RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CAPN15O75808 1086 aa15.59■□□□□ 0.09
CCDC60-202ENST00000535685 NBPF1Q3BBV0 1214 aa15.59■□□□□ 0.09
CCDC60-202ENST00000535685 PMFBP1Q8TBY8 1022 aa15.59■□□□□ 0.09
CCDC60-202ENST00000535685 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.09
CCDC60-202ENST00000535685 L3MBTL2Q969R5 705 aa15.59■□□□□ 0.09
CCDC60-202ENST00000535685 NWD2Q9ULI1 1742 aa15.59■□□□□ 0.09
CCDC60-202ENST00000535685 GPRASP1Q5JY77 1395 aa15.59■□□□□ 0.09
CCDC60-202ENST00000535685 TOPAZ1Q8N9V7 1692 aa15.57■□□□□ 0.08
CCDC60-202ENST00000535685 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
CCDC60-202ENST00000535685 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
CCDC60-202ENST00000535685 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
CCDC60-202ENST00000535685 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
CCDC60-202ENST00000535685 CDK19Q9BWU1 502 aa15.56■□□□□ 0.08
CCDC60-202ENST00000535685 TRPM1Q7Z4N2 1603 aa15.56■□□□□ 0.08
CCDC60-202ENST00000535685 CRYBG1Q9Y4K1 1723 aa15.55■□□□□ 0.08
CCDC60-202ENST00000535685 POLR3AO14802 1390 aaPredicted RBP15.55■□□□□ 0.08
CCDC60-202ENST00000535685 POTEDQ86YR6 584 aa15.55■□□□□ 0.08
CCDC60-202ENST00000535685 SIN3AQ96ST3 1273 aa15.55■□□□□ 0.08
CCDC60-202ENST00000535685 CCDC61Q9Y6R9 512 aa15.55■□□□□ 0.08
CCDC60-202ENST00000535685 CENPJQ9HC77 1338 aaPredicted RBP15.54■□□□□ 0.08
CCDC60-202ENST00000535685 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
CCDC60-202ENST00000535685 POLA2Q14181 598 aa15.54■□□□□ 0.08
CCDC60-202ENST00000535685 GJD4Q96KN9 370 aaPredicted RBP15.54■□□□□ 0.08
CCDC60-202ENST00000535685 PLCH1Q4KWH8 1693 aa15.54■□□□□ 0.08
CCDC60-202ENST00000535685 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
CCDC60-202ENST00000535685 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
CCDC60-202ENST00000535685 QRICH2Q9H0J4 1663 aa15.53■□□□□ 0.08
CCDC60-202ENST00000535685 CABLES1Q8TDN4 633 aa15.52■□□□□ 0.08
CCDC60-202ENST00000535685 GLI3P10071 1580 aa15.51■□□□□ 0.07
CCDC60-202ENST00000535685 HAP1P54257 671 aaPredicted RBP15.51■□□□□ 0.07
CCDC60-202ENST00000535685 COL14A1Q05707 1796 aaKnown RBP15.5■□□□□ 0.07
CCDC60-202ENST00000535685 VPS72Q15906 364 aa15.5■□□□□ 0.07
CCDC60-202ENST00000535685 LMOD2Q6P5Q4 547 aa15.5■□□□□ 0.07
CCDC60-202ENST00000535685 RALGAPBQ86X10 1494 aa15.5■□□□□ 0.07
CCDC60-202ENST00000535685 BRD4O60885 1362 aaPredicted RBP15.49■□□□□ 0.07
CCDC60-202ENST00000535685 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
CCDC60-202ENST00000535685 NRAPQ86VF7 1730 aa15.49■□□□□ 0.07
CCDC60-202ENST00000535685 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
CCDC60-202ENST00000535685 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
CCDC60-202ENST00000535685 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
CCDC60-202ENST00000535685 ACEP12821 1306 aa15.48■□□□□ 0.07
CCDC60-202ENST00000535685 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
CCDC60-202ENST00000535685 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
CCDC60-202ENST00000535685 EP400Q96L91 3159 aa15.47■□□□□ 0.07
CCDC60-202ENST00000535685 BRWD3Q6RI45 1802 aa15.47■□□□□ 0.07
CCDC60-202ENST00000535685 ROCK2O75116 1388 aaKnown RBP15.46■□□□□ 0.07
CCDC60-202ENST00000535685 PHRF1Q9P1Y6 1649 aaKnown RBP15.46■□□□□ 0.06
CCDC60-202ENST00000535685 PAK3O75914 559 aaPredicted RBP15.45■□□□□ 0.06
CCDC60-202ENST00000535685 PPIP5K1Q6PFW1 1433 aa15.44■□□□□ 0.06
CCDC60-202ENST00000535685 SRPK2P78362 688 aaKnown RBP15.44■□□□□ 0.06
CCDC60-202ENST00000535685 CCDC125Q86Z20 511 aa15.44■□□□□ 0.06
CCDC60-202ENST00000535685 SBNO2Q9Y2G9 1366 aa15.44■□□□□ 0.06
CCDC60-202ENST00000535685 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
CCDC60-202ENST00000535685 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
CCDC60-202ENST00000535685 BTG4Q9NY30 223 aa15.42■□□□□ 0.06
CCDC60-202ENST00000535685 USP19O94966 1318 aa15.42■□□□□ 0.06
CCDC60-202ENST00000535685 CPDO75976 1380 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 AKAP12Q02952 1782 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 SEPT12Q8IYM1 358 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 CABP1Q9NZU7 370 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 USP6P35125 1406 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 SSH2Q76I76 1423 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 NRKQ7Z2Y5 1582 aa15.4■□□□□ 0.06
CCDC60-202ENST00000535685 KIAA0232Q92628 1395 aa15.39■□□□□ 0.05
CCDC60-202ENST00000535685 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
CCDC60-202ENST00000535685 PLEKHG5O94827 1062 aa15.39■□□□□ 0.05
CCDC60-202ENST00000535685 NLRP13Q86W25 1043 aa15.39■□□□□ 0.05
CCDC60-202ENST00000535685 ABTB2Q8N961 1025 aa15.39■□□□□ 0.05
CCDC60-202ENST00000535685 SPATA31A5Q5VU36 1347 aa15.39■□□□□ 0.05
CCDC60-202ENST00000535685 SPATA31A7Q8IWB4 1347 aa15.39■□□□□ 0.05
CCDC60-202ENST00000535685 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
CCDC60-202ENST00000535685 CCDC9Q9Y3X0 531 aaKnown RBP15.37■□□□□ 0.05
CCDC60-202ENST00000535685 LMO7Q8WWI1 1683 aa15.37■□□□□ 0.05
CCDC60-202ENST00000535685 THSD7AQ9UPZ6 1657 aa15.36■□□□□ 0.05
CCDC60-202ENST00000535685 PUS7Q96PZ0 661 aaKnown RBP15.36■□□□□ 0.05
CCDC60-202ENST00000535685 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
CCDC60-202ENST00000535685 BLMP54132 1417 aaPredicted RBP15.35■□□□□ 0.05
CCDC60-202ENST00000535685 CPSF1Q10570 1443 aaKnown RBP15.35■□□□□ 0.05
CCDC60-202ENST00000535685 SLIT3O75094 1523 aa15.35■□□□□ 0.05
CCDC60-202ENST00000535685 ABCB7O75027 752 aa15.35■□□□□ 0.05
CCDC60-202ENST00000535685 GCP02774 474 aa15.35■□□□□ 0.05
CCDC60-202ENST00000535685 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
CCDC60-202ENST00000535685 KRT27Q7Z3Y8 459 aa15.35■□□□□ 0.05
CCDC60-202ENST00000535685 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
CCDC60-202ENST00000535685 ZC3H6P61129 1189 aaKnown RBP15.34■□□□□ 0.05
CCDC60-202ENST00000535685 PROM2Q8N271 834 aa15.34■□□□□ 0.05
CCDC60-202ENST00000535685 SPATA31A1Q5TZJ5 1347 aa15.34■□□□□ 0.05
CCDC60-202ENST00000535685 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
CCDC60-202ENST00000535685 CAMTA1Q9Y6Y1 1673 aa15.34■□□□□ 0.05
CCDC60-202ENST00000535685 MON2Q7Z3U7 1717 aa15.34■□□□□ 0.05
CCDC60-202ENST00000535685 CHRNA2Q15822 529 aa15.33■□□□□ 0.04
CCDC60-202ENST00000535685 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
CCDC60-202ENST00000535685 TTC21AQ8NDW8 1320 aa15.32■□□□□ 0.04
CCDC60-202ENST00000535685 COL18A1P39060 1754 aa15.31■□□□□ 0.04
CCDC60-202ENST00000535685 SLC24A1O60721 1099 aa15.31■□□□□ 0.04
CCDC60-202ENST00000535685 NLRP6P59044 892 aa15.31■□□□□ 0.04
CCDC60-202ENST00000535685 BARGINQ6ZT62 677 aa15.31■□□□□ 0.04
CCDC60-202ENST00000535685 TTC21BQ7Z4L5 1316 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms