RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
CD4-204ENST00000535707 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.45
CD4-204ENST00000535707 PLEKHG3A1L390 1219 aa12.26□□□□□ -0.45
CD4-204ENST00000535707 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
CD4-204ENST00000535707 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
CD4-204ENST00000535707 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
CD4-204ENST00000535707 BRD4O60885 1362 aaPredicted RBP12.26□□□□□ -0.45
CD4-204ENST00000535707 KIF7Q2M1P5 1343 aa12.25□□□□□ -0.45
CD4-204ENST00000535707 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
CD4-204ENST00000535707 CCDC7Q96M83 1385 aa12.25□□□□□ -0.45
CD4-204ENST00000535707 MYOM1P52179 1685 aa12.24□□□□□ -0.45
CD4-204ENST00000535707 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
CD4-204ENST00000535707 PRR36Q9H6K5 1346 aa12.24□□□□□ -0.45
CD4-204ENST00000535707 CABP2Q9NPB3 220 aa12.24□□□□□ -0.45
CD4-204ENST00000535707 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
CD4-204ENST00000535707 ZNF316A6NFI3 1004 aaPredicted RBP12.23□□□□□ -0.45
CD4-204ENST00000535707 ARXQ96QS3 562 aa12.23□□□□□ -0.45
CD4-204ENST00000535707 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
CD4-204ENST00000535707 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
CD4-204ENST00000535707 CPSF1Q10570 1443 aaKnown RBP12.22□□□□□ -0.45
CD4-204ENST00000535707 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
CD4-204ENST00000535707 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
CD4-204ENST00000535707 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
CD4-204ENST00000535707 AKAP12Q02952 1782 aa12.22□□□□□ -0.45
CD4-204ENST00000535707 NHSL1Q5SYE7 1610 aa12.22□□□□□ -0.45
CD4-204ENST00000535707 ANKRD36BQ8N2N9 1353 aa12.21□□□□□ -0.45
CD4-204ENST00000535707 TERF2IPQ9NYB0 399 aa12.21□□□□□ -0.45
CD4-204ENST00000535707 AHDC1Q5TGY3 1603 aaPredicted RBP12.21□□□□□ -0.46
CD4-204ENST00000535707 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
CD4-204ENST00000535707 ROBO1Q9Y6N7 1651 aa12.2□□□□□ -0.46
CD4-204ENST00000535707 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
CD4-204ENST00000535707 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
CD4-204ENST00000535707 BRINP3Q76B58 766 aa12.2□□□□□ -0.46
CD4-204ENST00000535707 CD163L1Q9NR16 1453 aa12.2□□□□□ -0.46
CD4-204ENST00000535707 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
CD4-204ENST00000535707 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
CD4-204ENST00000535707 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
CD4-204ENST00000535707 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
CD4-204ENST00000535707 CABP1Q9NZU7 370 aa12.19□□□□□ -0.46
CD4-204ENST00000535707 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
CD4-204ENST00000535707 ACEP12821 1306 aa12.18□□□□□ -0.46
CD4-204ENST00000535707 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
CD4-204ENST00000535707 ORAI2Q96SN7 254 aa12.18□□□□□ -0.46
CD4-204ENST00000535707 SSH2Q76I76 1423 aa12.18□□□□□ -0.46
CD4-204ENST00000535707 NRKQ7Z2Y5 1582 aa12.18□□□□□ -0.46
CD4-204ENST00000535707 SLC12A5Q9H2X9 1139 aa12.17□□□□□ -0.46
CD4-204ENST00000535707 USP6P35125 1406 aa12.17□□□□□ -0.46
CD4-204ENST00000535707 EDC4Q6P2E9 1401 aaKnown RBP12.17□□□□□ -0.46
CD4-204ENST00000535707 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
CD4-204ENST00000535707 SBNO1A3KN83 1393 aa12.17□□□□□ -0.46
CD4-204ENST00000535707 SOS2Q07890 1332 aaPredicted RBP12.16□□□□□ -0.46
CD4-204ENST00000535707 PXDNQ92626 1479 aa12.16□□□□□ -0.46
CD4-204ENST00000535707 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
CD4-204ENST00000535707 PSME1Q06323 249 aa12.16□□□□□ -0.46
CD4-204ENST00000535707 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
CD4-204ENST00000535707 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
CD4-204ENST00000535707 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
CD4-204ENST00000535707 KTN1Q86UP2 1357 aaKnown RBP12.16□□□□□ -0.46
CD4-204ENST00000535707 TTC21AQ8NDW8 1320 aa12.15□□□□□ -0.46
CD4-204ENST00000535707 TRPM3Q9HCF6 1732 aaPredicted RBP12.15□□□□□ -0.46
CD4-204ENST00000535707 TMEM132AQ24JP5 1023 aa12.15□□□□□ -0.46
CD4-204ENST00000535707 NPC1L1Q9UHC9 1359 aa12.15□□□□□ -0.46
CD4-204ENST00000535707 USP54Q70EL1 1684 aa12.14□□□□□ -0.47
CD4-204ENST00000535707 PMFBP1Q8TBY8 1022 aa12.14□□□□□ -0.47
CD4-204ENST00000535707 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
CD4-204ENST00000535707 NSD2O96028 1365 aa12.14□□□□□ -0.47
CD4-204ENST00000535707 COL16A1Q07092 1604 aaPredicted RBP12.13□□□□□ -0.47
CD4-204ENST00000535707 FOXO3O43524 673 aa12.13□□□□□ -0.47
CD4-204ENST00000535707 PANK3Q9H999 370 aa12.13□□□□□ -0.47
CD4-204ENST00000535707 PHLPP1O60346 1717 aa12.13□□□□□ -0.47
CD4-204ENST00000535707 ALS2Q96Q42 1657 aa12.13□□□□□ -0.47
CD4-204ENST00000535707 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
CD4-204ENST00000535707 KRT28Q7Z3Y7 464 aa12.12□□□□□ -0.47
CD4-204ENST00000535707 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
CD4-204ENST00000535707 POLR3GLQ9BT43 218 aa12.12□□□□□ -0.47
CD4-204ENST00000535707 ARHGEF10O15013 1369 aa12.12□□□□□ -0.47
CD4-204ENST00000535707 TNS3Q68CZ2 1445 aa12.11□□□□□ -0.47
CD4-204ENST00000535707 MED1Q15648 1581 aaPredicted RBP12.11□□□□□ -0.47
CD4-204ENST00000535707 USP31Q70CQ4 1352 aa12.11□□□□□ -0.47
CD4-204ENST00000535707 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
CD4-204ENST00000535707 LRRC59Q96AG4 307 aaKnown RBP12.11□□□□□ -0.47
CD4-204ENST00000535707 COL22A1Q8NFW1 1626 aaPredicted RBP12.11□□□□□ -0.47
CD4-204ENST00000535707 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
CD4-204ENST00000535707 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
CD4-204ENST00000535707 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
CD4-204ENST00000535707 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
CD4-204ENST00000535707 CARD14Q9BXL6 1004 aa12.1□□□□□ -0.47
CD4-204ENST00000535707 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
CD4-204ENST00000535707 KIF20BQ96Q89 1820 aa12.09□□□□□ -0.47
CD4-204ENST00000535707 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
CD4-204ENST00000535707 PIP4K2BP78356 416 aa12.09□□□□□ -0.47
CD4-204ENST00000535707 KNSTRNQ9Y448 316 aa12.09□□□□□ -0.47
CD4-204ENST00000535707 PIK3C2AO00443 1686 aa12.09□□□□□ -0.47
CD4-204ENST00000535707 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
CD4-204ENST00000535707 GTPBP6O43824 516 aaPredicted RBP12.08□□□□□ -0.48
CD4-204ENST00000535707 OVOS2A0A0J9YW53 1432 aa12.07□□□□□ -0.48
CD4-204ENST00000535707 GSE1Q14687 1217 aa12.07□□□□□ -0.48
CD4-204ENST00000535707 OVOS2Q6IE36 1432 aa12.07□□□□□ -0.48
CD4-204ENST00000535707 FYB1O15117 783 aa12.06□□□□□ -0.48
CD4-204ENST00000535707 DDX10Q13206 875 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms