RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CABLES1Q8TDN4 633 aa31.21■■■□□ 2.59
VPS37C-202ENST00000535818 MARF1Q9Y4F3 1742 aaKnown RBP31.21■■■□□ 2.59
VPS37C-202ENST00000535818 ABCA3Q99758 1704 aa31.2■■■□□ 2.58
VPS37C-202ENST00000535818 POTEAQ6S8J7 498 aa31.19■■■□□ 2.58
VPS37C-202ENST00000535818 USP6P35125 1406 aa31.17■■■□□ 2.58
VPS37C-202ENST00000535818 TMC1Q8TDI8 760 aa31.16■■■□□ 2.58
VPS37C-202ENST00000535818 BRD4O60885 1362 aaPredicted RBP31.16■■■□□ 2.58
VPS37C-202ENST00000535818 TMF1P82094 1093 aa31.15■■■□□ 2.58
VPS37C-202ENST00000535818 PUS7Q96PZ0 661 aaKnown RBP31.14■■■□□ 2.58
VPS37C-202ENST00000535818 AKAP12Q02952 1782 aa31.13■■■□□ 2.57
VPS37C-202ENST00000535818 NUTM2GQ5VZR2 741 aa31.13■■■□□ 2.57
VPS37C-202ENST00000535818 ABTB2Q8N961 1025 aa31.13■■■□□ 2.57
VPS37C-202ENST00000535818 ZNF692Q9BU19 519 aaPredicted RBP31.13■■■□□ 2.57
VPS37C-202ENST00000535818 USP21Q9UK80 565 aa31.11■■■□□ 2.57
VPS37C-202ENST00000535818 CRYBG1Q9Y4K1 1723 aa31.1■■■□□ 2.57
VPS37C-202ENST00000535818 KTN1Q86UP2 1357 aaKnown RBP31.09■■■□□ 2.57
VPS37C-202ENST00000535818 CPSF1Q10570 1443 aaKnown RBP31.08■■■□□ 2.57
VPS37C-202ENST00000535818 FNBP4Q8N3X1 1017 aaPredicted RBP31.08■■■□□ 2.57
VPS37C-202ENST00000535818 PHRF1Q9P1Y6 1649 aaKnown RBP31.07■■■□□ 2.56
VPS37C-202ENST00000535818 EIF4G2P78344 907 aaKnown RBP eCLIP31.07■■■□□ 2.56
VPS37C-202ENST00000535818 HDGFL2Q7Z4V5 671 aaPredicted RBP31.07■■■□□ 2.56
VPS37C-202ENST00000535818 SLC12A5Q9H2X9 1139 aa31.06■■■□□ 2.56
VPS37C-202ENST00000535818 NINLQ9Y2I6 1382 aa31.05■■■□□ 2.56
VPS37C-202ENST00000535818 MON2Q7Z3U7 1717 aa31.05■■■□□ 2.56
VPS37C-202ENST00000535818 CDCA8Q53HL2 280 aa31.05■■■□□ 2.56
VPS37C-202ENST00000535818 NLRP13Q86W25 1043 aa31.05■■■□□ 2.56
VPS37C-202ENST00000535818 QTRT2Q9H974 415 aaKnown RBP31.05■■■□□ 2.56
VPS37C-202ENST00000535818 SSH2Q76I76 1423 aa31.05■■■□□ 2.56
VPS37C-202ENST00000535818 TERF2IPQ9NYB0 399 aa31.04■■■□□ 2.56
VPS37C-202ENST00000535818 NRKQ7Z2Y5 1582 aa31.04■■■□□ 2.56
VPS37C-202ENST00000535818 TTC21BQ7Z4L5 1316 aa31.03■■■□□ 2.56
VPS37C-202ENST00000535818 CD163L1Q9NR16 1453 aa31.02■■■□□ 2.56
VPS37C-202ENST00000535818 RXRBP28702 533 aa31.02■■■□□ 2.56
VPS37C-202ENST00000535818 TTC21AQ8NDW8 1320 aa31.01■■■□□ 2.56
VPS37C-202ENST00000535818 PLCH1Q4KWH8 1693 aa31.01■■■□□ 2.55
VPS37C-202ENST00000535818 HSPA5P11021 654 aaKnown RBP31.01■■■□□ 2.55
VPS37C-202ENST00000535818 NLRP6P59044 892 aa31.01■■■□□ 2.55
VPS37C-202ENST00000535818 TRPC5Q9UL62 973 aaPredicted RBP31.01■■■□□ 2.55
VPS37C-202ENST00000535818 SLIT2O94813 1529 aa31.01■■■□□ 2.55
VPS37C-202ENST00000535818 PIK3C2AO00443 1686 aa31■■■□□ 2.55
VPS37C-202ENST00000535818 BCL9LQ86UU0 1499 aa31■■■□□ 2.55
VPS37C-202ENST00000535818 USP19O94966 1318 aa30.99■■■□□ 2.55
VPS37C-202ENST00000535818 A0A1W2PP64 1363 aa30.99■■■□□ 2.55
VPS37C-202ENST00000535818 COL14A1Q05707 1796 aaKnown RBP30.98■■■□□ 2.55
VPS37C-202ENST00000535818 PRDM11Q9NQV5 511 aa30.98■■■□□ 2.55
VPS37C-202ENST00000535818 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.98■■■□□ 2.55
VPS37C-202ENST00000535818 FAM83GA6ND36 823 aa30.97■■■□□ 2.55
VPS37C-202ENST00000535818 UNC5CLQ8IV45 518 aa30.97■■■□□ 2.55
VPS37C-202ENST00000535818 NWD2Q9ULI1 1742 aa30.97■■■□□ 2.55
VPS37C-202ENST00000535818 ATRNO75882 1429 aa30.97■■■□□ 2.55
VPS37C-202ENST00000535818 RBM6P78332 1123 aaKnown RBP30.96■■■□□ 2.55
VPS37C-202ENST00000535818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.96■■■□□ 2.55
VPS37C-202ENST00000535818 KIAA0232Q92628 1395 aa30.95■■■□□ 2.55
VPS37C-202ENST00000535818 ZC3H6P61129 1189 aaKnown RBP30.95■■■□□ 2.55
VPS37C-202ENST00000535818 EDC4Q6P2E9 1401 aaKnown RBP30.95■■■□□ 2.54
VPS37C-202ENST00000535818 SOCS7O14512 581 aa30.93■■■□□ 2.54
VPS37C-202ENST00000535818 GCP02774 474 aa30.92■■■□□ 2.54
VPS37C-202ENST00000535818 ANKRD36BQ8N2N9 1353 aa30.92■■■□□ 2.54
VPS37C-202ENST00000535818 POLR3GLQ9BT43 218 aa30.91■■■□□ 2.54
VPS37C-202ENST00000535818 BTG4Q9NY30 223 aa30.91■■■□□ 2.54
VPS37C-202ENST00000535818 SLIT3O75094 1523 aa30.91■■■□□ 2.54
VPS37C-202ENST00000535818 CHRNA2Q15822 529 aa30.9■■■□□ 2.54
VPS37C-202ENST00000535818 CDK12Q9NYV4 1490 aaPredicted RBP30.89■■■□□ 2.54
VPS37C-202ENST00000535818 NME9Q86XW9 330 aa30.88■■■□□ 2.53
VPS37C-202ENST00000535818 CCDC9Q9Y3X0 531 aaKnown RBP30.88■■■□□ 2.53
VPS37C-202ENST00000535818 NRAPQ86VF7 1730 aa30.87■■■□□ 2.53
VPS37C-202ENST00000535818 ZBTB7CA1YPR0 619 aa30.87■■■□□ 2.53
VPS37C-202ENST00000535818 CPDO75976 1380 aa30.87■■■□□ 2.53
VPS37C-202ENST00000535818 MYOM1P52179 1685 aa30.87■■■□□ 2.53
VPS37C-202ENST00000535818 GJD4Q96KN9 370 aaPredicted RBP30.86■■■□□ 2.53
VPS37C-202ENST00000535818 SOX12O15370 315 aa30.85■■■□□ 2.53
VPS37C-202ENST00000535818 VPS72Q15906 364 aa30.85■■■□□ 2.53
VPS37C-202ENST00000535818 KCNH5Q8NCM2 988 aa30.85■■■□□ 2.53
VPS37C-202ENST00000535818 RGS12O14924 1447 aa30.84■■■□□ 2.53
VPS37C-202ENST00000535818 ZRANB1Q9UGI0 708 aa30.84■■■□□ 2.53
VPS37C-202ENST00000535818 USP31Q70CQ4 1352 aa30.83■■■□□ 2.53
VPS37C-202ENST00000535818 USP54Q70EL1 1684 aa30.82■■■□□ 2.52
VPS37C-202ENST00000535818 GLI3P10071 1580 aa30.8■■■□□ 2.52
VPS37C-202ENST00000535818 STRN4Q9NRL3 753 aa30.79■■■□□ 2.52
VPS37C-202ENST00000535818 LMO7Q8WWI1 1683 aa30.78■■■□□ 2.52
VPS37C-202ENST00000535818 EVA1CP58658 441 aa30.77■■■□□ 2.52
VPS37C-202ENST00000535818 NFAT5O94916 1531 aa30.76■■■□□ 2.51
VPS37C-202ENST00000535818 CAMTA1Q9Y6Y1 1673 aa30.75■■■□□ 2.51
VPS37C-202ENST00000535818 OVOS2A0A0J9YW53 1432 aa30.75■■■□□ 2.51
VPS37C-202ENST00000535818 OVOS2Q6IE36 1432 aa30.75■■■□□ 2.51
VPS37C-202ENST00000535818 COG3Q96JB2 828 aa30.74■■■□□ 2.51
VPS37C-202ENST00000535818 AATKQ6ZMQ8 1374 aa30.74■■■□□ 2.51
VPS37C-202ENST00000535818 NSD3Q9BZ95 1437 aa30.73■■■□□ 2.51
VPS37C-202ENST00000535818 ARHGEF25Q86VW2 580 aa30.72■■■□□ 2.51
VPS37C-202ENST00000535818 SPATA31A5Q5VU36 1347 aa30.71■■■□□ 2.51
VPS37C-202ENST00000535818 SPATA31A7Q8IWB4 1347 aa30.71■■■□□ 2.51
VPS37C-202ENST00000535818 KIF20BQ96Q89 1820 aa30.7■■■□□ 2.51
VPS37C-202ENST00000535818 C11orf95C9JLR9 678 aaPredicted RBP30.7■■■□□ 2.51
VPS37C-202ENST00000535818 COL5A2P05997 1499 aaPredicted RBP30.7■■■□□ 2.5
VPS37C-202ENST00000535818 A0A0G2JS52 829 aa30.69■■■□□ 2.5
VPS37C-202ENST00000535818 MYT1Q01538 1121 aa30.69■■■□□ 2.5
VPS37C-202ENST00000535818 CARD14Q9BXL6 1004 aa30.68■■■□□ 2.5
VPS37C-202ENST00000535818 GGNBP2Q9H3C7 697 aa30.68■■■□□ 2.5
VPS37C-202ENST00000535818 COL18A1P39060 1754 aa30.68■■■□□ 2.5
VPS37C-202ENST00000535818 FYB1O15117 783 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms