RNA–Protein interactions for RNA: ENST00000534726.5

SNX19-213, Transcript of sorting nexin 19, humanhuman

TSL 1 (best) BASIC

Gene SNX19, Length 1,656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-213ENST00000534726 SSH2Q76I76 1423 aa18.96■□□□□ 0.63
SNX19-213ENST00000534726 PNPLA6Q8IY17 1366 aa18.96■□□□□ 0.63
SNX19-213ENST00000534726 PNNQ9H307 717 aaKnown RBP18.95■□□□□ 0.62
SNX19-213ENST00000534726 NALCNQ8IZF0 1738 aa18.95■□□□□ 0.62
SNX19-213ENST00000534726 DCCP43146 1447 aa18.95■□□□□ 0.62
SNX19-213ENST00000534726 TNNT2P45379 298 aaPredicted RBP18.95■□□□□ 0.62
SNX19-213ENST00000534726 DMRT2Q9Y5R5 561 aa18.94■□□□□ 0.62
SNX19-213ENST00000534726 NRKQ7Z2Y5 1582 aa18.94■□□□□ 0.62
SNX19-213ENST00000534726 C14orf37Q86TY3 774 aa18.93■□□□□ 0.62
SNX19-213ENST00000534726 GTF3C3Q9Y5Q9 886 aa18.93■□□□□ 0.62
SNX19-213ENST00000534726 USP31Q70CQ4 1352 aa18.92■□□□□ 0.62
SNX19-213ENST00000534726 SMG6Q86US8 1419 aaKnown RBP18.92■□□□□ 0.62
SNX19-213ENST00000534726 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
SNX19-213ENST00000534726 NUTM2FA1L443 756 aa18.9■□□□□ 0.62
SNX19-213ENST00000534726 NME9Q86XW9 330 aa18.9■□□□□ 0.62
SNX19-213ENST00000534726 HSPA2P54652 639 aa18.89■□□□□ 0.61
SNX19-213ENST00000534726 POLKQ9UBT6 870 aa18.89■□□□□ 0.61
SNX19-213ENST00000534726 OVOS2A0A0J9YW53 1432 aa18.89■□□□□ 0.61
SNX19-213ENST00000534726 OVOS2Q6IE36 1432 aa18.89■□□□□ 0.61
SNX19-213ENST00000534726 PMFBP1Q8TBY8 1022 aa18.89■□□□□ 0.61
SNX19-213ENST00000534726 RUNDC1Q96C34 613 aa18.89■□□□□ 0.61
SNX19-213ENST00000534726 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
SNX19-213ENST00000534726 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
SNX19-213ENST00000534726 SHPRHQ149N8 1683 aa18.87■□□□□ 0.61
SNX19-213ENST00000534726 LRRC7Q96NW7 1537 aa18.87■□□□□ 0.61
SNX19-213ENST00000534726 CDK12Q9NYV4 1490 aaPredicted RBP18.86■□□□□ 0.61
SNX19-213ENST00000534726 CADPS2Q86UW7 1296 aa18.86■□□□□ 0.61
SNX19-213ENST00000534726 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
SNX19-213ENST00000534726 NEFLP07196 543 aa18.85■□□□□ 0.61
SNX19-213ENST00000534726 ATF3P18847 181 aa18.85■□□□□ 0.61
SNX19-213ENST00000534726 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
SNX19-213ENST00000534726 COL3A1P02461 1466 aaPredicted RBP18.85■□□□□ 0.61
SNX19-213ENST00000534726 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
SNX19-213ENST00000534726 ESCO1Q5FWF5 840 aa18.84■□□□□ 0.61
SNX19-213ENST00000534726 TMEM94Q12767 1356 aa18.84■□□□□ 0.61
SNX19-213ENST00000534726 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
SNX19-213ENST00000534726 FCHSD2O94868 740 aa18.83■□□□□ 0.61
SNX19-213ENST00000534726 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.61
SNX19-213ENST00000534726 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.61
SNX19-213ENST00000534726 KIF1AQ12756 1690 aa18.83■□□□□ 0.6
SNX19-213ENST00000534726 PSME1Q06323 249 aa18.82■□□□□ 0.6
SNX19-213ENST00000534726 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
SNX19-213ENST00000534726 MSH6P52701 1360 aa18.82■□□□□ 0.6
SNX19-213ENST00000534726 ZNF521Q96K83 1311 aa18.81■□□□□ 0.6
SNX19-213ENST00000534726 NEFMP07197 916 aa18.81■□□□□ 0.6
SNX19-213ENST00000534726 ERICH6BQ5W0A0 696 aa18.81■□□□□ 0.6
SNX19-213ENST00000534726 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
SNX19-213ENST00000534726 APAF1O14727 1248 aa18.8■□□□□ 0.6
SNX19-213ENST00000534726 GOLGA2Q08379 1002 aa18.8■□□□□ 0.6
SNX19-213ENST00000534726 NLRP6P59044 892 aa18.79■□□□□ 0.6
SNX19-213ENST00000534726 ABTB2Q8N961 1025 aa18.79■□□□□ 0.6
SNX19-213ENST00000534726 STRCP1A6NGW2 1772 aa18.78■□□□□ 0.6
SNX19-213ENST00000534726 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
SNX19-213ENST00000534726 RBM33Q96EV2 1170 aaKnown RBP18.78■□□□□ 0.6
SNX19-213ENST00000534726 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
SNX19-213ENST00000534726 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.6
SNX19-213ENST00000534726 MST1RQ04912 1400 aa18.77■□□□□ 0.6
SNX19-213ENST00000534726 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
SNX19-213ENST00000534726 IL13P35225 146 aa18.76■□□□□ 0.59
SNX19-213ENST00000534726 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
SNX19-213ENST00000534726 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
SNX19-213ENST00000534726 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
SNX19-213ENST00000534726 MAPK8IP3Q9UPT6 1336 aa18.76■□□□□ 0.59
SNX19-213ENST00000534726 CCDC146Q8IYE0 955 aa18.76■□□□□ 0.59
SNX19-213ENST00000534726 TCP11L2Q8N4U5 519 aa18.76■□□□□ 0.59
SNX19-213ENST00000534726 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
SNX19-213ENST00000534726 SBNO1A3KN83 1393 aa18.75■□□□□ 0.59
SNX19-213ENST00000534726 E9PSI1 815 aa18.75■□□□□ 0.59
SNX19-213ENST00000534726 PAK3O75914 559 aaPredicted RBP18.75■□□□□ 0.59
SNX19-213ENST00000534726 PLEKHF1Q96S99 279 aa18.75■□□□□ 0.59
SNX19-213ENST00000534726 SUPT16HQ9Y5B9 1047 aaKnown RBP18.75■□□□□ 0.59
SNX19-213ENST00000534726 FLT4P35916 1363 aa18.74■□□□□ 0.59
SNX19-213ENST00000534726 IQSEC2Q5JU85 1478 aa18.74■□□□□ 0.59
SNX19-213ENST00000534726 ORAI2Q96SN7 254 aa18.73■□□□□ 0.59
SNX19-213ENST00000534726 SALL2Q9Y467 1007 aaPredicted RBP18.73■□□□□ 0.59
SNX19-213ENST00000534726 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
SNX19-213ENST00000534726 WWC1Q8IX03 1113 aa18.73■□□□□ 0.59
SNX19-213ENST00000534726 RNF123Q5XPI4 1314 aa18.72■□□□□ 0.59
SNX19-213ENST00000534726 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
SNX19-213ENST00000534726 FOXO3O43524 673 aa18.72■□□□□ 0.59
SNX19-213ENST00000534726 SLFN5Q08AF3 891 aa18.72■□□□□ 0.59
SNX19-213ENST00000534726 TRMT2AQ8IZ69 625 aaKnown RBP18.72■□□□□ 0.59
SNX19-213ENST00000534726 NPHP3Q7Z494 1330 aa18.71■□□□□ 0.59
SNX19-213ENST00000534726 KRT28Q7Z3Y7 464 aa18.71■□□□□ 0.59
SNX19-213ENST00000534726 MAP3K19Q56UN5 1328 aa18.7■□□□□ 0.58
SNX19-213ENST00000534726 AMPHP49418 695 aa18.69■□□□□ 0.58
SNX19-213ENST00000534726 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
SNX19-213ENST00000534726 FBLN1P23142 703 aa18.69■□□□□ 0.58
SNX19-213ENST00000534726 TMPOP42166 694 aaKnown RBP18.68■□□□□ 0.58
SNX19-213ENST00000534726 DUSP27Q5VZP5 1158 aa18.68■□□□□ 0.58
SNX19-213ENST00000534726 RCAN3Q9UKA8 241 aa18.68■□□□□ 0.58
SNX19-213ENST00000534726 IL16Q14005 1332 aa18.68■□□□□ 0.58
SNX19-213ENST00000534726 CALD1Q05682 793 aaKnown RBP18.67■□□□□ 0.58
SNX19-213ENST00000534726 CDCA7LQ96GN5 454 aa18.67■□□□□ 0.58
SNX19-213ENST00000534726 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
SNX19-213ENST00000534726 LMOD3Q0VAK6 560 aa18.66■□□□□ 0.58
SNX19-213ENST00000534726 EIF4A2Q14240 407 aaKnown RBP18.66■□□□□ 0.58
SNX19-213ENST00000534726 XIRP1Q702N8 1843 aaKnown RBP18.66■□□□□ 0.58
SNX19-213ENST00000534726 FKBP8Q14318 412 aa18.66■□□□□ 0.58
SNX19-213ENST00000534726 MYH16Q9H6N6 1097 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms