RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RPIAP49247 311 aa7.07□□□□□ -1.28
SNHG1-201ENST00000535076 RETREG3Q86VR2 466 aa7.07□□□□□ -1.28
SNHG1-201ENST00000535076 GPBP1L1Q9HC44 474 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-201ENST00000535076 C6orf229H3BNL8 230 aa7.06□□□□□ -1.28
SNHG1-201ENST00000535076 SPTLC1O15269 473 aa7.06□□□□□ -1.28
SNHG1-201ENST00000535076 LAPTM4AQ15012 233 aa7.06□□□□□ -1.28
SNHG1-201ENST00000535076 PTCRAQ6ISU1 281 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-201ENST00000535076 FTSJ3Q8IY81 847 aaKnown RBP7.06□□□□□ -1.28
SNHG1-201ENST00000535076 LIMD1Q9UGP4 676 aa7.06□□□□□ -1.28
SNHG1-201ENST00000535076 PRR20EP86478 221 aa7.05□□□□□ -1.28
SNHG1-201ENST00000535076 PRR20CP86479 221 aa7.05□□□□□ -1.28
SNHG1-201ENST00000535076 PRR20DP86480 221 aa7.05□□□□□ -1.28
SNHG1-201ENST00000535076 PRR20BP86481 221 aa7.05□□□□□ -1.28
SNHG1-201ENST00000535076 PRR20AP86496 221 aa7.05□□□□□ -1.28
SNHG1-201ENST00000535076 MYSM1Q5VVJ2 828 aa7.05□□□□□ -1.28
SNHG1-201ENST00000535076 CABLES1Q8TDN4 633 aa7.05□□□□□ -1.28
SNHG1-201ENST00000535076 CFAP99D6REC4 459 aa7.04□□□□□ -1.28
SNHG1-201ENST00000535076 CALD1Q05682 793 aaKnown RBP7.04□□□□□ -1.28
SNHG1-201ENST00000535076 FOXC1Q12948 553 aa7.04□□□□□ -1.28
SNHG1-201ENST00000535076 SKOR1P84550 965 aa7.03□□□□□ -1.28
SNHG1-201ENST00000535076 TRIM32Q13049 653 aa7.03□□□□□ -1.28
SNHG1-201ENST00000535076 QPCTQ16769 361 aa7.03□□□□□ -1.28
SNHG1-201ENST00000535076 FBXO31Q5XUX0 539 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-201ENST00000535076 RIC3Q7Z5B4 369 aa7.03□□□□□ -1.28
SNHG1-201ENST00000535076 PRR7Q8TB68 274 aa7.03□□□□□ -1.28
SNHG1-201ENST00000535076 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-201ENST00000535076 NEFMP07197 916 aa7.02□□□□□ -1.29
SNHG1-201ENST00000535076 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
SNHG1-201ENST00000535076 TRAF7Q6Q0C0 670 aa7.02□□□□□ -1.29
SNHG1-201ENST00000535076 CCDC24Q8N4L8 307 aa7.02□□□□□ -1.29
SNHG1-201ENST00000535076 KDM4CQ9H3R0 1056 aa7.02□□□□□ -1.29
SNHG1-201ENST00000535076 GJA5P36382 358 aa7.01□□□□□ -1.29
SNHG1-201ENST00000535076 MTMR2Q13614 643 aa7.01□□□□□ -1.29
SNHG1-201ENST00000535076 CNGB1Q14028 1251 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-201ENST00000535076 NUDT12Q9BQG2 462 aa7.01□□□□□ -1.29
SNHG1-201ENST00000535076 FAM117AQ9C073 453 aa7.01□□□□□ -1.29
SNHG1-201ENST00000535076 WASHC2CQ9Y4E1 1318 aa7.01□□□□□ -1.29
SNHG1-201ENST00000535076 PLEKHG3A1L390 1219 aa7□□□□□ -1.29
SNHG1-201ENST00000535076 MCCP23508 829 aa7□□□□□ -1.29
SNHG1-201ENST00000535076 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
SNHG1-201ENST00000535076 IL27Q8NEV9 243 aa7□□□□□ -1.29
SNHG1-201ENST00000535076 TOR4AQ9NXH8 423 aa7□□□□□ -1.29
SNHG1-201ENST00000535076 USP35Q9P2H5 1018 aa7□□□□□ -1.29
SNHG1-201ENST00000535076 CD2BP2O95400 341 aaKnown RBP6.99□□□□□ -1.29
SNHG1-201ENST00000535076 PTMAP06454 111 aaKnown RBP6.99□□□□□ -1.29
SNHG1-201ENST00000535076 SETQ01105 290 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-201ENST00000535076 RTL5Q5HYW3 569 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-201ENST00000535076 POLR3GLQ9BT43 218 aa6.99□□□□□ -1.29
SNHG1-201ENST00000535076 FAM187AA6NFU0 413 aa6.98□□□□□ -1.29
SNHG1-201ENST00000535076 WNT7AO00755 349 aa6.98□□□□□ -1.29
SNHG1-201ENST00000535076 PPM1GO15355 546 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-201ENST00000535076 PER1O15534 1290 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-201ENST00000535076 LILRB3O75022 631 aa6.98□□□□□ -1.29
SNHG1-201ENST00000535076 CCNYL3P0C7X3 344 aa6.98□□□□□ -1.29
SNHG1-201ENST00000535076 GTF2E1P29083 439 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-201ENST00000535076 HSP90AA2PQ14568 343 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-201ENST00000535076 PTPRNQ16849 979 aa6.98□□□□□ -1.29
SNHG1-201ENST00000535076 FAM43AQ8N2R8 423 aa6.98□□□□□ -1.29
SNHG1-201ENST00000535076 POLR3EQ9NVU0 708 aa6.98□□□□□ -1.29
SNHG1-201ENST00000535076 PRDM4Q9UKN5 801 aa6.98□□□□□ -1.29
SNHG1-201ENST00000535076 ST8SIA5O15466 376 aa6.97□□□□□ -1.29
SNHG1-201ENST00000535076 ZBTB24O43167 697 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-201ENST00000535076 PTMSP20962 102 aa6.97□□□□□ -1.29
SNHG1-201ENST00000535076 DIXDC1Q155Q3 683 aa6.97□□□□□ -1.29
SNHG1-201ENST00000535076 ANP32BQ92688 251 aaKnown RBP6.97□□□□□ -1.29
SNHG1-201ENST00000535076 MRGPRX2Q96LB1 330 aa6.97□□□□□ -1.29
SNHG1-201ENST00000535076 ZBTB3Q9H5J0 574 aa6.97□□□□□ -1.29
SNHG1-201ENST00000535076 CLGNO14967 610 aa6.96□□□□□ -1.3
SNHG1-201ENST00000535076 DGAT1O75907 488 aa6.96□□□□□ -1.3
SNHG1-201ENST00000535076 CLK2P49760 499 aaKnown RBP6.96□□□□□ -1.3
SNHG1-201ENST00000535076 RC3H1Q5TC82 1133 aaKnown RBP6.96□□□□□ -1.3
SNHG1-201ENST00000535076 PRPF38BQ5VTL8 546 aaKnown RBP6.96□□□□□ -1.3
SNHG1-201ENST00000535076 DESI1Q6ICB0 168 aa6.96□□□□□ -1.3
SNHG1-201ENST00000535076 LYPD8Q6UX82 237 aa6.96□□□□□ -1.3
SNHG1-201ENST00000535076 SECISBP2LQ93073 1101 aaKnown RBP6.96□□□□□ -1.3
SNHG1-201ENST00000535076 EVA1BQ9NVM1 165 aa6.96□□□□□ -1.3
SNHG1-201ENST00000535076 WASHC2AQ641Q2 1341 aa6.96□□□□□ -1.3
SNHG1-201ENST00000535076 SPDYE5A6NIY4 337 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 POTECB2RU33 542 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 J3QL48 77 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 IGSF3O75054 1194 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 F12P00748 615 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-201ENST00000535076 SMPD1P17405 629 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 UBTFP17480 764 aaKnown RBP6.95□□□□□ -1.3
SNHG1-201ENST00000535076 MMP14P50281 582 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 SH3BP2P78314 561 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 KCNH2Q12809 1159 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 TUSC1Q2TAM9 212 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 PROCA1Q8NCQ7 364 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-201ENST00000535076 UNC93B1Q9H1C4 597 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
SNHG1-201ENST00000535076 CYP4X1Q8N118 509 aa6.94□□□□□ -1.3
SNHG1-201ENST00000535076 DACH1Q9UI36 760 aa6.94□□□□□ -1.3
SNHG1-201ENST00000535076 AXDND1Q5T1B0 1012 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-201ENST00000535076 BAP1Q92560 729 aa6.93□□□□□ -1.3
SNHG1-201ENST00000535076 PSMD1Q99460 953 aa6.93□□□□□ -1.3
SNHG1-201ENST00000535076 PLCD4Q9BRC7 762 aa6.93□□□□□ -1.3
SNHG1-201ENST00000535076 CHMP4BQ9H444 224 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms