RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 WASLO00401 505 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-207ENST00000537063 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-207ENST00000537063 RIMS1Q86UR5 1692 aaKnown RBP12.16□□□□□ -0.46
UBE3B-207ENST00000537063 MSH5O43196 834 aa12.16□□□□□ -0.46
UBE3B-207ENST00000537063 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
UBE3B-207ENST00000537063 TCERG1O14776 1098 aaKnown RBP12.16□□□□□ -0.46
UBE3B-207ENST00000537063 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-207ENST00000537063 NALCNQ8IZF0 1738 aa12.15□□□□□ -0.46
UBE3B-207ENST00000537063 MS4A1P11836 297 aa12.15□□□□□ -0.47
UBE3B-207ENST00000537063 AATKQ6ZMQ8 1374 aa12.14□□□□□ -0.47
UBE3B-207ENST00000537063 ROBO2Q9HCK4 1378 aa12.14□□□□□ -0.47
UBE3B-207ENST00000537063 XRN1Q8IZH2 1706 aaKnown RBP12.13□□□□□ -0.47
UBE3B-207ENST00000537063 U2AF1L5P0DN76 240 aaPredicted RBP12.13□□□□□ -0.47
UBE3B-207ENST00000537063 U2AF1Q01081 240 aaKnown RBP eCLIP12.13□□□□□ -0.47
UBE3B-207ENST00000537063 PDE3AQ14432 1141 aa12.13□□□□□ -0.47
UBE3B-207ENST00000537063 BCAR3O75815 825 aa12.12□□□□□ -0.47
UBE3B-207ENST00000537063 ANP32EQ9BTT0 268 aa12.12□□□□□ -0.47
UBE3B-207ENST00000537063 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
UBE3B-207ENST00000537063 PTCH1Q13635 1447 aa12.12□□□□□ -0.47
UBE3B-207ENST00000537063 PTPRUQ92729 1446 aa12.12□□□□□ -0.47
UBE3B-207ENST00000537063 CENPQQ7L2Z9 268 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-207ENST00000537063 TXNDC2Q86VQ3 553 aa12.11□□□□□ -0.47
UBE3B-207ENST00000537063 IL16Q14005 1332 aa12.11□□□□□ -0.47
UBE3B-207ENST00000537063 MYT1Q01538 1121 aa12.11□□□□□ -0.47
UBE3B-207ENST00000537063 RARSP54136 660 aaKnown RBP12.1□□□□□ -0.47
UBE3B-207ENST00000537063 NUDT16Q96DE0 195 aaKnown RBP12.1□□□□□ -0.47
UBE3B-207ENST00000537063 PRR36Q9H6K5 1346 aa12.1□□□□□ -0.47
UBE3B-207ENST00000537063 LTKP29376 864 aa12.1□□□□□ -0.47
UBE3B-207ENST00000537063 POLKQ9UBT6 870 aa12.1□□□□□ -0.47
UBE3B-207ENST00000537063 DIAPH1O60610 1272 aaKnown RBP12.1□□□□□ -0.47
UBE3B-207ENST00000537063 CT47B1P0C2W7 299 aaPredicted RBP12.1□□□□□ -0.47
UBE3B-207ENST00000537063 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
UBE3B-207ENST00000537063 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
UBE3B-207ENST00000537063 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
UBE3B-207ENST00000537063 CCDC61Q9Y6R9 512 aa12.09□□□□□ -0.47
UBE3B-207ENST00000537063 VIRMAQ69YN4 1812 aaKnown RBP12.08□□□□□ -0.47
UBE3B-207ENST00000537063 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-207ENST00000537063 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
UBE3B-207ENST00000537063 USP54Q70EL1 1684 aa12.08□□□□□ -0.48
UBE3B-207ENST00000537063 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
UBE3B-207ENST00000537063 OVOS2A0A0J9YW53 1432 aa12.08□□□□□ -0.48
UBE3B-207ENST00000537063 OVOS2Q6IE36 1432 aa12.08□□□□□ -0.48
UBE3B-207ENST00000537063 FCHSD2O94868 740 aa12.07□□□□□ -0.48
UBE3B-207ENST00000537063 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
UBE3B-207ENST00000537063 SSH2Q76I76 1423 aa12.07□□□□□ -0.48
UBE3B-207ENST00000537063 AAMPQ13685 434 aa12.07□□□□□ -0.48
UBE3B-207ENST00000537063 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
UBE3B-207ENST00000537063 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
UBE3B-207ENST00000537063 CEP170BQ9Y4F5 1589 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-207ENST00000537063 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
UBE3B-207ENST00000537063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBE3B-207ENST00000537063 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
UBE3B-207ENST00000537063 ZNF692Q9BU19 519 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-207ENST00000537063 MAPK8IP3Q9UPT6 1336 aa12.06□□□□□ -0.48
UBE3B-207ENST00000537063 PEAK1Q9H792 1746 aa12.05□□□□□ -0.48
UBE3B-207ENST00000537063 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
UBE3B-207ENST00000537063 NME9Q86XW9 330 aa12.05□□□□□ -0.48
UBE3B-207ENST00000537063 PDE4AP27815 886 aa12.05□□□□□ -0.48
UBE3B-207ENST00000537063 USP6P35125 1406 aa12.05□□□□□ -0.48
UBE3B-207ENST00000537063 FMN2Q9NZ56 1722 aa12.05□□□□□ -0.48
UBE3B-207ENST00000537063 IL13P35225 146 aa12.05□□□□□ -0.48
UBE3B-207ENST00000537063 TBX22Q9Y458 520 aa12.05□□□□□ -0.48
UBE3B-207ENST00000537063 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-207ENST00000537063 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
UBE3B-207ENST00000537063 RGPD8O14715 1765 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-207ENST00000537063 USP31Q70CQ4 1352 aa12.03□□□□□ -0.48
UBE3B-207ENST00000537063 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
UBE3B-207ENST00000537063 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
UBE3B-207ENST00000537063 CLUAP1Q96AJ1 413 aa12.03□□□□□ -0.48
UBE3B-207ENST00000537063 EMILIN1Q9Y6C2 1016 aa12.02□□□□□ -0.48
UBE3B-207ENST00000537063 PIK3R4Q99570 1358 aa12.02□□□□□ -0.48
UBE3B-207ENST00000537063 PANK1Q8TE04 598 aa12.02□□□□□ -0.49
UBE3B-207ENST00000537063 COG3Q96JB2 828 aa12.02□□□□□ -0.49
UBE3B-207ENST00000537063 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
UBE3B-207ENST00000537063 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.49
UBE3B-207ENST00000537063 RIPK4P57078 832 aa12.01□□□□□ -0.49
UBE3B-207ENST00000537063 PIK3C2AO00443 1686 aa12.01□□□□□ -0.49
UBE3B-207ENST00000537063 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
UBE3B-207ENST00000537063 ANKARQ7Z5J8 1434 aa12.01□□□□□ -0.49
UBE3B-207ENST00000537063 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
UBE3B-207ENST00000537063 RLBP1P12271 317 aa12.01□□□□□ -0.49
UBE3B-207ENST00000537063 FBLN1P23142 703 aa12□□□□□ -0.49
UBE3B-207ENST00000537063 PRKAR2BP31323 418 aa12□□□□□ -0.49
UBE3B-207ENST00000537063 TSR2Q969E8 191 aaKnown RBP12□□□□□ -0.49
UBE3B-207ENST00000537063 IPO9Q96P70 1041 aaKnown RBP12□□□□□ -0.49
UBE3B-207ENST00000537063 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
UBE3B-207ENST00000537063 NFE2L2Q16236 605 aa12□□□□□ -0.49
UBE3B-207ENST00000537063 SKAP1Q86WV1 359 aa12□□□□□ -0.49
UBE3B-207ENST00000537063 ACEP12821 1306 aa12□□□□□ -0.49
UBE3B-207ENST00000537063 THEMISQ8N1K5 641 aaPredicted RBP12□□□□□ -0.49
UBE3B-207ENST00000537063 COG6Q9Y2V7 657 aa12□□□□□ -0.49
UBE3B-207ENST00000537063 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
UBE3B-207ENST00000537063 EXOSC9Q06265 439 aaKnown RBP11.99□□□□□ -0.49
UBE3B-207ENST00000537063 IGHDP01880 384 aa11.99□□□□□ -0.49
UBE3B-207ENST00000537063 AMOTL2Q9Y2J4 779 aa11.99□□□□□ -0.49
UBE3B-207ENST00000537063 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-207ENST00000537063 SLC26A8Q96RN1 970 aa11.98□□□□□ -0.49
UBE3B-207ENST00000537063 TNNQ9UQP3 1299 aa11.98□□□□□ -0.49
UBE3B-207ENST00000537063 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-207ENST00000537063 TTC21AQ8NDW8 1320 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms