RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 RALGAPBQ86X10 1494 aa19.21■□□□□ 0.67
CAPN1-228ENST00000534373 ONECUT3O60422 494 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-228ENST00000534373 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
CAPN1-228ENST00000534373 ABCA3Q99758 1704 aa19.2■□□□□ 0.66
CAPN1-228ENST00000534373 CCDC125Q86Z20 511 aa19.19■□□□□ 0.66
CAPN1-228ENST00000534373 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-228ENST00000534373 BTG4Q9NY30 223 aa19.17■□□□□ 0.66
CAPN1-228ENST00000534373 GLI3P10071 1580 aa19.17■□□□□ 0.66
CAPN1-228ENST00000534373 TOPAZ1Q8N9V7 1692 aa19.17■□□□□ 0.66
CAPN1-228ENST00000534373 BRD4O60885 1362 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-228ENST00000534373 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
CAPN1-228ENST00000534373 CABP2Q9NPB3 220 aa19.16■□□□□ 0.66
CAPN1-228ENST00000534373 CCDC9Q9Y3X0 531 aaKnown RBP19.16■□□□□ 0.66
CAPN1-228ENST00000534373 TRPM1Q7Z4N2 1603 aa19.15■□□□□ 0.66
CAPN1-228ENST00000534373 PLCH1Q4KWH8 1693 aa19.15■□□□□ 0.66
CAPN1-228ENST00000534373 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
CAPN1-228ENST00000534373 COL14A1Q05707 1796 aaKnown RBP19.14■□□□□ 0.66
CAPN1-228ENST00000534373 SEPT12Q8IYM1 358 aa19.14■□□□□ 0.65
CAPN1-228ENST00000534373 PRDM11Q9NQV5 511 aa19.14■□□□□ 0.65
CAPN1-228ENST00000534373 PPIP5K1Q6PFW1 1433 aa19.14■□□□□ 0.65
CAPN1-228ENST00000534373 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
CAPN1-228ENST00000534373 QRICH2Q9H0J4 1663 aa19.12■□□□□ 0.65
CAPN1-228ENST00000534373 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
CAPN1-228ENST00000534373 NLRP13Q86W25 1043 aa19.11■□□□□ 0.65
CAPN1-228ENST00000534373 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
CAPN1-228ENST00000534373 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
CAPN1-228ENST00000534373 EP400Q96L91 3159 aa19.09■□□□□ 0.65
CAPN1-228ENST00000534373 NUTM2GQ5VZR2 741 aa19.09■□□□□ 0.65
CAPN1-228ENST00000534373 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-228ENST00000534373 TONSLQ96HA7 1378 aa19.08■□□□□ 0.65
CAPN1-228ENST00000534373 USP19O94966 1318 aa19.08■□□□□ 0.65
CAPN1-228ENST00000534373 SPATA31A5Q5VU36 1347 aa19.08■□□□□ 0.65
CAPN1-228ENST00000534373 SPATA31A7Q8IWB4 1347 aa19.08■□□□□ 0.65
CAPN1-228ENST00000534373 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
CAPN1-228ENST00000534373 NRAPQ86VF7 1730 aa19.08■□□□□ 0.64
CAPN1-228ENST00000534373 ZC3H6P61129 1189 aaKnown RBP19.07■□□□□ 0.64
CAPN1-228ENST00000534373 CARD11Q9BXL7 1154 aa19.07■□□□□ 0.64
CAPN1-228ENST00000534373 CPDO75976 1380 aa19.06■□□□□ 0.64
CAPN1-228ENST00000534373 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
CAPN1-228ENST00000534373 GCP02774 474 aa19.06■□□□□ 0.64
CAPN1-228ENST00000534373 FAM98CQ17RN3 349 aaKnown RBP19.06■□□□□ 0.64
CAPN1-228ENST00000534373 USP6P35125 1406 aa19.06■□□□□ 0.64
CAPN1-228ENST00000534373 PHRF1Q9P1Y6 1649 aaKnown RBP19.05■□□□□ 0.64
CAPN1-228ENST00000534373 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
CAPN1-228ENST00000534373 BLMP54132 1417 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-228ENST00000534373 BRWD3Q6RI45 1802 aa19.04■□□□□ 0.64
CAPN1-228ENST00000534373 SSH2Q76I76 1423 aa19.03■□□□□ 0.64
CAPN1-228ENST00000534373 A0A0G2JS52 829 aa19.03■□□□□ 0.64
CAPN1-228ENST00000534373 EVA1CP58658 441 aa19.03■□□□□ 0.64
CAPN1-228ENST00000534373 NLRP6P59044 892 aa19.03■□□□□ 0.64
CAPN1-228ENST00000534373 MYT1Q01538 1121 aa19.03■□□□□ 0.64
CAPN1-228ENST00000534373 SPATA31A1Q5TZJ5 1347 aa19.02■□□□□ 0.64
CAPN1-228ENST00000534373 SF3B2Q13435 895 aaKnown RBP19.02■□□□□ 0.64
CAPN1-228ENST00000534373 STRN4Q9NRL3 753 aa19.01■□□□□ 0.63
CAPN1-228ENST00000534373 SLC24A1O60721 1099 aa19■□□□□ 0.63
CAPN1-228ENST00000534373 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
CAPN1-228ENST00000534373 NRKQ7Z2Y5 1582 aa19■□□□□ 0.63
CAPN1-228ENST00000534373 BARGINQ6ZT62 677 aa18.99■□□□□ 0.63
CAPN1-228ENST00000534373 ZRANB1Q9UGI0 708 aa18.99■□□□□ 0.63
CAPN1-228ENST00000534373 CPSF1Q10570 1443 aaKnown RBP18.99■□□□□ 0.63
CAPN1-228ENST00000534373 TTC21BQ7Z4L5 1316 aa18.99■□□□□ 0.63
CAPN1-228ENST00000534373 TTC21AQ8NDW8 1320 aa18.99■□□□□ 0.63
CAPN1-228ENST00000534373 KCNH5Q8NCM2 988 aa18.97■□□□□ 0.63
CAPN1-228ENST00000534373 THRAP3Q9Y2W1 955 aaKnown RBP18.97■□□□□ 0.63
CAPN1-228ENST00000534373 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
CAPN1-228ENST00000534373 SLIT3O75094 1523 aa18.95■□□□□ 0.62
CAPN1-228ENST00000534373 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
CAPN1-228ENST00000534373 LARP1Q6PKG0 1096 aaKnown RBP18.95■□□□□ 0.62
CAPN1-228ENST00000534373 TCP11L2Q8N4U5 519 aa18.95■□□□□ 0.62
CAPN1-228ENST00000534373 LMO7Q8WWI1 1683 aa18.95■□□□□ 0.62
CAPN1-228ENST00000534373 THSD7AQ9UPZ6 1657 aa18.95■□□□□ 0.62
CAPN1-228ENST00000534373 KTN1Q86UP2 1357 aaKnown RBP18.94■□□□□ 0.62
CAPN1-228ENST00000534373 DEFB132Q7Z7B7 95 aa18.93■□□□□ 0.62
CAPN1-228ENST00000534373 USP35Q9P2H5 1018 aa18.93■□□□□ 0.62
CAPN1-228ENST00000534373 AKAP12Q02952 1782 aa18.93■□□□□ 0.62
CAPN1-228ENST00000534373 BAG6P46379 1132 aa18.92■□□□□ 0.62
CAPN1-228ENST00000534373 FAM196AQ6ZSG2 479 aa18.92■□□□□ 0.62
CAPN1-228ENST00000534373 PIK3C2AO00443 1686 aa18.92■□□□□ 0.62
CAPN1-228ENST00000534373 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-228ENST00000534373 HDGFL2Q7Z4V5 671 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-228ENST00000534373 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
CAPN1-228ENST00000534373 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
CAPN1-228ENST00000534373 PDE3BQ13370 1112 aa18.9■□□□□ 0.62
CAPN1-228ENST00000534373 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
CAPN1-228ENST00000534373 TERF2IPQ9NYB0 399 aa18.9■□□□□ 0.62
CAPN1-228ENST00000534373 CRB1P82279 1406 aa18.9■□□□□ 0.62
CAPN1-228ENST00000534373 ST20-MTHFSA0A0A6YYL1 179 aa18.89■□□□□ 0.61
CAPN1-228ENST00000534373 TESK2Q96S53 571 aa18.89■□□□□ 0.61
CAPN1-228ENST00000534373 SLC12A5Q9H2X9 1139 aa18.89■□□□□ 0.61
CAPN1-228ENST00000534373 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
CAPN1-228ENST00000534373 ZBTB7CA1YPR0 619 aa18.88■□□□□ 0.61
CAPN1-228ENST00000534373 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-228ENST00000534373 FAM182BQ5T319 152 aa18.88■□□□□ 0.61
CAPN1-228ENST00000534373 CLSPNQ9HAW4 1339 aa18.88■□□□□ 0.61
CAPN1-228ENST00000534373 NINLQ9Y2I6 1382 aa18.87■□□□□ 0.61
CAPN1-228ENST00000534373 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
CAPN1-228ENST00000534373 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
CAPN1-228ENST00000534373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.86■□□□□ 0.61
CAPN1-228ENST00000534373 MON2Q7Z3U7 1717 aa18.86■□□□□ 0.61
CAPN1-228ENST00000534373 DISP2A7MBM2 1401 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms