RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 LTKP29376 864 aa14.38□□□□□ -0.11
SEMA4D-221ENST00000537934 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.38□□□□□ -0.11
SEMA4D-221ENST00000537934 YTHDC2Q9H6S0 1430 aaKnown RBP14.38□□□□□ -0.11
SEMA4D-221ENST00000537934 SMAP1Q8IYB5 467 aaPredicted RBP14.37□□□□□ -0.11
SEMA4D-221ENST00000537934 SETD1AO15047 1707 aaKnown RBP14.37□□□□□ -0.11
SEMA4D-221ENST00000537934 OFD1O75665 1012 aa14.36□□□□□ -0.11
SEMA4D-221ENST00000537934 PANK3Q9H999 370 aa14.36□□□□□ -0.11
SEMA4D-221ENST00000537934 SBNO2Q9Y2G9 1366 aa14.36□□□□□ -0.11
SEMA4D-221ENST00000537934 DUSP27Q5VZP5 1158 aa14.36□□□□□ -0.11
SEMA4D-221ENST00000537934 TBC1D32Q96NH3 1257 aa14.36□□□□□ -0.11
SEMA4D-221ENST00000537934 UPF2Q9HAU5 1272 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-221ENST00000537934 CHMP5Q9NZZ3 219 aa14.36□□□□□ -0.11
SEMA4D-221ENST00000537934 RIPK4P57078 832 aa14.35□□□□□ -0.11
SEMA4D-221ENST00000537934 PDE4CQ08493 712 aa14.35□□□□□ -0.11
SEMA4D-221ENST00000537934 DDX11L8A8MPP1 907 aa14.35□□□□□ -0.11
SEMA4D-221ENST00000537934 METP08581 1390 aa14.35□□□□□ -0.11
SEMA4D-221ENST00000537934 CDCA8Q53HL2 280 aa14.35□□□□□ -0.11
SEMA4D-221ENST00000537934 MYOM1P52179 1685 aa14.34□□□□□ -0.11
SEMA4D-221ENST00000537934 PER1O15534 1290 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-221ENST00000537934 HDGFP51858 240 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-221ENST00000537934 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
SEMA4D-221ENST00000537934 PRAM1Q96QH2 718 aa14.34□□□□□ -0.11
SEMA4D-221ENST00000537934 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-221ENST00000537934 IGHDP01880 384 aa14.33□□□□□ -0.12
SEMA4D-221ENST00000537934 CEP170BQ9Y4F5 1589 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-221ENST00000537934 SLIT1O75093 1534 aa14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 ZSCAN30Q86W11 494 aa14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 THEMISQ8N1K5 641 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 BCL11BQ9C0K0 894 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 ARHGAP23Q9P227 1491 aa14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 ADAMTS13Q76LX8 1427 aa14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 MINK1Q8N4C8 1332 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 MTERF4Q7Z6M4 381 aaKnown RBP14.31□□□□□ -0.12
SEMA4D-221ENST00000537934 CCDC173Q0VFZ6 552 aa14.3□□□□□ -0.12
SEMA4D-221ENST00000537934 WAPLQ7Z5K2 1190 aa14.3□□□□□ -0.12
SEMA4D-221ENST00000537934 SLC26A8Q96RN1 970 aa14.3□□□□□ -0.12
SEMA4D-221ENST00000537934 EID1Q9Y6B2 187 aa14.3□□□□□ -0.12
SEMA4D-221ENST00000537934 PLEKHG1Q9ULL1 1385 aa14.3□□□□□ -0.12
SEMA4D-221ENST00000537934 PPP1R9BQ96SB3 815 aa14.3□□□□□ -0.12
SEMA4D-221ENST00000537934 PLEKHH1Q9ULM0 1364 aa14.3□□□□□ -0.12
SEMA4D-221ENST00000537934 CC2D1BQ5T0F9 858 aaKnown RBP14.29□□□□□ -0.12
SEMA4D-221ENST00000537934 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
SEMA4D-221ENST00000537934 FAM13BQ9NYF5 915 aa14.29□□□□□ -0.12
SEMA4D-221ENST00000537934 GOLGA2Q08379 1002 aa14.28□□□□□ -0.12
SEMA4D-221ENST00000537934 GAS2L3Q86XJ1 694 aa14.28□□□□□ -0.12
SEMA4D-221ENST00000537934 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
SEMA4D-221ENST00000537934 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
SEMA4D-221ENST00000537934 EVC2Q86UK5 1308 aa14.28□□□□□ -0.12
SEMA4D-221ENST00000537934 UTP14CQ5TAP6 766 aaKnown RBP14.28□□□□□ -0.12
SEMA4D-221ENST00000537934 SLC12A5Q9H2X9 1139 aa14.27□□□□□ -0.12
SEMA4D-221ENST00000537934 ABCC11Q96J66 1382 aa14.27□□□□□ -0.13
SEMA4D-221ENST00000537934 SETD1BQ9UPS6 1966 aaKnown RBP14.26□□□□□ -0.13
SEMA4D-221ENST00000537934 MSNP26038 577 aaKnown RBP14.26□□□□□ -0.13
SEMA4D-221ENST00000537934 ADAMTS8Q9UP79 889 aa14.26□□□□□ -0.13
SEMA4D-221ENST00000537934 DLC1Q96QB1 1528 aa14.25□□□□□ -0.13
SEMA4D-221ENST00000537934 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
SEMA4D-221ENST00000537934 SLFN5Q08AF3 891 aa14.25□□□□□ -0.13
SEMA4D-221ENST00000537934 SKOR2Q2VWA4 1001 aaPredicted RBP14.25□□□□□ -0.13
SEMA4D-221ENST00000537934 KNSTRNQ9Y448 316 aa14.25□□□□□ -0.13
SEMA4D-221ENST00000537934 SRPK2P78362 688 aaKnown RBP14.25□□□□□ -0.13
SEMA4D-221ENST00000537934 CARD14Q9BXL6 1004 aa14.25□□□□□ -0.13
SEMA4D-221ENST00000537934 ZNF142P52746 1687 aaPredicted RBP14.25□□□□□ -0.13
SEMA4D-221ENST00000537934 MED14O60244 1454 aa14.24□□□□□ -0.13
SEMA4D-221ENST00000537934 TRMT2AQ8IZ69 625 aaKnown RBP14.24□□□□□ -0.13
SEMA4D-221ENST00000537934 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
SEMA4D-221ENST00000537934 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
SEMA4D-221ENST00000537934 PTMSP20962 102 aa14.23□□□□□ -0.13
SEMA4D-221ENST00000537934 ROBO2Q9HCK4 1378 aa14.23□□□□□ -0.13
SEMA4D-221ENST00000537934 PTPRUQ92729 1446 aa14.23□□□□□ -0.13
SEMA4D-221ENST00000537934 DMTNQ08495 405 aa14.23□□□□□ -0.13
SEMA4D-221ENST00000537934 CLUAP1Q96AJ1 413 aa14.23□□□□□ -0.13
SEMA4D-221ENST00000537934 R3HCC1Q9Y3T6 440 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-221ENST00000537934 NCLP19338 710 aaKnown RBP14.22□□□□□ -0.13
SEMA4D-221ENST00000537934 PDE3AQ14432 1141 aa14.22□□□□□ -0.13
SEMA4D-221ENST00000537934 TECPR2O15040 1411 aa14.22□□□□□ -0.13
SEMA4D-221ENST00000537934 KNDC1Q76NI1 1749 aa14.22□□□□□ -0.13
SEMA4D-221ENST00000537934 DYNC1I1O14576 645 aa14.22□□□□□ -0.13
SEMA4D-221ENST00000537934 HS1BP3Q53T59 392 aa14.22□□□□□ -0.13
SEMA4D-221ENST00000537934 ANP32BQ92688 251 aaKnown RBP14.22□□□□□ -0.13
SEMA4D-221ENST00000537934 DDIT3P35638 169 aa14.21□□□□□ -0.13
SEMA4D-221ENST00000537934 CDK19Q9BWU1 502 aa14.21□□□□□ -0.13
SEMA4D-221ENST00000537934 ZHX1Q9UKY1 873 aaPredicted RBP14.21□□□□□ -0.13
SEMA4D-221ENST00000537934 CPS1P31327 1500 aa14.21□□□□□ -0.13
SEMA4D-221ENST00000537934 NASPP49321 788 aaPredicted RBP14.21□□□□□ -0.13
SEMA4D-221ENST00000537934 NKTRP30414 1462 aaKnown RBP14.21□□□□□ -0.13
SEMA4D-221ENST00000537934 UQCRHLA0A096LP55 91 aa14.21□□□□□ -0.14
SEMA4D-221ENST00000537934 BCAR3O75815 825 aa14.21□□□□□ -0.14
SEMA4D-221ENST00000537934 UQCRHP07919 91 aa14.21□□□□□ -0.14
SEMA4D-221ENST00000537934 NINLQ9Y2I6 1382 aa14.2□□□□□ -0.14
SEMA4D-221ENST00000537934 ZNF500O60304 480 aaPredicted RBP14.2□□□□□ -0.14
SEMA4D-221ENST00000537934 TBX22Q9Y458 520 aa14.2□□□□□ -0.14
SEMA4D-221ENST00000537934 NCOA3Q9Y6Q9 1424 aa14.2□□□□□ -0.14
SEMA4D-221ENST00000537934 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
SEMA4D-221ENST00000537934 GBP4Q96PP9 640 aa14.2□□□□□ -0.14
SEMA4D-221ENST00000537934 FAM135BQ49AJ0 1406 aa14.19□□□□□ -0.14
SEMA4D-221ENST00000537934 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
SEMA4D-221ENST00000537934 C22orf23Q9BZE7 217 aa14.19□□□□□ -0.14
SEMA4D-221ENST00000537934 AMOTL2Q9Y2J4 779 aa14.19□□□□□ -0.14
SEMA4D-221ENST00000537934 NSD3Q9BZ95 1437 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms