RNA–Protein interactions for RNA: ENST00000534479.5

DKK3-215, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 1,087 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-215ENST00000534479 BRD4O60885 1362 aaPredicted RBP27.37■■□□□ 1.97
DKK3-215ENST00000534479 LRRC59Q96AG4 307 aaKnown RBP27.37■■□□□ 1.97
DKK3-215ENST00000534479 SHPRHQ149N8 1683 aa27.36■■□□□ 1.97
DKK3-215ENST00000534479 TNS3Q68CZ2 1445 aa27.36■■□□□ 1.97
DKK3-215ENST00000534479 PAK3O75914 559 aaPredicted RBP27.36■■□□□ 1.97
DKK3-215ENST00000534479 EDC4Q6P2E9 1401 aaKnown RBP27.34■■□□□ 1.97
DKK3-215ENST00000534479 ZNF316A6NFI3 1004 aaPredicted RBP27.34■■□□□ 1.97
DKK3-215ENST00000534479 SPATA31A3Q5VYP0 1347 aa27.34■■□□□ 1.97
DKK3-215ENST00000534479 KIF20BQ96Q89 1820 aa27.34■■□□□ 1.97
DKK3-215ENST00000534479 SSH2Q76I76 1423 aa27.33■■□□□ 1.97
DKK3-215ENST00000534479 PIK3C2AO00443 1686 aa27.32■■□□□ 1.96
DKK3-215ENST00000534479 TTC21BQ7Z4L5 1316 aa27.32■■□□□ 1.96
DKK3-215ENST00000534479 LMOD2Q6P5Q4 547 aa27.31■■□□□ 1.96
DKK3-215ENST00000534479 PANK3Q9H999 370 aa27.31■■□□□ 1.96
DKK3-215ENST00000534479 COL22A1Q8NFW1 1626 aaPredicted RBP27.3■■□□□ 1.96
DKK3-215ENST00000534479 TTC21AQ8NDW8 1320 aa27.29■■□□□ 1.96
DKK3-215ENST00000534479 ARHGEF10O15013 1369 aa27.29■■□□□ 1.96
DKK3-215ENST00000534479 JCADQ9P266 1359 aa27.29■■□□□ 1.96
DKK3-215ENST00000534479 NSD3Q9BZ95 1437 aa27.29■■□□□ 1.96
DKK3-215ENST00000534479 PNPLA6Q8IY17 1366 aa27.28■■□□□ 1.96
DKK3-215ENST00000534479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.28■■□□□ 1.96
DKK3-215ENST00000534479 CARD14Q9BXL6 1004 aa27.27■■□□□ 1.96
DKK3-215ENST00000534479 ABCA3Q99758 1704 aa27.27■■□□□ 1.96
DKK3-215ENST00000534479 ABTB2Q8N961 1025 aa27.26■■□□□ 1.95
DKK3-215ENST00000534479 CRYBG1Q9Y4K1 1723 aa27.26■■□□□ 1.95
DKK3-215ENST00000534479 MARF1Q9Y4F3 1742 aaKnown RBP27.25■■□□□ 1.95
DKK3-215ENST00000534479 USP54Q70EL1 1684 aa27.25■■□□□ 1.95
DKK3-215ENST00000534479 PHRF1Q9P1Y6 1649 aaKnown RBP27.23■■□□□ 1.95
DKK3-215ENST00000534479 MED1Q15648 1581 aaPredicted RBP27.23■■□□□ 1.95
DKK3-215ENST00000534479 NUTM2GQ5VZR2 741 aa27.23■■□□□ 1.95
DKK3-215ENST00000534479 ANKRD26Q9UPS8 1709 aa27.22■■□□□ 1.95
DKK3-215ENST00000534479 NME9Q86XW9 330 aa27.21■■□□□ 1.95
DKK3-215ENST00000534479 NLRP6P59044 892 aa27.2■■□□□ 1.94
DKK3-215ENST00000534479 PLEKHG5O94827 1062 aa27.19■■□□□ 1.94
DKK3-215ENST00000534479 NLRP13Q86W25 1043 aa27.19■■□□□ 1.94
DKK3-215ENST00000534479 KNSTRNQ9Y448 316 aa27.19■■□□□ 1.94
DKK3-215ENST00000534479 CGNL1Q0VF96 1302 aa27.18■■□□□ 1.94
DKK3-215ENST00000534479 DDX10Q13206 875 aaKnown RBP27.18■■□□□ 1.94
DKK3-215ENST00000534479 USP31Q70CQ4 1352 aa27.17■■□□□ 1.94
DKK3-215ENST00000534479 SPATA31A6Q5VVP1 1343 aa27.16■■□□□ 1.94
DKK3-215ENST00000534479 ZRANB1Q9UGI0 708 aa27.16■■□□□ 1.94
DKK3-215ENST00000534479 FYB1O15117 783 aa27.15■■□□□ 1.94
DKK3-215ENST00000534479 CABLES1Q8TDN4 633 aa27.15■■□□□ 1.94
DKK3-215ENST00000534479 PER1O15534 1290 aaPredicted RBP27.14■■□□□ 1.94
DKK3-215ENST00000534479 GGNBP2Q9H3C7 697 aa27.14■■□□□ 1.94
DKK3-215ENST00000534479 SLIT3O75094 1523 aa27.14■■□□□ 1.94
DKK3-215ENST00000534479 OVOS2A0A0J9YW53 1432 aa27.14■■□□□ 1.93
DKK3-215ENST00000534479 OVOS2Q6IE36 1432 aa27.14■■□□□ 1.93
DKK3-215ENST00000534479 USP19O94966 1318 aa27.14■■□□□ 1.93
DKK3-215ENST00000534479 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
DKK3-215ENST00000534479 COG3Q96JB2 828 aa27.13■■□□□ 1.93
DKK3-215ENST00000534479 NUTM2BA6NNL0 878 aaPredicted RBP27.12■■□□□ 1.93
DKK3-215ENST00000534479 NUTM2EB1AL46 878 aaPredicted RBP27.12■■□□□ 1.93
DKK3-215ENST00000534479 NUTM2AQ8IVF1 878 aaPredicted RBP27.12■■□□□ 1.93
DKK3-215ENST00000534479 NSD2O96028 1365 aa27.1■■□□□ 1.93
DKK3-215ENST00000534479 LRP6O75581 1613 aa27.09■■□□□ 1.93
DKK3-215ENST00000534479 LTN1O94822 1766 aa27.08■■□□□ 1.93
DKK3-215ENST00000534479 AMER1Q5JTC6 1135 aaPredicted RBP27.08■■□□□ 1.93
DKK3-215ENST00000534479 NFAT5O94916 1531 aa27.06■■□□□ 1.92
DKK3-215ENST00000534479 GCP02774 474 aa27.05■■□□□ 1.92
DKK3-215ENST00000534479 KCNH5Q8NCM2 988 aa27.05■■□□□ 1.92
DKK3-215ENST00000534479 SOX12O15370 315 aa27.04■■□□□ 1.92
DKK3-215ENST00000534479 CC2D1BQ5T0F9 858 aaKnown RBP27.04■■□□□ 1.92
DKK3-215ENST00000534479 NPC1L1Q9UHC9 1359 aa27.04■■□□□ 1.92
DKK3-215ENST00000534479 ADAMTS2O95450 1211 aa27.03■■□□□ 1.92
DKK3-215ENST00000534479 MAP2P11137 1827 aaKnown RBP27.03■■□□□ 1.92
DKK3-215ENST00000534479 CNGB1Q14028 1251 aaPredicted RBP27.02■■□□□ 1.92
DKK3-215ENST00000534479 MEX3CQ5U5Q3 659 aaKnown RBP27.02■■□□□ 1.92
DKK3-215ENST00000534479 COL14A1Q05707 1796 aaKnown RBP27.01■■□□□ 1.91
DKK3-215ENST00000534479 PLCH1Q4KWH8 1693 aa27.01■■□□□ 1.91
DKK3-215ENST00000534479 ZC3H6P61129 1189 aaKnown RBP27■■□□□ 1.91
DKK3-215ENST00000534479 MORC1Q86VD1 984 aa27■■□□□ 1.91
DKK3-215ENST00000534479 KIAA0232Q92628 1395 aa26.98■■□□□ 1.91
DKK3-215ENST00000534479 CPDO75976 1380 aa26.97■■□□□ 1.91
DKK3-215ENST00000534479 RGPD5Q99666 1765 aa26.97■■□□□ 1.91
DKK3-215ENST00000534479 ZBTB7CA1YPR0 619 aa26.97■■□□□ 1.91
DKK3-215ENST00000534479 PRDM11Q9NQV5 511 aa26.96■■□□□ 1.91
DKK3-215ENST00000534479 COL18A1P39060 1754 aa26.96■■□□□ 1.91
DKK3-215ENST00000534479 TNNT2P45379 298 aaPredicted RBP26.95■■□□□ 1.9
DKK3-215ENST00000534479 NWD2Q9ULI1 1742 aa26.95■■□□□ 1.9
DKK3-215ENST00000534479 FBLN1P23142 703 aa26.94■■□□□ 1.9
DKK3-215ENST00000534479 C8orf37Q96NL8 207 aa26.94■■□□□ 1.9
DKK3-215ENST00000534479 LMO7Q8WWI1 1683 aa26.94■■□□□ 1.9
DKK3-215ENST00000534479 ARHGEF25Q86VW2 580 aa26.93■■□□□ 1.9
DKK3-215ENST00000534479 CHRNA2Q15822 529 aa26.92■■□□□ 1.9
DKK3-215ENST00000534479 AATKQ6ZMQ8 1374 aa26.92■■□□□ 1.9
DKK3-215ENST00000534479 ABCC6O95255 1503 aa26.91■■□□□ 1.9
DKK3-215ENST00000534479 PEAK1Q9H792 1746 aa26.91■■□□□ 1.9
DKK3-215ENST00000534479 FAM83GA6ND36 823 aa26.91■■□□□ 1.9
DKK3-215ENST00000534479 RRS1Q15050 365 aaKnown RBP26.91■■□□□ 1.9
DKK3-215ENST00000534479 NGLY1Q96IV0 654 aa26.91■■□□□ 1.9
DKK3-215ENST00000534479 NRAPQ86VF7 1730 aa26.9■■□□□ 1.9
DKK3-215ENST00000534479 MAP3K19Q56UN5 1328 aa26.9■■□□□ 1.9
DKK3-215ENST00000534479 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.88■■□□□ 1.89
DKK3-215ENST00000534479 SLIT2O94813 1529 aa26.87■■□□□ 1.89
DKK3-215ENST00000534479 PARD3Q8TEW0 1356 aa26.86■■□□□ 1.89
DKK3-215ENST00000534479 AMPHP49418 695 aa26.86■■□□□ 1.89
DKK3-215ENST00000534479 EMILIN1Q9Y6C2 1016 aa26.86■■□□□ 1.89
DKK3-215ENST00000534479 AFF2P51816 1311 aa26.86■■□□□ 1.89
DKK3-215ENST00000534479 CAMTA1Q9Y6Y1 1673 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms