RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 WASHC2AQ641Q2 1341 aa20.25■□□□□ 0.83
MSRB3-206ENST00000535664 CCDC7Q96M83 1385 aa20.24■□□□□ 0.83
MSRB3-206ENST00000535664 ACEP12821 1306 aa20.23■□□□□ 0.83
MSRB3-206ENST00000535664 PAK3O75914 559 aaPredicted RBP20.22■□□□□ 0.83
MSRB3-206ENST00000535664 QTRT2Q9H974 415 aaKnown RBP20.22■□□□□ 0.83
MSRB3-206ENST00000535664 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
MSRB3-206ENST00000535664 USP21Q9UK80 565 aa20.22■□□□□ 0.83
MSRB3-206ENST00000535664 TRPC5Q9UL62 973 aaPredicted RBP20.22■□□□□ 0.83
MSRB3-206ENST00000535664 KIF7Q2M1P5 1343 aa20.22■□□□□ 0.83
MSRB3-206ENST00000535664 RBM6P78332 1123 aaKnown RBP20.21■□□□□ 0.83
MSRB3-206ENST00000535664 PUS7Q96PZ0 661 aaKnown RBP20.21■□□□□ 0.83
MSRB3-206ENST00000535664 ZNF692Q9BU19 519 aaPredicted RBP20.21■□□□□ 0.83
MSRB3-206ENST00000535664 ATAD2Q6PL18 1390 aa20.21■□□□□ 0.83
MSRB3-206ENST00000535664 PPIP5K1Q6PFW1 1433 aa20.2■□□□□ 0.82
MSRB3-206ENST00000535664 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
MSRB3-206ENST00000535664 TOPAZ1Q8N9V7 1692 aa20.17■□□□□ 0.82
MSRB3-206ENST00000535664 TRPM3Q9HCF6 1732 aaPredicted RBP20.17■□□□□ 0.82
MSRB3-206ENST00000535664 CABP1Q9NZU7 370 aa20.17■□□□□ 0.82
MSRB3-206ENST00000535664 TMF1P82094 1093 aa20.16■□□□□ 0.82
MSRB3-206ENST00000535664 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
MSRB3-206ENST00000535664 ALS2Q96Q42 1657 aa20.14■□□□□ 0.81
MSRB3-206ENST00000535664 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
MSRB3-206ENST00000535664 UNC5CLQ8IV45 518 aa20.14■□□□□ 0.81
MSRB3-206ENST00000535664 ABTB2Q8N961 1025 aa20.14■□□□□ 0.81
MSRB3-206ENST00000535664 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
MSRB3-206ENST00000535664 MYOM1P52179 1685 aa20.13■□□□□ 0.81
MSRB3-206ENST00000535664 SLIT2O94813 1529 aa20.12■□□□□ 0.81
MSRB3-206ENST00000535664 BCL9LQ86UU0 1499 aa20.11■□□□□ 0.81
MSRB3-206ENST00000535664 ATRNO75882 1429 aa20.1■□□□□ 0.81
MSRB3-206ENST00000535664 USP6P35125 1406 aa20.1■□□□□ 0.81
MSRB3-206ENST00000535664 CDCA8Q53HL2 280 aa20.09■□□□□ 0.81
MSRB3-206ENST00000535664 GJD4Q96KN9 370 aaPredicted RBP20.09■□□□□ 0.81
MSRB3-206ENST00000535664 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.81
MSRB3-206ENST00000535664 FAM83GA6ND36 823 aa20.08■□□□□ 0.81
MSRB3-206ENST00000535664 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
MSRB3-206ENST00000535664 TTC21AQ8NDW8 1320 aa20.07■□□□□ 0.8
MSRB3-206ENST00000535664 PLEKHG5O94827 1062 aa20.07■□□□□ 0.8
MSRB3-206ENST00000535664 HDGFL2Q7Z4V5 671 aaPredicted RBP20.07■□□□□ 0.8
MSRB3-206ENST00000535664 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
MSRB3-206ENST00000535664 VPS72Q15906 364 aa20.06■□□□□ 0.8
MSRB3-206ENST00000535664 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.06■□□□□ 0.8
MSRB3-206ENST00000535664 PRDM11Q9NQV5 511 aa20.06■□□□□ 0.8
MSRB3-206ENST00000535664 CPSF1Q10570 1443 aaKnown RBP20.05■□□□□ 0.8
MSRB3-206ENST00000535664 DIEXFQ68CQ4 756 aaKnown RBP20.05■□□□□ 0.8
MSRB3-206ENST00000535664 ABCA3Q99758 1704 aa20.05■□□□□ 0.8
MSRB3-206ENST00000535664 NWD2Q9ULI1 1742 aa20.05■□□□□ 0.8
MSRB3-206ENST00000535664 USP19O94966 1318 aa20.04■□□□□ 0.8
MSRB3-206ENST00000535664 SSH2Q76I76 1423 aa20.04■□□□□ 0.8
MSRB3-206ENST00000535664 NLRP6P59044 892 aa20.04■□□□□ 0.8
MSRB3-206ENST00000535664 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
MSRB3-206ENST00000535664 KTN1Q86UP2 1357 aaKnown RBP20.04■□□□□ 0.8
MSRB3-206ENST00000535664 GCP02774 474 aa20.03■□□□□ 0.8
MSRB3-206ENST00000535664 BTG4Q9NY30 223 aa20.03■□□□□ 0.8
MSRB3-206ENST00000535664 COL14A1Q05707 1796 aaKnown RBP20.03■□□□□ 0.8
MSRB3-206ENST00000535664 TTC21BQ7Z4L5 1316 aa20.02■□□□□ 0.8
MSRB3-206ENST00000535664 NUTM2GQ5VZR2 741 aa20.02■□□□□ 0.8
MSRB3-206ENST00000535664 KCNH5Q8NCM2 988 aa20.02■□□□□ 0.8
MSRB3-206ENST00000535664 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
MSRB3-206ENST00000535664 CPDO75976 1380 aa20.02■□□□□ 0.8
MSRB3-206ENST00000535664 CCDC9Q9Y3X0 531 aaKnown RBP20.01■□□□□ 0.79
MSRB3-206ENST00000535664 KIAA0232Q92628 1395 aa20■□□□□ 0.79
MSRB3-206ENST00000535664 ONECUT3O60422 494 aaPredicted RBP19.99■□□□□ 0.79
MSRB3-206ENST00000535664 ZC3H6P61129 1189 aaKnown RBP19.99■□□□□ 0.79
MSRB3-206ENST00000535664 RGS12O14924 1447 aa19.99■□□□□ 0.79
MSRB3-206ENST00000535664 CRYBG1Q9Y4K1 1723 aa19.99■□□□□ 0.79
MSRB3-206ENST00000535664 SLC12A5Q9H2X9 1139 aa19.98■□□□□ 0.79
MSRB3-206ENST00000535664 EVA1CP58658 441 aa19.97■□□□□ 0.79
MSRB3-206ENST00000535664 AKAP12Q02952 1782 aa19.97■□□□□ 0.79
MSRB3-206ENST00000535664 PLCH1Q4KWH8 1693 aa19.97■□□□□ 0.79
MSRB3-206ENST00000535664 PHRF1Q9P1Y6 1649 aaKnown RBP19.96■□□□□ 0.79
MSRB3-206ENST00000535664 EDC4Q6P2E9 1401 aaKnown RBP19.95■□□□□ 0.78
MSRB3-206ENST00000535664 CD163L1Q9NR16 1453 aa19.94■□□□□ 0.78
MSRB3-206ENST00000535664 CCDC125Q86Z20 511 aa19.94■□□□□ 0.78
MSRB3-206ENST00000535664 USP31Q70CQ4 1352 aa19.94■□□□□ 0.78
MSRB3-206ENST00000535664 SLIT3O75094 1523 aa19.93■□□□□ 0.78
MSRB3-206ENST00000535664 CHRNA2Q15822 529 aa19.93■□□□□ 0.78
MSRB3-206ENST00000535664 UPF1Q92900 1129 aaKnown RBP eCLIP19.93■□□□□ 0.78
MSRB3-206ENST00000535664 SPATA31A5Q5VU36 1347 aa19.93■□□□□ 0.78
MSRB3-206ENST00000535664 SPATA31A7Q8IWB4 1347 aa19.93■□□□□ 0.78
MSRB3-206ENST00000535664 AATKQ6ZMQ8 1374 aa19.93■□□□□ 0.78
MSRB3-206ENST00000535664 NRKQ7Z2Y5 1582 aa19.92■□□□□ 0.78
MSRB3-206ENST00000535664 PANK3Q9H999 370 aa19.92■□□□□ 0.78
MSRB3-206ENST00000535664 MON2Q7Z3U7 1717 aa19.91■□□□□ 0.78
MSRB3-206ENST00000535664 PER1O15534 1290 aaPredicted RBP19.91■□□□□ 0.78
MSRB3-206ENST00000535664 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
MSRB3-206ENST00000535664 A0A1W2PP64 1363 aa19.91■□□□□ 0.78
MSRB3-206ENST00000535664 ANKRD36BQ8N2N9 1353 aa19.91■□□□□ 0.78
MSRB3-206ENST00000535664 GLI3P10071 1580 aa19.91■□□□□ 0.78
MSRB3-206ENST00000535664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.9■□□□□ 0.78
MSRB3-206ENST00000535664 PIK3C2AO00443 1686 aa19.9■□□□□ 0.78
MSRB3-206ENST00000535664 NRAPQ86VF7 1730 aa19.9■□□□□ 0.78
MSRB3-206ENST00000535664 ARHGEF25Q86VW2 580 aa19.89■□□□□ 0.77
MSRB3-206ENST00000535664 STRN4Q9NRL3 753 aa19.89■□□□□ 0.77
MSRB3-206ENST00000535664 THRAP3Q9Y2W1 955 aaKnown RBP19.89■□□□□ 0.77
MSRB3-206ENST00000535664 SPATA31A1Q5TZJ5 1347 aa19.88■□□□□ 0.77
MSRB3-206ENST00000535664 FAM98CQ17RN3 349 aaKnown RBP19.87■□□□□ 0.77
MSRB3-206ENST00000535664 BARGINQ6ZT62 677 aa19.87■□□□□ 0.77
MSRB3-206ENST00000535664 CARD14Q9BXL6 1004 aa19.87■□□□□ 0.77
MSRB3-206ENST00000535664 A0A0G2JS52 829 aa19.86■□□□□ 0.77
MSRB3-206ENST00000535664 MYT1Q01538 1121 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms