RNA–Protein interactions for RNA: ENST00000535190.1

NPIPB3-207, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-207ENST00000535190 ATAD2Q6PL18 1390 aa11.57□□□□□ -0.56
NPIPB3-207ENST00000535190 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
NPIPB3-207ENST00000535190 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
NPIPB3-207ENST00000535190 ACEP12821 1306 aa11.57□□□□□ -0.56
NPIPB3-207ENST00000535190 BRWD3Q6RI45 1802 aa11.56□□□□□ -0.56
NPIPB3-207ENST00000535190 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
NPIPB3-207ENST00000535190 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
NPIPB3-207ENST00000535190 SEPT12Q8IYM1 358 aa11.55□□□□□ -0.56
NPIPB3-207ENST00000535190 PLCH1Q4KWH8 1693 aa11.55□□□□□ -0.56
NPIPB3-207ENST00000535190 NRAPQ86VF7 1730 aa11.55□□□□□ -0.56
NPIPB3-207ENST00000535190 CCDC125Q86Z20 511 aa11.54□□□□□ -0.56
NPIPB3-207ENST00000535190 BTG4Q9NY30 223 aa11.54□□□□□ -0.56
NPIPB3-207ENST00000535190 TOPAZ1Q8N9V7 1692 aa11.54□□□□□ -0.56
NPIPB3-207ENST00000535190 CENPJQ9HC77 1338 aaPredicted RBP11.54□□□□□ -0.56
NPIPB3-207ENST00000535190 ITSN1Q15811 1721 aa11.53□□□□□ -0.56
NPIPB3-207ENST00000535190 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
NPIPB3-207ENST00000535190 COL14A1Q05707 1796 aaKnown RBP11.52□□□□□ -0.57
NPIPB3-207ENST00000535190 EP400Q96L91 3159 aa11.52□□□□□ -0.57
NPIPB3-207ENST00000535190 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
NPIPB3-207ENST00000535190 NEUROD1Q13562 356 aa11.51□□□□□ -0.57
NPIPB3-207ENST00000535190 NUTM2GQ5VZR2 741 aa11.51□□□□□ -0.57
NPIPB3-207ENST00000535190 SPATA31A5Q5VU36 1347 aa11.51□□□□□ -0.57
NPIPB3-207ENST00000535190 SPATA31A7Q8IWB4 1347 aa11.51□□□□□ -0.57
NPIPB3-207ENST00000535190 TRPM1Q7Z4N2 1603 aa11.5□□□□□ -0.57
NPIPB3-207ENST00000535190 CABP1Q9NZU7 370 aa11.5□□□□□ -0.57
NPIPB3-207ENST00000535190 USP19O94966 1318 aa11.5□□□□□ -0.57
NPIPB3-207ENST00000535190 KIAA0232Q92628 1395 aa11.5□□□□□ -0.57
NPIPB3-207ENST00000535190 SSH2Q76I76 1423 aa11.5□□□□□ -0.57
NPIPB3-207ENST00000535190 SRPK2P78362 688 aaKnown RBP11.49□□□□□ -0.57
NPIPB3-207ENST00000535190 CHRNA2Q15822 529 aa11.49□□□□□ -0.57
NPIPB3-207ENST00000535190 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
NPIPB3-207ENST00000535190 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
NPIPB3-207ENST00000535190 PRDM11Q9NQV5 511 aa11.49□□□□□ -0.57
NPIPB3-207ENST00000535190 CCDC9Q9Y3X0 531 aaKnown RBP11.49□□□□□ -0.57
NPIPB3-207ENST00000535190 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
NPIPB3-207ENST00000535190 ZC3H6P61129 1189 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-207ENST00000535190 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
NPIPB3-207ENST00000535190 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
NPIPB3-207ENST00000535190 BLMP54132 1417 aaPredicted RBP11.48□□□□□ -0.57
NPIPB3-207ENST00000535190 PHRF1Q9P1Y6 1649 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-207ENST00000535190 QRICH2Q9H0J4 1663 aa11.48□□□□□ -0.57
NPIPB3-207ENST00000535190 BRD4O60885 1362 aaPredicted RBP11.47□□□□□ -0.57
NPIPB3-207ENST00000535190 CPDO75976 1380 aa11.47□□□□□ -0.57
NPIPB3-207ENST00000535190 SPATA31A1Q5TZJ5 1347 aa11.47□□□□□ -0.57
NPIPB3-207ENST00000535190 GCP02774 474 aa11.47□□□□□ -0.57
NPIPB3-207ENST00000535190 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.57
NPIPB3-207ENST00000535190 NLRP13Q86W25 1043 aa11.46□□□□□ -0.57
NPIPB3-207ENST00000535190 THSD7AQ9UPZ6 1657 aa11.46□□□□□ -0.58
NPIPB3-207ENST00000535190 USP6P35125 1406 aa11.45□□□□□ -0.58
NPIPB3-207ENST00000535190 EVC2Q86UK5 1308 aa11.45□□□□□ -0.58
NPIPB3-207ENST00000535190 ROCK2O75116 1388 aaKnown RBP11.44□□□□□ -0.58
NPIPB3-207ENST00000535190 LMO7Q8WWI1 1683 aa11.44□□□□□ -0.58
NPIPB3-207ENST00000535190 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
NPIPB3-207ENST00000535190 NRKQ7Z2Y5 1582 aa11.44□□□□□ -0.58
NPIPB3-207ENST00000535190 LARP1Q6PKG0 1096 aaKnown RBP11.43□□□□□ -0.58
NPIPB3-207ENST00000535190 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
NPIPB3-207ENST00000535190 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
NPIPB3-207ENST00000535190 STRN4Q9NRL3 753 aa11.43□□□□□ -0.58
NPIPB3-207ENST00000535190 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
NPIPB3-207ENST00000535190 CPSF1Q10570 1443 aaKnown RBP11.43□□□□□ -0.58
NPIPB3-207ENST00000535190 SBNO2Q9Y2G9 1366 aa11.42□□□□□ -0.58
NPIPB3-207ENST00000535190 TTC21BQ7Z4L5 1316 aa11.42□□□□□ -0.58
NPIPB3-207ENST00000535190 NLRP6P59044 892 aa11.42□□□□□ -0.58
NPIPB3-207ENST00000535190 COL18A1P39060 1754 aa11.41□□□□□ -0.58
NPIPB3-207ENST00000535190 SLIT3O75094 1523 aa11.41□□□□□ -0.58
NPIPB3-207ENST00000535190 EVA1CP58658 441 aa11.41□□□□□ -0.58
NPIPB3-207ENST00000535190 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
NPIPB3-207ENST00000535190 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
NPIPB3-207ENST00000535190 PIK3C2AO00443 1686 aa11.4□□□□□ -0.58
NPIPB3-207ENST00000535190 ARHGEF25Q86VW2 580 aa11.4□□□□□ -0.58
NPIPB3-207ENST00000535190 TCP11L2Q8N4U5 519 aa11.4□□□□□ -0.58
NPIPB3-207ENST00000535190 AKAP12Q02952 1782 aa11.4□□□□□ -0.58
NPIPB3-207ENST00000535190 COL5A2P05997 1499 aaPredicted RBP11.39□□□□□ -0.59
NPIPB3-207ENST00000535190 A0A0G2JS52 829 aa11.39□□□□□ -0.59
NPIPB3-207ENST00000535190 MYT1Q01538 1121 aa11.39□□□□□ -0.59
NPIPB3-207ENST00000535190 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
NPIPB3-207ENST00000535190 USP35Q9P2H5 1018 aa11.39□□□□□ -0.59
NPIPB3-207ENST00000535190 THRAP3Q9Y2W1 955 aaKnown RBP11.39□□□□□ -0.59
NPIPB3-207ENST00000535190 CD163L1Q9NR16 1453 aa11.38□□□□□ -0.59
NPIPB3-207ENST00000535190 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
NPIPB3-207ENST00000535190 EN1Q05925 392 aaPredicted RBP11.38□□□□□ -0.59
NPIPB3-207ENST00000535190 SF3B2Q13435 895 aaKnown RBP11.38□□□□□ -0.59
NPIPB3-207ENST00000535190 FAM196AQ6ZSG2 479 aa11.38□□□□□ -0.59
NPIPB3-207ENST00000535190 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
NPIPB3-207ENST00000535190 TESK2Q96S53 571 aa11.38□□□□□ -0.59
NPIPB3-207ENST00000535190 TTC21AQ8NDW8 1320 aa11.37□□□□□ -0.59
NPIPB3-207ENST00000535190 BAG6P46379 1132 aa11.37□□□□□ -0.59
NPIPB3-207ENST00000535190 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
NPIPB3-207ENST00000535190 CAMKK2Q96RR4 588 aa11.37□□□□□ -0.59
NPIPB3-207ENST00000535190 SLC12A5Q9H2X9 1139 aa11.37□□□□□ -0.59
NPIPB3-207ENST00000535190 USP31Q70CQ4 1352 aa11.37□□□□□ -0.59
NPIPB3-207ENST00000535190 TRIM37O94972 964 aa11.36□□□□□ -0.59
NPIPB3-207ENST00000535190 SRCAPQ6ZRS2 3230 aa11.36□□□□□ -0.59
NPIPB3-207ENST00000535190 CRB1P82279 1406 aa11.35□□□□□ -0.59
NPIPB3-207ENST00000535190 TNS1Q9HBL0 1735 aaKnown RBP11.35□□□□□ -0.59
NPIPB3-207ENST00000535190 EZH2Q15910 746 aaKnown RBP11.35□□□□□ -0.59
NPIPB3-207ENST00000535190 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
NPIPB3-207ENST00000535190 KTN1Q86UP2 1357 aaKnown RBP11.35□□□□□ -0.59
NPIPB3-207ENST00000535190 TONSLQ96HA7 1378 aa11.35□□□□□ -0.59
NPIPB3-207ENST00000535190 RGPD5Q99666 1765 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms