ENST00000538834 TTC21BQ7Z4L5 1316 aa19.31■□□□□ 0.68
CD9-208ENST00000538834 LMOD2Q6P5Q4 547 aa19.31■□□□□ 0.68
CD9-208ENST00000538834 SLC12A5Q9H2X9 1139 aa19.31■□□□□ 0.68
CD9-208ENST00000538834 QTRT2Q9H974 415 aaKnown RBP19.31■□□□□ 0.68
CD9-208ENST00000538834 USP21Q9UK80 565 aa19.31■□□□□ 0.68
CD9-208ENST00000538834 GLI3P10071 1580 aa19.31■□□□□ 0.68
CD9-208ENST00000538834 TTC21AQ8NDW8 1320 aa19.3■□□□□ 0.68
CD9-208ENST00000538834 ABTB2Q8N961 1025 aa19.3■□□□□ 0.68
CD9-208ENST00000538834 CPDO75976 1380 aa19.3■□□□□ 0.68
CD9-208ENST00000538834 USP31Q70CQ4 1352 aa19.29■□□□□ 0.68
CD9-208ENST00000538834 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
CD9-208ENST00000538834 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
CD9-208ENST00000538834 TMF1P82094 1093 aa19.28■□□□□ 0.68
CD9-208ENST00000538834 NLRP13Q86W25 1043 aa19.28■□□□□ 0.68
CD9-208ENST00000538834 UNC5CLQ8IV45 518 aa19.28■□□□□ 0.68
CD9-208ENST00000538834 TRPC5Q9UL62 973 aaPredicted RBP19.28■□□□□ 0.68
CD9-208ENST00000538834 RGPD5Q99666 1765 aa19.28■□□□□ 0.68
CD9-208ENST00000538834 A0A1W2PP64 1363 aa19.28■□□□□ 0.68
CD9-208ENST00000538834 EDC4Q6P2E9 1401 aaKnown RBP19.27■□□□□ 0.68
CD9-208ENST00000538834 RXRBP28702 533 aa19.27■□□□□ 0.68
CD9-208ENST00000538834 BRWD3Q6RI45 1802 aa19.27■□□□□ 0.68
CD9-208ENST00000538834 NFAT5O94916 1531 aa19.25■□□□□ 0.67
CD9-208ENST00000538834 KIAA0232Q92628 1395 aa19.25■□□□□ 0.67
CD9-208ENST00000538834 GCP02774 474 aa19.25■□□□□ 0.67
CD9-208ENST00000538834 CAMTA1Q9Y6Y1 1673 aa19.24■□□□□ 0.67
CD9-208ENST00000538834 ANKRD36BQ8N2N9 1353 aa19.24■□□□□ 0.67
CD9-208ENST00000538834 NUTM2GQ5VZR2 741 aa19.24■□□□□ 0.67
CD9-208ENST00000538834 RGS12O14924 1447 aa19.24■□□□□ 0.67
CD9-208ENST00000538834 HSPA5P11021 654 aaKnown RBP19.23■□□□□ 0.67
CD9-208ENST00000538834 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.67
CD9-208ENST00000538834 VPS72Q15906 364 aa19.23■□□□□ 0.67
CD9-208ENST00000538834 GJD4Q96KN9 370 aaPredicted RBP19.23■□□□□ 0.67
CD9-208ENST00000538834 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
CD9-208ENST00000538834 LTN1O94822 1766 aa19.22■□□□□ 0.67
CD9-208ENST00000538834 ONECUT3O60422 494 aaPredicted RBP19.22■□□□□ 0.67
CD9-208ENST00000538834 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
CD9-208ENST00000538834 NLRP6P59044 892 aa19.22■□□□□ 0.67
CD9-208ENST00000538834 CDCA8Q53HL2 280 aa19.22■□□□□ 0.67
CD9-208ENST00000538834 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
CD9-208ENST00000538834 OVOS2A0A0J9YW53 1432 aa19.21■□□□□ 0.67
CD9-208ENST00000538834 OVOS2Q6IE36 1432 aa19.21■□□□□ 0.67
CD9-208ENST00000538834 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
CD9-208ENST00000538834 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
CD9-208ENST00000538834 ABCC6O95255 1503 aa19.2■□□□□ 0.66
CD9-208ENST00000538834 BTG4Q9NY30 223 aa19.19■□□□□ 0.66
CD9-208ENST00000538834 AATKQ6ZMQ8 1374 aa19.19■□□□□ 0.66
CD9-208ENST00000538834 THSD7AQ9UPZ6 1657 aa19.18■□□□□ 0.66
CD9-208ENST00000538834 ZC3H6P61129 1189 aaKnown RBP19.18■□□□□ 0.66
CD9-208ENST00000538834 ARHGEF25Q86VW2 580 aa19.18■□□□□ 0.66
CD9-208ENST00000538834 PRDM11Q9NQV5 511 aa19.18■□□□□ 0.66
CD9-208ENST00000538834 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
CD9-208ENST00000538834 EP400Q96L91 3159 aa19.18■□□□□ 0.66
CD9-208ENST00000538834 PLEKHG5O94827 1062 aa19.17■□□□□ 0.66
CD9-208ENST00000538834 NME9Q86XW9 330 aa19.17■□□□□ 0.66
CD9-208ENST00000538834 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
CD9-208ENST00000538834 CHRNA2Q15822 529 aa19.16■□□□□ 0.66
CD9-208ENST00000538834 KCNH5Q8NCM2 988 aa19.16■□□□□ 0.66
CD9-208ENST00000538834 SPATA31A5Q5VU36 1347 aa19.16■□□□□ 0.66
CD9-208ENST00000538834 SPATA31A7Q8IWB4 1347 aa19.16■□□□□ 0.66
CD9-208ENST00000538834 CARD14Q9BXL6 1004 aa19.15■□□□□ 0.66
CD9-208ENST00000538834 COL5A2P05997 1499 aaPredicted RBP19.15■□□□□ 0.66
CD9-208ENST00000538834 WNK3Q9BYP7 1800 aa19.14■□□□□ 0.65
CD9-208ENST00000538834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
CD9-208ENST00000538834 ANKRD26Q9UPS8 1709 aa19.14■□□□□ 0.65
CD9-208ENST00000538834 FYB1O15117 783 aa19.12■□□□□ 0.65
CD9-208ENST00000538834 SPATA31A1Q5TZJ5 1347 aa19.11■□□□□ 0.65
CD9-208ENST00000538834 AXIN2Q9Y2T1 843 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms