RNA–Protein interactions for RNA: ENST00000535106.5

VPS45-211, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-211ENST00000535106 NLRP1Q9C000 1473 aa15.43■□□□□ 0.06
VPS45-211ENST00000535106 ZKSCAN2Q63HK3 967 aa15.42■□□□□ 0.06
VPS45-211ENST00000535106 GSE1Q14687 1217 aa15.42■□□□□ 0.06
VPS45-211ENST00000535106 DZIP1LQ8IYY4 767 aaKnown RBP15.41■□□□□ 0.06
VPS45-211ENST00000535106 POGKQ9P215 609 aa15.41■□□□□ 0.06
VPS45-211ENST00000535106 MYO5BQ9ULV0 1848 aa15.41■□□□□ 0.06
VPS45-211ENST00000535106 VIRMAQ69YN4 1812 aaKnown RBP15.41■□□□□ 0.06
VPS45-211ENST00000535106 SSH1Q8WYL5 1049 aa15.41■□□□□ 0.06
VPS45-211ENST00000535106 RWDD1Q9H446 243 aaPredicted RBP15.41■□□□□ 0.06
VPS45-211ENST00000535106 SMC4Q9NTJ3 1288 aa15.4■□□□□ 0.06
VPS45-211ENST00000535106 TRIM27P14373 513 aa15.4■□□□□ 0.06
VPS45-211ENST00000535106 FBLN1P23142 703 aa15.4■□□□□ 0.06
VPS45-211ENST00000535106 FTSJ3Q8IY81 847 aaKnown RBP15.4■□□□□ 0.06
VPS45-211ENST00000535106 TERF2IPQ9NYB0 399 aa15.4■□□□□ 0.06
VPS45-211ENST00000535106 YTHDC2Q9H6S0 1430 aaKnown RBP15.4■□□□□ 0.06
VPS45-211ENST00000535106 CDK19Q9BWU1 502 aa15.39■□□□□ 0.05
VPS45-211ENST00000535106 CABP1Q9NZU7 370 aa15.39■□□□□ 0.05
VPS45-211ENST00000535106 ATAD2Q6PL18 1390 aa15.39■□□□□ 0.05
VPS45-211ENST00000535106 TMEM131LA2VDJ0 1609 aa15.39■□□□□ 0.05
VPS45-211ENST00000535106 RICTORQ6R327 1708 aa15.39■□□□□ 0.05
VPS45-211ENST00000535106 RIPK4P57078 832 aa15.39■□□□□ 0.05
VPS45-211ENST00000535106 CT47B1P0C2W7 299 aaPredicted RBP15.37■□□□□ 0.05
VPS45-211ENST00000535106 NOB1Q9ULX3 412 aaKnown RBP15.37■□□□□ 0.05
VPS45-211ENST00000535106 PKNOX2Q96KN3 472 aa15.37■□□□□ 0.05
VPS45-211ENST00000535106 DIAPH1O60610 1272 aaKnown RBP15.36■□□□□ 0.05
VPS45-211ENST00000535106 PREX1Q8TCU6 1659 aa15.36■□□□□ 0.05
VPS45-211ENST00000535106 TBC1D32Q96NH3 1257 aa15.36■□□□□ 0.05
VPS45-211ENST00000535106 ATF7IPQ6VMQ6 1270 aa15.35■□□□□ 0.05
VPS45-211ENST00000535106 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
VPS45-211ENST00000535106 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
VPS45-211ENST00000535106 HDGFL2Q7Z4V5 671 aaPredicted RBP15.35■□□□□ 0.05
VPS45-211ENST00000535106 WAPLQ7Z5K2 1190 aa15.35■□□□□ 0.05
VPS45-211ENST00000535106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.35■□□□□ 0.05
VPS45-211ENST00000535106 MED14O60244 1454 aa15.34■□□□□ 0.05
VPS45-211ENST00000535106 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
VPS45-211ENST00000535106 ARHGEF40Q8TER5 1519 aa15.34■□□□□ 0.05
VPS45-211ENST00000535106 TMEM57Q8N5G2 664 aa15.34■□□□□ 0.05
VPS45-211ENST00000535106 IL16Q14005 1332 aa15.34■□□□□ 0.05
VPS45-211ENST00000535106 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
VPS45-211ENST00000535106 ZMYM3Q14202 1370 aa15.33■□□□□ 0.04
VPS45-211ENST00000535106 BECN1Q14457 450 aa15.32■□□□□ 0.04
VPS45-211ENST00000535106 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
VPS45-211ENST00000535106 CLTCQ00610 1675 aaKnown RBP15.32■□□□□ 0.04
VPS45-211ENST00000535106 HDAC1Q13547 482 aaPredicted RBP15.32■□□□□ 0.04
VPS45-211ENST00000535106 POLKQ9UBT6 870 aa15.32■□□□□ 0.04
VPS45-211ENST00000535106 DDX19BQ9UMR2 479 aa15.32■□□□□ 0.04
VPS45-211ENST00000535106 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
VPS45-211ENST00000535106 PRKAR2BP31323 418 aa15.31■□□□□ 0.04
VPS45-211ENST00000535106 ANTXR1Q9H6X2 564 aa15.31■□□□□ 0.04
VPS45-211ENST00000535106 UPF2Q9HAU5 1272 aaKnown RBP15.31■□□□□ 0.04
VPS45-211ENST00000535106 PHACTR3Q96KR7 559 aa15.3■□□□□ 0.04
VPS45-211ENST00000535106 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
VPS45-211ENST00000535106 ZBTB40Q9NUA8 1239 aa15.3■□□□□ 0.04
VPS45-211ENST00000535106 ANKRD26Q9UPS8 1709 aa15.3■□□□□ 0.04
VPS45-211ENST00000535106 FCHSD2O94868 740 aa15.3■□□□□ 0.04
VPS45-211ENST00000535106 THUMPD2Q9BTF0 503 aaKnown RBP15.3■□□□□ 0.04
VPS45-211ENST00000535106 HMOX1P09601 288 aa15.29■□□□□ 0.04
VPS45-211ENST00000535106 SMC5Q8IY18 1101 aa15.29■□□□□ 0.04
VPS45-211ENST00000535106 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
VPS45-211ENST00000535106 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
VPS45-211ENST00000535106 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
VPS45-211ENST00000535106 EMILIN1Q9Y6C2 1016 aa15.27■□□□□ 0.04
VPS45-211ENST00000535106 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.03
VPS45-211ENST00000535106 SPRYD3Q8NCJ5 442 aa15.27■□□□□ 0.03
VPS45-211ENST00000535106 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.03
VPS45-211ENST00000535106 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
VPS45-211ENST00000535106 FAM135BQ49AJ0 1406 aa15.26■□□□□ 0.03
VPS45-211ENST00000535106 IPO8O15397 1037 aaKnown RBP15.25■□□□□ 0.03
VPS45-211ENST00000535106 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
VPS45-211ENST00000535106 TSPYL6Q8N831 410 aa15.25■□□□□ 0.03
VPS45-211ENST00000535106 NME9Q86XW9 330 aa15.25■□□□□ 0.03
VPS45-211ENST00000535106 C22orf23Q9BZE7 217 aa15.25■□□□□ 0.03
VPS45-211ENST00000535106 NCKAP5LQ9HCH0 1330 aa15.25■□□□□ 0.03
VPS45-211ENST00000535106 KIF20BQ96Q89 1820 aa15.24■□□□□ 0.03
VPS45-211ENST00000535106 A2ML1A8K2U0 1454 aa15.24■□□□□ 0.03
VPS45-211ENST00000535106 FAM69CQ0P6D2 419 aa15.24■□□□□ 0.03
VPS45-211ENST00000535106 NFE2L2Q16236 605 aa15.24■□□□□ 0.03
VPS45-211ENST00000535106 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
VPS45-211ENST00000535106 VAMP4O75379 141 aa15.23■□□□□ 0.03
VPS45-211ENST00000535106 RIMS2Q9UQ26 1411 aa15.23■□□□□ 0.03
VPS45-211ENST00000535106 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
VPS45-211ENST00000535106 IL13P35225 146 aa15.23■□□□□ 0.03
VPS45-211ENST00000535106 NUCB1Q02818 461 aa15.23■□□□□ 0.03
VPS45-211ENST00000535106 MLECQ14165 292 aa15.23■□□□□ 0.03
VPS45-211ENST00000535106 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
VPS45-211ENST00000535106 MRPL50Q8N5N7 158 aaKnown RBP15.22■□□□□ 0.03
VPS45-211ENST00000535106 ATP7BP35670 1465 aa15.22■□□□□ 0.03
VPS45-211ENST00000535106 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.03
VPS45-211ENST00000535106 WASLO00401 505 aaPredicted RBP15.21■□□□□ 0.03
VPS45-211ENST00000535106 ZBTB7BO15156 539 aaPredicted RBP15.21■□□□□ 0.03
VPS45-211ENST00000535106 FAM43AQ8N2R8 423 aa15.21■□□□□ 0.03
VPS45-211ENST00000535106 DLC1Q96QB1 1528 aa15.21■□□□□ 0.02
VPS45-211ENST00000535106 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
VPS45-211ENST00000535106 TXNDC2Q86VQ3 553 aa15.2■□□□□ 0.02
VPS45-211ENST00000535106 MBIPQ9NS73 344 aa15.2■□□□□ 0.02
VPS45-211ENST00000535106 METP08581 1390 aa15.2■□□□□ 0.02
VPS45-211ENST00000535106 CPSF1Q10570 1443 aaKnown RBP15.2■□□□□ 0.02
VPS45-211ENST00000535106 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
VPS45-211ENST00000535106 PPIP5K1Q6PFW1 1433 aa15.2■□□□□ 0.02
VPS45-211ENST00000535106 MAP2P11137 1827 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms