RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CD163L1Q9NR16 1453 aa18.31■□□□□ 0.52
USP44-203ENST00000537435 MYO5BQ9ULV0 1848 aa18.3■□□□□ 0.52
USP44-203ENST00000537435 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
USP44-203ENST00000537435 PREX1Q8TCU6 1659 aa18.3■□□□□ 0.52
USP44-203ENST00000537435 FBXO31Q5XUX0 539 aaPredicted RBP18.3■□□□□ 0.52
USP44-203ENST00000537435 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
USP44-203ENST00000537435 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
USP44-203ENST00000537435 MED14O60244 1454 aa18.28■□□□□ 0.52
USP44-203ENST00000537435 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
USP44-203ENST00000537435 CDK19Q9BWU1 502 aa18.28■□□□□ 0.52
USP44-203ENST00000537435 DIAPH1O60610 1272 aaKnown RBP18.27■□□□□ 0.51
USP44-203ENST00000537435 ZMYM3Q14202 1370 aa18.27■□□□□ 0.51
USP44-203ENST00000537435 RIPK4P57078 832 aa18.26■□□□□ 0.51
USP44-203ENST00000537435 GSE1Q14687 1217 aa18.26■□□□□ 0.51
USP44-203ENST00000537435 SSH1Q8WYL5 1049 aa18.26■□□□□ 0.51
USP44-203ENST00000537435 CLTCQ00610 1675 aaKnown RBP18.26■□□□□ 0.51
USP44-203ENST00000537435 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
USP44-203ENST00000537435 STAG3Q9UJ98 1225 aa18.26■□□□□ 0.51
USP44-203ENST00000537435 IL16Q14005 1332 aa18.25■□□□□ 0.51
USP44-203ENST00000537435 TRIM27P14373 513 aa18.25■□□□□ 0.51
USP44-203ENST00000537435 ALKQ9UM73 1620 aa18.25■□□□□ 0.51
USP44-203ENST00000537435 FRAT2O75474 233 aaPredicted RBP18.24■□□□□ 0.51
USP44-203ENST00000537435 ARHGEF40Q8TER5 1519 aa18.24■□□□□ 0.51
USP44-203ENST00000537435 PNPLA6Q8IY17 1366 aa18.24■□□□□ 0.51
USP44-203ENST00000537435 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
USP44-203ENST00000537435 BECN1Q14457 450 aa18.23■□□□□ 0.51
USP44-203ENST00000537435 ATF7IPQ6VMQ6 1270 aa18.23■□□□□ 0.51
USP44-203ENST00000537435 UPF2Q9HAU5 1272 aaKnown RBP18.23■□□□□ 0.51
USP44-203ENST00000537435 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
USP44-203ENST00000537435 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
USP44-203ENST00000537435 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
USP44-203ENST00000537435 DDX19BQ9UMR2 479 aa18.22■□□□□ 0.51
USP44-203ENST00000537435 TBC1D32Q96NH3 1257 aa18.21■□□□□ 0.5
USP44-203ENST00000537435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
USP44-203ENST00000537435 FCHSD2O94868 740 aa18.19■□□□□ 0.5
USP44-203ENST00000537435 HDAC1Q13547 482 aaPredicted RBP18.19■□□□□ 0.5
USP44-203ENST00000537435 WAPLQ7Z5K2 1190 aa18.19■□□□□ 0.5
USP44-203ENST00000537435 IL27Q8NEV9 243 aa18.19■□□□□ 0.5
USP44-203ENST00000537435 FBLN1P23142 703 aa18.18■□□□□ 0.5
USP44-203ENST00000537435 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
USP44-203ENST00000537435 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
USP44-203ENST00000537435 RSPH6AQ9H0K4 717 aa18.17■□□□□ 0.5
USP44-203ENST00000537435 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
USP44-203ENST00000537435 KIF16BQ96L93 1317 aa18.17■□□□□ 0.5
USP44-203ENST00000537435 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
USP44-203ENST00000537435 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
USP44-203ENST00000537435 IPO8O15397 1037 aaKnown RBP18.15■□□□□ 0.5
USP44-203ENST00000537435 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
USP44-203ENST00000537435 KIF20BQ96Q89 1820 aa18.15■□□□□ 0.5
USP44-203ENST00000537435 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
USP44-203ENST00000537435 CDC42BPGQ6DT37 1551 aa18.14■□□□□ 0.5
USP44-203ENST00000537435 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.5
USP44-203ENST00000537435 ZBTB40Q9NUA8 1239 aa18.14■□□□□ 0.5
USP44-203ENST00000537435 DLC1Q96QB1 1528 aa18.14■□□□□ 0.49
USP44-203ENST00000537435 FAM69CQ0P6D2 419 aa18.14■□□□□ 0.49
USP44-203ENST00000537435 SMC5Q8IY18 1101 aa18.14■□□□□ 0.49
USP44-203ENST00000537435 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.49
USP44-203ENST00000537435 ATP7BP35670 1465 aa18.14■□□□□ 0.49
USP44-203ENST00000537435 TBC1D2Q9BYX2 928 aa18.13■□□□□ 0.49
USP44-203ENST00000537435 RIMS2Q9UQ26 1411 aa18.13■□□□□ 0.49
USP44-203ENST00000537435 HMOX1P09601 288 aa18.12■□□□□ 0.49
USP44-203ENST00000537435 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
USP44-203ENST00000537435 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
USP44-203ENST00000537435 NFE2L2Q16236 605 aa18.11■□□□□ 0.49
USP44-203ENST00000537435 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
USP44-203ENST00000537435 MFAP1P55081 439 aaKnown RBP18.1■□□□□ 0.49
USP44-203ENST00000537435 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
USP44-203ENST00000537435 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
USP44-203ENST00000537435 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
USP44-203ENST00000537435 C22orf23Q9BZE7 217 aa18.09■□□□□ 0.49
USP44-203ENST00000537435 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
USP44-203ENST00000537435 AGLP35573 1532 aa18.09■□□□□ 0.49
USP44-203ENST00000537435 PPIP5K1Q6PFW1 1433 aa18.08■□□□□ 0.49
USP44-203ENST00000537435 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.49
USP44-203ENST00000537435 BRPF1P55201 1214 aaPredicted RBP18.08■□□□□ 0.49
USP44-203ENST00000537435 MLECQ14165 292 aa18.08■□□□□ 0.49
USP44-203ENST00000537435 NME9Q86XW9 330 aa18.08■□□□□ 0.49
USP44-203ENST00000537435 SPATA31D1Q6ZQQ2 1576 aa18.08■□□□□ 0.48
USP44-203ENST00000537435 IL13P35225 146 aa18.08■□□□□ 0.48
USP44-203ENST00000537435 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
USP44-203ENST00000537435 EDC4Q6P2E9 1401 aaKnown RBP18.07■□□□□ 0.48
USP44-203ENST00000537435 RTN4Q9NQC3 1192 aaKnown RBP18.07■□□□□ 0.48
USP44-203ENST00000537435 REREQ9P2R6 1566 aa18.07■□□□□ 0.48
USP44-203ENST00000537435 VAMP4O75379 141 aa18.07■□□□□ 0.48
USP44-203ENST00000537435 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
USP44-203ENST00000537435 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
USP44-203ENST00000537435 NUCB1Q02818 461 aa18.06■□□□□ 0.48
USP44-203ENST00000537435 CALD1Q05682 793 aaKnown RBP18.06■□□□□ 0.48
USP44-203ENST00000537435 RIMBP3CA6NJZ7 1639 aa18.06■□□□□ 0.48
USP44-203ENST00000537435 RIMBP3BA6NNM3 1639 aa18.06■□□□□ 0.48
USP44-203ENST00000537435 RIMBP3Q9UFD9 1639 aa18.06■□□□□ 0.48
USP44-203ENST00000537435 TSPYL6Q8N831 410 aa18.06■□□□□ 0.48
USP44-203ENST00000537435 MRPL50Q8N5N7 158 aaKnown RBP18.05■□□□□ 0.48
USP44-203ENST00000537435 LNPKQ9C0E8 428 aa18.05■□□□□ 0.48
USP44-203ENST00000537435 GNAI1P63096 354 aa18.05■□□□□ 0.48
USP44-203ENST00000537435 IFT57Q9NWB7 429 aa18.05■□□□□ 0.48
USP44-203ENST00000537435 METP08581 1390 aa18.04■□□□□ 0.48
USP44-203ENST00000537435 TXNDC2Q86VQ3 553 aa18.04■□□□□ 0.48
USP44-203ENST00000537435 MAP2P11137 1827 aaKnown RBP18.04■□□□□ 0.48
USP44-203ENST00000537435 DIP2BQ9P265 1576 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms