RNA–Protein interactions for RNA: ENST00000535551.1

PGA3-202, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 3

Gene PGA3, Length 1,449 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-202ENST00000535551 CCDC136Q96JN2 1154 aa14.18□□□□□ -0.14
PGA3-202ENST00000535551 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
PGA3-202ENST00000535551 IRX6P78412 446 aaPredicted RBP14.17□□□□□ -0.14
PGA3-202ENST00000535551 B4GALNT3Q6L9W6 998 aa14.17□□□□□ -0.14
PGA3-202ENST00000535551 TESK2Q96S53 571 aa14.17□□□□□ -0.14
PGA3-202ENST00000535551 PRR36Q9H6K5 1346 aa14.17□□□□□ -0.14
PGA3-202ENST00000535551 SBNO1A3KN83 1393 aa14.17□□□□□ -0.14
PGA3-202ENST00000535551 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
PGA3-202ENST00000535551 FOXO3O43524 673 aa14.16□□□□□ -0.14
PGA3-202ENST00000535551 PSME1Q06323 249 aa14.16□□□□□ -0.14
PGA3-202ENST00000535551 CDK19Q9BWU1 502 aa14.16□□□□□ -0.14
PGA3-202ENST00000535551 CCDC61Q9Y6R9 512 aa14.16□□□□□ -0.14
PGA3-202ENST00000535551 EVC2Q86UK5 1308 aa14.16□□□□□ -0.14
PGA3-202ENST00000535551 NUDT16Q96DE0 195 aaKnown RBP14.15□□□□□ -0.14
PGA3-202ENST00000535551 POLR3AO14802 1390 aaPredicted RBP14.15□□□□□ -0.14
PGA3-202ENST00000535551 BRD4O60885 1362 aaPredicted RBP14.15□□□□□ -0.14
PGA3-202ENST00000535551 TNS3Q68CZ2 1445 aa14.15□□□□□ -0.14
PGA3-202ENST00000535551 ARHGEF10O15013 1369 aa14.15□□□□□ -0.14
PGA3-202ENST00000535551 LRP6O75581 1613 aa14.15□□□□□ -0.14
PGA3-202ENST00000535551 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
PGA3-202ENST00000535551 MYOM1P52179 1685 aa14.15□□□□□ -0.14
PGA3-202ENST00000535551 ALS2Q96Q42 1657 aa14.15□□□□□ -0.14
PGA3-202ENST00000535551 MARF1Q9Y4F3 1742 aaKnown RBP14.14□□□□□ -0.15
PGA3-202ENST00000535551 SPATA31A3Q5VYP0 1347 aa14.14□□□□□ -0.15
PGA3-202ENST00000535551 ATAD2Q6PL18 1390 aa14.13□□□□□ -0.15
PGA3-202ENST00000535551 PLEKHG3A1L390 1219 aa14.13□□□□□ -0.15
PGA3-202ENST00000535551 KRT28Q7Z3Y7 464 aa14.13□□□□□ -0.15
PGA3-202ENST00000535551 PUS7Q96PZ0 661 aaKnown RBP14.13□□□□□ -0.15
PGA3-202ENST00000535551 PRKRIP1Q9H875 184 aaPredicted RBP14.13□□□□□ -0.15
PGA3-202ENST00000535551 SRPK2P78362 688 aaKnown RBP14.12□□□□□ -0.15
PGA3-202ENST00000535551 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
PGA3-202ENST00000535551 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
PGA3-202ENST00000535551 ABCA3Q99758 1704 aa14.11□□□□□ -0.15
PGA3-202ENST00000535551 TCERG1O14776 1098 aaKnown RBP14.11□□□□□ -0.15
PGA3-202ENST00000535551 MS4A1P11836 297 aa14.11□□□□□ -0.15
PGA3-202ENST00000535551 PPIP5K1Q6PFW1 1433 aa14.11□□□□□ -0.15
PGA3-202ENST00000535551 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
PGA3-202ENST00000535551 EIF4G2P78344 907 aaKnown RBP eCLIP14.1□□□□□ -0.15
PGA3-202ENST00000535551 ILDR2Q71H61 639 aa14.1□□□□□ -0.15
PGA3-202ENST00000535551 NGDNQ8NEJ9 315 aaKnown RBP14.1□□□□□ -0.15
PGA3-202ENST00000535551 NUDCQ9Y266 331 aa14.1□□□□□ -0.15
PGA3-202ENST00000535551 AKAP12Q02952 1782 aa14.1□□□□□ -0.15
PGA3-202ENST00000535551 XPCQ01831 940 aaPredicted RBP14.09□□□□□ -0.15
PGA3-202ENST00000535551 IL27Q8NEV9 243 aa14.09□□□□□ -0.15
PGA3-202ENST00000535551 PMFBP1Q8TBY8 1022 aa14.09□□□□□ -0.15
PGA3-202ENST00000535551 CRYBG1Q9Y4K1 1723 aa14.08□□□□□ -0.16
PGA3-202ENST00000535551 NINLQ9Y2I6 1382 aa14.08□□□□□ -0.16
PGA3-202ENST00000535551 MEX3CQ5U5Q3 659 aaKnown RBP14.07□□□□□ -0.16
PGA3-202ENST00000535551 ACEP12821 1306 aa14.07□□□□□ -0.16
PGA3-202ENST00000535551 NUTM2BA6NNL0 878 aaPredicted RBP14.07□□□□□ -0.16
PGA3-202ENST00000535551 NUTM2EB1AL46 878 aaPredicted RBP14.07□□□□□ -0.16
PGA3-202ENST00000535551 ZNF772Q68DY9 489 aaPredicted RBP14.07□□□□□ -0.16
PGA3-202ENST00000535551 NUTM2AQ8IVF1 878 aaPredicted RBP14.07□□□□□ -0.16
PGA3-202ENST00000535551 CD163L1Q9NR16 1453 aa14.06□□□□□ -0.16
PGA3-202ENST00000535551 MON2Q7Z3U7 1717 aa14.06□□□□□ -0.16
PGA3-202ENST00000535551 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.06□□□□□ -0.16
PGA3-202ENST00000535551 NRKQ7Z2Y5 1582 aa14.06□□□□□ -0.16
PGA3-202ENST00000535551 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
PGA3-202ENST00000535551 USP6P35125 1406 aa14.05□□□□□ -0.16
PGA3-202ENST00000535551 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
PGA3-202ENST00000535551 DDRGK1Q96HY6 314 aa14.05□□□□□ -0.16
PGA3-202ENST00000535551 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
PGA3-202ENST00000535551 NWD2Q9ULI1 1742 aa14.05□□□□□ -0.16
PGA3-202ENST00000535551 CPSF1Q10570 1443 aaKnown RBP14.04□□□□□ -0.16
PGA3-202ENST00000535551 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
PGA3-202ENST00000535551 PHRF1Q9P1Y6 1649 aaKnown RBP14.03□□□□□ -0.16
PGA3-202ENST00000535551 CDCA8Q53HL2 280 aa14.03□□□□□ -0.16
PGA3-202ENST00000535551 RGS17Q9UGC6 210 aaPredicted RBP14.03□□□□□ -0.16
PGA3-202ENST00000535551 SSH2Q76I76 1423 aa14.03□□□□□ -0.16
PGA3-202ENST00000535551 NEFMP07197 916 aa14.02□□□□□ -0.16
PGA3-202ENST00000535551 FNBP4Q8N3X1 1017 aaPredicted RBP14.02□□□□□ -0.16
PGA3-202ENST00000535551 CABP1Q9NZU7 370 aa14.02□□□□□ -0.16
PGA3-202ENST00000535551 USP54Q70EL1 1684 aa14.02□□□□□ -0.17
PGA3-202ENST00000535551 TMF1P82094 1093 aa14.01□□□□□ -0.17
PGA3-202ENST00000535551 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
PGA3-202ENST00000535551 COL14A1Q05707 1796 aaKnown RBP14□□□□□ -0.17
PGA3-202ENST00000535551 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
PGA3-202ENST00000535551 SLC12A5Q9H2X9 1139 aa14□□□□□ -0.17
PGA3-202ENST00000535551 AFF2P51816 1311 aa14□□□□□ -0.17
PGA3-202ENST00000535551 KIF7Q2M1P5 1343 aa14□□□□□ -0.17
PGA3-202ENST00000535551 TTC21AQ8NDW8 1320 aa14□□□□□ -0.17
PGA3-202ENST00000535551 SLIT2O94813 1529 aa14□□□□□ -0.17
PGA3-202ENST00000535551 PIK3C2AO00443 1686 aa14□□□□□ -0.17
PGA3-202ENST00000535551 ADAMTS2O95450 1211 aa13.99□□□□□ -0.17
PGA3-202ENST00000535551 NGLY1Q96IV0 654 aa13.99□□□□□ -0.17
PGA3-202ENST00000535551 C8orf37Q96NL8 207 aa13.99□□□□□ -0.17
PGA3-202ENST00000535551 USP19O94966 1318 aa13.99□□□□□ -0.17
PGA3-202ENST00000535551 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
PGA3-202ENST00000535551 GSE1Q14687 1217 aa13.98□□□□□ -0.17
PGA3-202ENST00000535551 LMOD2Q6P5Q4 547 aa13.98□□□□□ -0.17
PGA3-202ENST00000535551 POLR3GLQ9BT43 218 aa13.98□□□□□ -0.17
PGA3-202ENST00000535551 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
PGA3-202ENST00000535551 CCDC184Q52MB2 194 aa13.98□□□□□ -0.17
PGA3-202ENST00000535551 BACH2Q9BYV9 841 aa13.98□□□□□ -0.17
PGA3-202ENST00000535551 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
PGA3-202ENST00000535551 SLIT3O75094 1523 aa13.97□□□□□ -0.17
PGA3-202ENST00000535551 A0A1W2PP64 1363 aa13.97□□□□□ -0.17
PGA3-202ENST00000535551 EDC4Q6P2E9 1401 aaKnown RBP13.97□□□□□ -0.17
PGA3-202ENST00000535551 HDGFL2Q7Z4V5 671 aaPredicted RBP13.97□□□□□ -0.17
PGA3-202ENST00000535551 NLRP13Q86W25 1043 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms