RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 MAP3K9P80192 1104 aa9.16□□□□□ -0.94
SP140-212ENST00000538494 ANKK1Q8NFD2 765 aa9.16□□□□□ -0.94
SP140-212ENST00000538494 RYDENQ9NUL5 291 aaKnown RBP9.16□□□□□ -0.94
SP140-212ENST00000538494 GPATCH8Q9UKJ3 1502 aaKnown RBP9.15□□□□□ -0.94
SP140-212ENST00000538494 PLEKHH2Q8IVE3 1493 aa9.15□□□□□ -0.94
SP140-212ENST00000538494 LRRIQ1Q96JM4 1722 aa9.15□□□□□ -0.94
SP140-212ENST00000538494 RBM6P78332 1123 aaKnown RBP9.15□□□□□ -0.94
SP140-212ENST00000538494 PROX2Q3B8N5 592 aa9.15□□□□□ -0.94
SP140-212ENST00000538494 ABCC3O15438 1527 aa9.15□□□□□ -0.95
SP140-212ENST00000538494 PRDM15P57071 1507 aaPredicted RBP9.15□□□□□ -0.95
SP140-212ENST00000538494 NCOA2Q15596 1464 aa9.15□□□□□ -0.95
SP140-212ENST00000538494 SHPRHQ149N8 1683 aa9.14□□□□□ -0.95
SP140-212ENST00000538494 RANGAP1P46060 587 aaPredicted RBP9.14□□□□□ -0.95
SP140-212ENST00000538494 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
SP140-212ENST00000538494 LARP6Q9BRS8 491 aaKnown RBP9.14□□□□□ -0.95
SP140-212ENST00000538494 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
SP140-212ENST00000538494 LRP5O75197 1615 aa9.13□□□□□ -0.95
SP140-212ENST00000538494 WASHC2CQ9Y4E1 1318 aa9.13□□□□□ -0.95
SP140-212ENST00000538494 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
SP140-212ENST00000538494 BCAMP50895 628 aa9.13□□□□□ -0.95
SP140-212ENST00000538494 Q6ZNB5 142 aa9.13□□□□□ -0.95
SP140-212ENST00000538494 RBM33Q96EV2 1170 aaKnown RBP9.13□□□□□ -0.95
SP140-212ENST00000538494 UBR1Q8IWV7 1749 aa9.13□□□□□ -0.95
SP140-212ENST00000538494 ITGBL1O95965 494 aaPredicted RBP9.12□□□□□ -0.95
SP140-212ENST00000538494 TXNDC2Q86VQ3 553 aa9.12□□□□□ -0.95
SP140-212ENST00000538494 MBD5Q9P267 1494 aa9.12□□□□□ -0.95
SP140-212ENST00000538494 TET3O43151 1660 aa9.12□□□□□ -0.95
SP140-212ENST00000538494 AHDC1Q5TGY3 1603 aaPredicted RBP9.12□□□□□ -0.95
SP140-212ENST00000538494 TIAM1Q13009 1591 aa9.12□□□□□ -0.95
SP140-212ENST00000538494 ATAD2Q6PL18 1390 aa9.12□□□□□ -0.95
SP140-212ENST00000538494 AFF2P51816 1311 aa9.11□□□□□ -0.95
SP140-212ENST00000538494 KIF3BO15066 747 aa9.11□□□□□ -0.95
SP140-212ENST00000538494 COL9A1P20849 921 aa9.11□□□□□ -0.95
SP140-212ENST00000538494 MEX3CQ5U5Q3 659 aaKnown RBP9.11□□□□□ -0.95
SP140-212ENST00000538494 QTRT2Q9H974 415 aaKnown RBP9.11□□□□□ -0.95
SP140-212ENST00000538494 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
SP140-212ENST00000538494 NCOA3Q9Y6Q9 1424 aa9.11□□□□□ -0.95
SP140-212ENST00000538494 NKTRP30414 1462 aaKnown RBP9.1□□□□□ -0.95
SP140-212ENST00000538494 CAMSAP2Q08AD1 1489 aa9.1□□□□□ -0.95
SP140-212ENST00000538494 ARHGAP35Q9NRY4 1499 aa9.1□□□□□ -0.95
SP140-212ENST00000538494 PROSER2Q86WR7 435 aaPredicted RBP9.1□□□□□ -0.95
SP140-212ENST00000538494 DDX27Q96GQ7 796 aaKnown RBP9.1□□□□□ -0.95
SP140-212ENST00000538494 DIP2AQ14689 1571 aa9.1□□□□□ -0.95
SP140-212ENST00000538494 NWD1Q149M9 1564 aa9.1□□□□□ -0.95
SP140-212ENST00000538494 ERVK-7P63135 1459 aa9.09□□□□□ -0.95
SP140-212ENST00000538494 AMER1Q5JTC6 1135 aaPredicted RBP9.09□□□□□ -0.95
SP140-212ENST00000538494 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
SP140-212ENST00000538494 ATP1B4Q9UN42 357 aaPredicted RBP9.09□□□□□ -0.95
SP140-212ENST00000538494 MSH6P52701 1360 aa9.09□□□□□ -0.95
SP140-212ENST00000538494 SOWAHBA6NEL2 793 aa9.08□□□□□ -0.96
SP140-212ENST00000538494 KIAA1468Q9P260 1216 aa9.08□□□□□ -0.96
SP140-212ENST00000538494 EEA1Q15075 1411 aa9.07□□□□□ -0.96
SP140-212ENST00000538494 NUTM2BA6NNL0 878 aaPredicted RBP9.07□□□□□ -0.96
SP140-212ENST00000538494 NUTM2EB1AL46 878 aaPredicted RBP9.07□□□□□ -0.96
SP140-212ENST00000538494 KCNC4Q03721 635 aa9.07□□□□□ -0.96
SP140-212ENST00000538494 NUTM2DQ5VT03 806 aaPredicted RBP9.07□□□□□ -0.96
SP140-212ENST00000538494 LAPTM4BQ86VI4 370 aa9.07□□□□□ -0.96
SP140-212ENST00000538494 NUTM2AQ8IVF1 878 aaPredicted RBP9.07□□□□□ -0.96
SP140-212ENST00000538494 NGLY1Q96IV0 654 aa9.07□□□□□ -0.96
SP140-212ENST00000538494 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
SP140-212ENST00000538494 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
SP140-212ENST00000538494 EID1Q9Y6B2 187 aa9.07□□□□□ -0.96
SP140-212ENST00000538494 TMEM2Q9UHN6 1383 aa9.07□□□□□ -0.96
SP140-212ENST00000538494 CCDC18Q5T9S5 1454 aa9.07□□□□□ -0.96
SP140-212ENST00000538494 SETD5Q9C0A6 1442 aa9.06□□□□□ -0.96
SP140-212ENST00000538494 TYW1BQ6NUM6 668 aa9.06□□□□□ -0.96
SP140-212ENST00000538494 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
SP140-212ENST00000538494 CFDP1Q9UEE9 299 aaPredicted RBP9.06□□□□□ -0.96
SP140-212ENST00000538494 RTN4Q9NQC3 1192 aaKnown RBP9.05□□□□□ -0.96
SP140-212ENST00000538494 CASKIN1Q8WXD9 1431 aa9.05□□□□□ -0.96
SP140-212ENST00000538494 KDM5AP29375 1690 aaKnown RBP9.04□□□□□ -0.96
SP140-212ENST00000538494 NYAP1Q6ZVC0 841 aa9.04□□□□□ -0.96
SP140-212ENST00000538494 FBXW7Q969H0 707 aa9.04□□□□□ -0.96
SP140-212ENST00000538494 SEPT9Q9UHD8 586 aaPredicted RBP9.04□□□□□ -0.96
SP140-212ENST00000538494 NHSL1Q5SYE7 1610 aa9.04□□□□□ -0.96
SP140-212ENST00000538494 ARHGAP31Q2M1Z3 1444 aa9.04□□□□□ -0.96
SP140-212ENST00000538494 PHF14O94880 888 aa9.03□□□□□ -0.96
SP140-212ENST00000538494 GTPBP6O43824 516 aaPredicted RBP9.02□□□□□ -0.97
SP140-212ENST00000538494 MFSD10Q14728 455 aa9.02□□□□□ -0.97
SP140-212ENST00000538494 RSPH4AQ5TD94 716 aa9.02□□□□□ -0.97
SP140-212ENST00000538494 ZNF644Q9H582 1327 aaPredicted RBP9.02□□□□□ -0.97
SP140-212ENST00000538494 CHD2O14647 1828 aaKnown RBP9.01□□□□□ -0.97
SP140-212ENST00000538494 BRINP3Q76B58 766 aa9.01□□□□□ -0.97
SP140-212ENST00000538494 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
SP140-212ENST00000538494 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
SP140-212ENST00000538494 SLC26A8Q96RN1 970 aa9.01□□□□□ -0.97
SP140-212ENST00000538494 C19orf44Q9H6X5 657 aa9.01□□□□□ -0.97
SP140-212ENST00000538494 MROH1Q8NDA8 1641 aa9.01□□□□□ -0.97
SP140-212ENST00000538494 BCL9LQ86UU0 1499 aa9.01□□□□□ -0.97
SP140-212ENST00000538494 C6orf132Q5T0Z8 1188 aa9□□□□□ -0.97
SP140-212ENST00000538494 LRRC59Q96AG4 307 aaKnown RBP9□□□□□ -0.97
SP140-212ENST00000538494 CCNB3Q8WWL7 1395 aa8.99□□□□□ -0.97
SP140-212ENST00000538494 MAST1Q9Y2H9 1570 aa8.99□□□□□ -0.97
SP140-212ENST00000538494 BLMP54132 1417 aaPredicted RBP8.99□□□□□ -0.97
SP140-212ENST00000538494 ONECUT3O60422 494 aaPredicted RBP8.99□□□□□ -0.97
SP140-212ENST00000538494 HRCP23327 699 aa8.99□□□□□ -0.97
SP140-212ENST00000538494 C8orf37Q96NL8 207 aa8.99□□□□□ -0.97
SP140-212ENST00000538494 TRPC5Q9UL62 973 aaPredicted RBP8.99□□□□□ -0.97
SP140-212ENST00000538494 CFAP65Q6ZU64 1925 aaKnown RBP8.99□□□□□ -0.97
SP140-212ENST00000538494 ATRNO75882 1429 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms