RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SPINK5Q9NQ38 1064 aaPredicted RBP15.17■□□□□ 0.02
SPG11-203ENST00000535302 NOB1Q9ULX3 412 aaKnown RBP15.17■□□□□ 0.02
SPG11-203ENST00000535302 STK3Q13188 491 aa15.16■□□□□ 0.02
SPG11-203ENST00000535302 FAM177A1Q8N128 213 aaPredicted RBP15.16■□□□□ 0.02
SPG11-203ENST00000535302 PIBF1Q8WXW3 757 aa15.16■□□□□ 0.02
SPG11-203ENST00000535302 FGD6Q6ZV73 1430 aa15.16■□□□□ 0.02
SPG11-203ENST00000535302 RSPH6AQ9H0K4 717 aa15.16■□□□□ 0.02
SPG11-203ENST00000535302 H0YHG0 523 aa15.16■□□□□ 0.02
SPG11-203ENST00000535302 SAFBQ15424 915 aaKnown RBP eCLIP15.16■□□□□ 0.02
SPG11-203ENST00000535302 BCAR3O75815 825 aa15.15■□□□□ 0.02
SPG11-203ENST00000535302 WASHC2AQ641Q2 1341 aa15.15■□□□□ 0.02
SPG11-203ENST00000535302 CDC45O75419 566 aa15.15■□□□□ 0.02
SPG11-203ENST00000535302 HSP90AB3PQ58FF7 597 aa15.15■□□□□ 0.02
SPG11-203ENST00000535302 CCDC73Q6ZRK6 1079 aa15.15■□□□□ 0.02
SPG11-203ENST00000535302 CHMP4BP1P59074 171 aa15.15■□□□□ 0.02
SPG11-203ENST00000535302 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
SPG11-203ENST00000535302 IGF1RP08069 1367 aa15.14■□□□□ 0.01
SPG11-203ENST00000535302 CNTROBQ8N137 903 aa15.14■□□□□ 0.01
SPG11-203ENST00000535302 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
SPG11-203ENST00000535302 KIF6Q6ZMV9 814 aa15.14■□□□□ 0.01
SPG11-203ENST00000535302 PPP2R1AP30153 589 aa15.14■□□□□ 0.01
SPG11-203ENST00000535302 HSP90AB4PQ58FF6 505 aa15.14■□□□□ 0.01
SPG11-203ENST00000535302 MIA2Q96PC5 1412 aa15.13■□□□□ 0.01
SPG11-203ENST00000535302 CNTLNQ9NXG0 1405 aa15.13■□□□□ 0.01
SPG11-203ENST00000535302 SLC12A5Q9H2X9 1139 aa15.13■□□□□ 0.01
SPG11-203ENST00000535302 ANKRD50Q9ULJ7 1429 aa15.13■□□□□ 0.01
SPG11-203ENST00000535302 TTC39AQ5SRH9 613 aa15.13■□□□□ 0.01
SPG11-203ENST00000535302 CENPHQ9H3R5 247 aa15.13■□□□□ 0.01
SPG11-203ENST00000535302 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
SPG11-203ENST00000535302 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
SPG11-203ENST00000535302 TWISTNBQ3B726 338 aaPredicted RBP15.12■□□□□ 0.01
SPG11-203ENST00000535302 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
SPG11-203ENST00000535302 PDZRN3Q9UPQ7 1066 aa15.12■□□□□ 0.01
SPG11-203ENST00000535302 PIP4K2BP78356 416 aa15.12■□□□□ 0.01
SPG11-203ENST00000535302 SDF4Q9BRK5 362 aa15.12■□□□□ 0.01
SPG11-203ENST00000535302 SULT6B1Q6IMI4 303 aa15.12■□□□□ 0.01
SPG11-203ENST00000535302 FAM193AP78312 1265 aa15.11■□□□□ 0.01
SPG11-203ENST00000535302 CCDC85AQ96PX6 553 aaPredicted RBP15.11■□□□□ 0.01
SPG11-203ENST00000535302 CDK19Q9BWU1 502 aa15.11■□□□□ 0.01
SPG11-203ENST00000535302 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
SPG11-203ENST00000535302 NINLQ9Y2I6 1382 aa15.11■□□□□ 0.01
SPG11-203ENST00000535302 PPM1FP49593 454 aaPredicted RBP15.11■□□□□ 0.01
SPG11-203ENST00000535302 CCDC97Q96F63 343 aaPredicted RBP15.11■□□□□ 0.01
SPG11-203ENST00000535302 RRS1Q15050 365 aaKnown RBP15.11■□□□□ 0.01
SPG11-203ENST00000535302 KRT18P05783 430 aaKnown RBP15.11■□□□□ 0.01
SPG11-203ENST00000535302 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
SPG11-203ENST00000535302 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
SPG11-203ENST00000535302 NEK4P51957 841 aa15.1■□□□□ 0.01
SPG11-203ENST00000535302 CDK5RAP3Q96JB5 506 aa15.1■□□□□ 0.01
SPG11-203ENST00000535302 NFKBIBQ15653 356 aa15.1■□□□□ 0.01
SPG11-203ENST00000535302 AXDND1Q5T1B0 1012 aaPredicted RBP15.1■□□□□ 0.01
SPG11-203ENST00000535302 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
SPG11-203ENST00000535302 HSP90B2PQ58FF3 399 aa15.1■□□□□ 0.01
SPG11-203ENST00000535302 CLASRPQ8N2M8 674 aaKnown RBP15.09■□□□□ 0.01
SPG11-203ENST00000535302 TOM1L2Q6ZVM7 507 aa15.09■□□□□ 0.01
SPG11-203ENST00000535302 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
SPG11-203ENST00000535302 TBC1D2BQ9UPU7 963 aa15.09■□□□□ 0.01
SPG11-203ENST00000535302 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
SPG11-203ENST00000535302 FAM43AQ8N2R8 423 aa15.09■□□□□ 0.01
SPG11-203ENST00000535302 BRMS1Q9HCU9 246 aa15.09■□□□□ 0.01
SPG11-203ENST00000535302 SEPT11Q9NVA2 429 aaKnown RBP15.09■□□□□ 0.01
SPG11-203ENST00000535302 CABP4P57796 275 aa15.09■□□□□ 0.01
SPG11-203ENST00000535302 PRPF40AO75400 957 aaKnown RBP15.08■□□□□ 0.01
SPG11-203ENST00000535302 NUCB2P80303 420 aa15.08■□□□□ 0.01
SPG11-203ENST00000535302 PLEKHO1Q53GL0 409 aaPredicted RBP15.08■□□□□ 0.01
SPG11-203ENST00000535302 WWC2Q6AWC2 1192 aa15.08■□□□□ 0.01
SPG11-203ENST00000535302 NCOA2Q15596 1464 aa15.08■□□□□ 0.01
SPG11-203ENST00000535302 ENOX2Q16206 610 aaKnown RBP15.08■□□□□ 0
SPG11-203ENST00000535302 TRIM5Q9C035 493 aa15.08■□□□□ 0
SPG11-203ENST00000535302 SLC26A8Q96RN1 970 aa15.08■□□□□ 0
SPG11-203ENST00000535302 MATR3P43243 847 aaKnown RBP eCLIP15.07■□□□□ 0
SPG11-203ENST00000535302 CCDC173Q0VFZ6 552 aa15.07■□□□□ 0
SPG11-203ENST00000535302 TAX1BP1Q86VP1 789 aa15.07■□□□□ 0
SPG11-203ENST00000535302 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
SPG11-203ENST00000535302 FIBPO43427 364 aa15.07■□□□□ 0
SPG11-203ENST00000535302 SYCP1Q15431 976 aa15.07■□□□□ 0
SPG11-203ENST00000535302 GAS2L2Q8NHY3 880 aa15.06■□□□□ 0
SPG11-203ENST00000535302 PSMA5P28066 241 aa15.06■□□□□ 0
SPG11-203ENST00000535302 HDGFL1Q5TGJ6 251 aa15.06■□□□□ 0
SPG11-203ENST00000535302 CCDC191Q8NCU4 936 aa15.06■□□□□ 0
SPG11-203ENST00000535302 TANGO6Q9C0B7 1094 aa15.06■□□□□ 0
SPG11-203ENST00000535302 LRRC9Q6ZRR7 1453 aa15.06■□□□□ 0
SPG11-203ENST00000535302 CDR1P51861 262 aa15.06■□□□□ 0
SPG11-203ENST00000535302 KIF21BO75037 1637 aa15.06■□□□□ 0
SPG11-203ENST00000535302 TATP17735 454 aaPredicted RBP15.05■□□□□ 0
SPG11-203ENST00000535302 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.05■□□□□ 0
SPG11-203ENST00000535302 AKNAQ7Z591 1439 aa15.05■□□□□ 0
SPG11-203ENST00000535302 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
SPG11-203ENST00000535302 PDCL3Q9H2J4 239 aa15.05■□□□□ -0
SPG11-203ENST00000535302 ARGLU1Q9NWB6 273 aaPredicted RBP15.05■□□□□ -0
SPG11-203ENST00000535302 TTC16Q8NEE8 873 aa15.05■□□□□ -0
SPG11-203ENST00000535302 MAGEC2Q9UBF1 373 aaPredicted RBP15.05■□□□□ -0
SPG11-203ENST00000535302 CUX1P39880 1505 aa15.05■□□□□ -0
SPG11-203ENST00000535302 C11orf95C9JLR9 678 aaPredicted RBP15.05■□□□□ -0
SPG11-203ENST00000535302 GNAI2P04899 355 aa15.04■□□□□ -0
SPG11-203ENST00000535302 NASPP49321 788 aaPredicted RBP15.04■□□□□ -0
SPG11-203ENST00000535302 SEPT7Q16181 437 aaKnown RBP15.04■□□□□ -0
SPG11-203ENST00000535302 NOM1Q5C9Z4 860 aaKnown RBP15.04■□□□□ -0
SPG11-203ENST00000535302 RDXP35241 583 aaKnown RBP15.04■□□□□ -0
SPG11-203ENST00000535302 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms