RNA–Protein interactions for RNA: ENST00000534790.5

PDZD3-214, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-214ENST00000534790 IGHDP01880 384 aa21.5■■□□□ 1.03
PDZD3-214ENST00000534790 RRP7AQ9Y3A4 280 aaKnown RBP21.5■■□□□ 1.03
PDZD3-214ENST00000534790 PNPLA6Q8IY17 1366 aa21.49■■□□□ 1.03
PDZD3-214ENST00000534790 PANK1Q8TE04 598 aa21.49■■□□□ 1.03
PDZD3-214ENST00000534790 RWDD1Q9H446 243 aaPredicted RBP21.49■■□□□ 1.03
PDZD3-214ENST00000534790 NUTM2DQ5VT03 806 aaPredicted RBP21.48■■□□□ 1.03
PDZD3-214ENST00000534790 PLEKHF1Q96S99 279 aa21.48■■□□□ 1.03
PDZD3-214ENST00000534790 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
PDZD3-214ENST00000534790 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
PDZD3-214ENST00000534790 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
PDZD3-214ENST00000534790 ZKSCAN2Q63HK3 967 aa21.47■■□□□ 1.03
PDZD3-214ENST00000534790 PRAM1Q96QH2 718 aa21.47■■□□□ 1.03
PDZD3-214ENST00000534790 FYB1O15117 783 aa21.45■■□□□ 1.02
PDZD3-214ENST00000534790 STK26Q9P289 416 aa21.45■■□□□ 1.02
PDZD3-214ENST00000534790 SETD1AO15047 1707 aaKnown RBP21.45■■□□□ 1.02
PDZD3-214ENST00000534790 TMPOP42166 694 aaKnown RBP21.45■■□□□ 1.02
PDZD3-214ENST00000534790 MVPQ14764 893 aaKnown RBP21.44■■□□□ 1.02
PDZD3-214ENST00000534790 FRAT2O75474 233 aaPredicted RBP21.44■■□□□ 1.02
PDZD3-214ENST00000534790 ZNF428Q96B54 188 aa21.43■■□□□ 1.02
PDZD3-214ENST00000534790 DIAPH1O60610 1272 aaKnown RBP21.42■■□□□ 1.02
PDZD3-214ENST00000534790 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
PDZD3-214ENST00000534790 MINK1Q8N4C8 1332 aaPredicted RBP21.42■■□□□ 1.02
PDZD3-214ENST00000534790 A2ML1A8K2U0 1454 aa21.42■■□□□ 1.02
PDZD3-214ENST00000534790 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
PDZD3-214ENST00000534790 DZIP1LQ8IYY4 767 aaKnown RBP21.42■■□□□ 1.02
PDZD3-214ENST00000534790 GGNBP2Q9H3C7 697 aa21.42■■□□□ 1.02
PDZD3-214ENST00000534790 SAFB2Q14151 953 aaKnown RBP eCLIP21.41■■□□□ 1.02
PDZD3-214ENST00000534790 CDK19Q9BWU1 502 aa21.41■■□□□ 1.02
PDZD3-214ENST00000534790 FCHSD2O94868 740 aa21.41■■□□□ 1.02
PDZD3-214ENST00000534790 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
PDZD3-214ENST00000534790 KNDC1Q76NI1 1749 aa21.41■■□□□ 1.02
PDZD3-214ENST00000534790 U2SURPO15042 1029 aaKnown RBP21.4■■□□□ 1.02
PDZD3-214ENST00000534790 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
PDZD3-214ENST00000534790 UPF2Q9HAU5 1272 aaKnown RBP21.4■■□□□ 1.02
PDZD3-214ENST00000534790 BECN1Q14457 450 aa21.39■■□□□ 1.01
PDZD3-214ENST00000534790 KIF16BQ96L93 1317 aa21.39■■□□□ 1.01
PDZD3-214ENST00000534790 DDX19BQ9UMR2 479 aa21.39■■□□□ 1.01
PDZD3-214ENST00000534790 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.01
PDZD3-214ENST00000534790 IPO8O15397 1037 aaKnown RBP21.38■■□□□ 1.01
PDZD3-214ENST00000534790 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.38■■□□□ 1.01
PDZD3-214ENST00000534790 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
PDZD3-214ENST00000534790 RLBP1P12271 317 aa21.38■■□□□ 1.01
PDZD3-214ENST00000534790 CALD1Q05682 793 aaKnown RBP21.38■■□□□ 1.01
PDZD3-214ENST00000534790 PPIP5K1Q6PFW1 1433 aa21.37■■□□□ 1.01
PDZD3-214ENST00000534790 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
PDZD3-214ENST00000534790 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
PDZD3-214ENST00000534790 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
PDZD3-214ENST00000534790 SIRT1Q96EB6 747 aa21.36■■□□□ 1.01
PDZD3-214ENST00000534790 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
PDZD3-214ENST00000534790 EDC4Q6P2E9 1401 aaKnown RBP21.36■■□□□ 1.01
PDZD3-214ENST00000534790 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
PDZD3-214ENST00000534790 FAM135BQ49AJ0 1406 aa21.35■■□□□ 1.01
PDZD3-214ENST00000534790 BRPF1P55201 1214 aaPredicted RBP21.35■■□□□ 1.01
PDZD3-214ENST00000534790 FBXO31Q5XUX0 539 aaPredicted RBP21.35■■□□□ 1.01
PDZD3-214ENST00000534790 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.34■■□□□ 1.01
PDZD3-214ENST00000534790 LRRC7Q96NW7 1537 aa21.34■■□□□ 1.01
PDZD3-214ENST00000534790 EXOSC9Q06265 439 aaKnown RBP21.34■■□□□ 1.01
PDZD3-214ENST00000534790 ATF7IPQ6VMQ6 1270 aa21.34■■□□□ 1.01
PDZD3-214ENST00000534790 USP19O94966 1318 aa21.34■■□□□ 1.01
PDZD3-214ENST00000534790 RIPK4P57078 832 aa21.33■■□□□ 1.01
PDZD3-214ENST00000534790 PDZRN3Q9UPQ7 1066 aa21.33■■□□□ 1.01
PDZD3-214ENST00000534790 HDGFP51858 240 aaKnown RBP21.33■■□□□ 1.01
PDZD3-214ENST00000534790 CABP1Q9NZU7 370 aa21.33■■□□□ 1.01
PDZD3-214ENST00000534790 CDK12Q9NYV4 1490 aaPredicted RBP21.33■■□□□ 1
PDZD3-214ENST00000534790 AATKQ6ZMQ8 1374 aa21.33■■□□□ 1
PDZD3-214ENST00000534790 CPSF1Q10570 1443 aaKnown RBP21.32■■□□□ 1
PDZD3-214ENST00000534790 MAP2P11137 1827 aaKnown RBP21.32■■□□□ 1
PDZD3-214ENST00000534790 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
PDZD3-214ENST00000534790 TECPR2O15040 1411 aa21.31■■□□□ 1
PDZD3-214ENST00000534790 MON2Q7Z3U7 1717 aa21.31■■□□□ 1
PDZD3-214ENST00000534790 NRXN3Q9Y4C0 1643 aa21.31■■□□□ 1
PDZD3-214ENST00000534790 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
PDZD3-214ENST00000534790 TSPOAP1O95153 1857 aa21.29■■□□□ 1
PDZD3-214ENST00000534790 TRIM27P14373 513 aa21.29■■□□□ 1
PDZD3-214ENST00000534790 SSH1Q8WYL5 1049 aa21.29■■□□□ 1
PDZD3-214ENST00000534790 CPS1P31327 1500 aa21.28■■□□□ 1
PDZD3-214ENST00000534790 AKAP12Q02952 1782 aa21.28■■□□□ 1
PDZD3-214ENST00000534790 RSPH6AQ9H0K4 717 aa21.28■■□□□ 1
PDZD3-214ENST00000534790 ITSN1Q15811 1721 aa21.27■■□□□ 1
PDZD3-214ENST00000534790 SEC24BO95487 1268 aa21.27■■□□□ 1
PDZD3-214ENST00000534790 LMOD3Q0VAK6 560 aa21.27■■□□□ 1
PDZD3-214ENST00000534790 TBC1D32Q96NH3 1257 aa21.26■□□□□ 0.99
PDZD3-214ENST00000534790 POLKQ9UBT6 870 aa21.26■□□□□ 0.99
PDZD3-214ENST00000534790 TNNQ9UQP3 1299 aa21.26■□□□□ 0.99
PDZD3-214ENST00000534790 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
PDZD3-214ENST00000534790 NFE2L2Q16236 605 aa21.26■□□□□ 0.99
PDZD3-214ENST00000534790 ARHGAP45Q92619 1136 aa21.26■□□□□ 0.99
PDZD3-214ENST00000534790 SMC5Q8IY18 1101 aa21.25■□□□□ 0.99
PDZD3-214ENST00000534790 ITPRIPQ8IWB1 547 aa21.24■□□□□ 0.99
PDZD3-214ENST00000534790 FAM43AQ8N2R8 423 aa21.24■□□□□ 0.99
PDZD3-214ENST00000534790 NOB1Q9ULX3 412 aaKnown RBP21.24■□□□□ 0.99
PDZD3-214ENST00000534790 GNAI1P63096 354 aa21.22■□□□□ 0.99
PDZD3-214ENST00000534790 SLKQ9H2G2 1235 aaPredicted RBP21.22■□□□□ 0.99
PDZD3-214ENST00000534790 ZBTB40Q9NUA8 1239 aa21.22■□□□□ 0.99
PDZD3-214ENST00000534790 IFT57Q9NWB7 429 aa21.22■□□□□ 0.99
PDZD3-214ENST00000534790 C3P01024 1663 aa21.22■□□□□ 0.99
PDZD3-214ENST00000534790 PRKAR2BP31323 418 aa21.22■□□□□ 0.99
PDZD3-214ENST00000534790 ZNF692Q9BU19 519 aaPredicted RBP21.22■□□□□ 0.99
PDZD3-214ENST00000534790 PIK3R4Q99570 1358 aa21.21■□□□□ 0.99
PDZD3-214ENST00000534790 PTCH1Q13635 1447 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms