RNA–Protein interactions for RNA: ENST00000534749.5

PITPNM1-216, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNM1, Length 4,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-216ENST00000534749 PZPP20742 1482 aa18.21■□□□□ 0.51
PITPNM1-216ENST00000534749 TCOF1Q13428 1488 aaKnown RBP18.21■□□□□ 0.51
PITPNM1-216ENST00000534749 GPRASP1Q5JY77 1395 aa18.21■□□□□ 0.51
PITPNM1-216ENST00000534749 SMARCA5O60264 1052 aaPredicted RBP18.21■□□□□ 0.51
PITPNM1-216ENST00000534749 NUCB2P80303 420 aa18.21■□□□□ 0.51
PITPNM1-216ENST00000534749 RSPH6AQ9H0K4 717 aa18.21■□□□□ 0.51
PITPNM1-216ENST00000534749 HDAC5Q9UQL6 1122 aa18.21■□□□□ 0.51
PITPNM1-216ENST00000534749 NFE2L2Q16236 605 aa18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 RTEL1-TNFRSF6BF6WH68 1400 aa18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 SAMD9Q5K651 1589 aa18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 RLBP1P12271 317 aa18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 FOSBP53539 338 aa18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 NUDT16Q96DE0 195 aaKnown RBP18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 SCAF11Q99590 1463 aaKnown RBP18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 FAM83GA6ND36 823 aa18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 HSP90AA2PQ14568 343 aaPredicted RBP18.2■□□□□ 0.5
PITPNM1-216ENST00000534749 IL1RAPL2Q9NP60 686 aa18.19■□□□□ 0.5
PITPNM1-216ENST00000534749 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
PITPNM1-216ENST00000534749 MRE11P49959 708 aa18.19■□□□□ 0.5
PITPNM1-216ENST00000534749 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
PITPNM1-216ENST00000534749 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
PITPNM1-216ENST00000534749 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
PITPNM1-216ENST00000534749 RPGRIP1LQ68CZ1 1315 aa18.18■□□□□ 0.5
PITPNM1-216ENST00000534749 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
PITPNM1-216ENST00000534749 NEXNQ0ZGT2 675 aa18.18■□□□□ 0.5
PITPNM1-216ENST00000534749 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 TOMM22Q9NS69 142 aa18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 MAGI3Q5TCQ9 1506 aa18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 C14orf93Q9H972 538 aaKnown RBP18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 ADGRL1O94910 1474 aa18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 F6X3S4 739 aa18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 SEC24BO95487 1268 aa18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 CT47B1P0C2W7 299 aaPredicted RBP18.17■□□□□ 0.5
PITPNM1-216ENST00000534749 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
PITPNM1-216ENST00000534749 H3BQV1 296 aa18.16■□□□□ 0.5
PITPNM1-216ENST00000534749 G3BP1Q13283 466 aaKnown RBP eCLIP18.16■□□□□ 0.5
PITPNM1-216ENST00000534749 IFFO2Q5TF58 517 aa18.16■□□□□ 0.5
PITPNM1-216ENST00000534749 NRDCO43847 1150 aa18.16■□□□□ 0.5
PITPNM1-216ENST00000534749 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
PITPNM1-216ENST00000534749 C8orf34Q49A92 452 aa18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 SMC3Q9UQE7 1217 aa18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 ATAD2Q6PL18 1390 aa18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 FAM184AQ8NB25 1140 aa18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 PHF14O94880 888 aa18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 GNAI2P04899 355 aa18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 CCDC30Q5VVM6 783 aa18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 FAM43AQ8N2R8 423 aa18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 BCL11BQ9C0K0 894 aaPredicted RBP18.15■□□□□ 0.5
PITPNM1-216ENST00000534749 GNAI3P08754 354 aa18.14■□□□□ 0.49
PITPNM1-216ENST00000534749 TTC5Q8N0Z6 440 aa18.14■□□□□ 0.49
PITPNM1-216ENST00000534749 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
PITPNM1-216ENST00000534749 SYCP2Q9BX26 1530 aa18.14■□□□□ 0.49
PITPNM1-216ENST00000534749 SF3A1Q15459 793 aaKnown RBP18.14■□□□□ 0.49
PITPNM1-216ENST00000534749 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.49
PITPNM1-216ENST00000534749 TRAPPC8Q9Y2L5 1435 aa18.14■□□□□ 0.49
PITPNM1-216ENST00000534749 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
PITPNM1-216ENST00000534749 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
PITPNM1-216ENST00000534749 CD109Q6YHK3 1445 aa18.13■□□□□ 0.49
PITPNM1-216ENST00000534749 NINLQ9Y2I6 1382 aa18.13■□□□□ 0.49
PITPNM1-216ENST00000534749 RIC3Q7Z5B4 369 aa18.13■□□□□ 0.49
PITPNM1-216ENST00000534749 FBXW7Q969H0 707 aa18.13■□□□□ 0.49
PITPNM1-216ENST00000534749 FAM13BQ9NYF5 915 aa18.13■□□□□ 0.49
PITPNM1-216ENST00000534749 TEX14Q8IWB6 1497 aa18.13■□□□□ 0.49
PITPNM1-216ENST00000534749 RABEP1Q15276 862 aa18.12■□□□□ 0.49
PITPNM1-216ENST00000534749 FAM135AQ9P2D6 1515 aa18.12■□□□□ 0.49
PITPNM1-216ENST00000534749 FYB1O15117 783 aa18.12■□□□□ 0.49
PITPNM1-216ENST00000534749 GAS2L2Q8NHY3 880 aa18.12■□□□□ 0.49
PITPNM1-216ENST00000534749 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
PITPNM1-216ENST00000534749 NEUROD6Q96NK8 337 aa18.12■□□□□ 0.49
PITPNM1-216ENST00000534749 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
PITPNM1-216ENST00000534749 ATP6V1DQ9Y5K8 247 aa18.11■□□□□ 0.49
PITPNM1-216ENST00000534749 CLASRPQ8N2M8 674 aaKnown RBP18.11■□□□□ 0.49
PITPNM1-216ENST00000534749 HTATSF1O43719 755 aaKnown RBP18.11■□□□□ 0.49
PITPNM1-216ENST00000534749 CSPP1Q1MSJ5 1256 aa18.11■□□□□ 0.49
PITPNM1-216ENST00000534749 UPF3BQ9BZI7 483 aaKnown RBP18.11■□□□□ 0.49
PITPNM1-216ENST00000534749 SIL1Q9H173 461 aa18.1■□□□□ 0.49
PITPNM1-216ENST00000534749 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
PITPNM1-216ENST00000534749 FANCAO15360 1455 aa18.1■□□□□ 0.49
PITPNM1-216ENST00000534749 VSIG10Q8N0Z9 540 aa18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 RAPGEF4Q8WZA2 1011 aa18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 FIBPO43427 364 aa18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 TSHZ3Q63HK5 1081 aa18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 USHBP1Q8N6Y0 703 aa18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 GRPEL1Q9HAV7 217 aa18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 ERC2O15083 957 aa18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 ISY1Q9ULR0 285 aaKnown RBP18.09■□□□□ 0.49
PITPNM1-216ENST00000534749 DISP1Q96F81 1524 aa18.08■□□□□ 0.49
PITPNM1-216ENST00000534749 BICD2Q8TD16 824 aa18.08■□□□□ 0.49
PITPNM1-216ENST00000534749 LRRCC1Q9C099 1032 aa18.08■□□□□ 0.49
PITPNM1-216ENST00000534749 CREBRFQ8IUR6 639 aa18.08■□□□□ 0.48
PITPNM1-216ENST00000534749 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.48
PITPNM1-216ENST00000534749 KDM6BO15054 1643 aa18.07■□□□□ 0.48
PITPNM1-216ENST00000534749 SRGAP3O43295 1099 aa18.07■□□□□ 0.48
PITPNM1-216ENST00000534749 CEBPAP49715 358 aaPredicted RBP18.07■□□□□ 0.48
PITPNM1-216ENST00000534749 NUTM1Q86Y26 1132 aa18.07■□□□□ 0.48
PITPNM1-216ENST00000534749 KIAA0556O60303 1618 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms