RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 RIC3Q7Z5B4 369 aa9.58□□□□□ -0.88
CLNS1A-212ENST00000533957 SENP2Q9HC62 589 aa9.58□□□□□ -0.88
CLNS1A-212ENST00000533957 HRCP23327 699 aa9.57□□□□□ -0.88
CLNS1A-212ENST00000533957 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
CLNS1A-212ENST00000533957 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
CLNS1A-212ENST00000533957 WASF2Q9Y6W5 498 aa9.57□□□□□ -0.88
CLNS1A-212ENST00000533957 CFAP99D6REC4 459 aa9.56□□□□□ -0.88
CLNS1A-212ENST00000533957 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
CLNS1A-212ENST00000533957 WFS1O76024 890 aa9.55□□□□□ -0.88
CLNS1A-212ENST00000533957 PDE4DQ08499 809 aa9.55□□□□□ -0.88
CLNS1A-212ENST00000533957 PRPF38BQ5VTL8 546 aaKnown RBP9.55□□□□□ -0.88
CLNS1A-212ENST00000533957 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
CLNS1A-212ENST00000533957 ZBTB3Q9H5J0 574 aa9.55□□□□□ -0.88
CLNS1A-212ENST00000533957 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
CLNS1A-212ENST00000533957 VARSP26640 1264 aaKnown RBP9.54□□□□□ -0.88
CLNS1A-212ENST00000533957 CTHP32929 405 aa9.54□□□□□ -0.88
CLNS1A-212ENST00000533957 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
CLNS1A-212ENST00000533957 KIFC2Q96AC6 838 aa9.54□□□□□ -0.88
CLNS1A-212ENST00000533957 CABLES1Q8TDN4 633 aa9.53□□□□□ -0.88
CLNS1A-212ENST00000533957 CAPN5O15484 640 aaPredicted RBP9.52□□□□□ -0.89
CLNS1A-212ENST00000533957 MPNDQ8N594 471 aa9.52□□□□□ -0.89
CLNS1A-212ENST00000533957 SLC24A3Q9HC58 644 aa9.52□□□□□ -0.89
CLNS1A-212ENST00000533957 CSPP1Q1MSJ5 1256 aa9.51□□□□□ -0.89
CLNS1A-212ENST00000533957 MYSM1Q5VVJ2 828 aa9.51□□□□□ -0.89
CLNS1A-212ENST00000533957 LIMD1Q9UGP4 676 aa9.51□□□□□ -0.89
CLNS1A-212ENST00000533957 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
CLNS1A-212ENST00000533957 F12P00748 615 aaPredicted RBP9.5□□□□□ -0.89
CLNS1A-212ENST00000533957 TLL2Q9Y6L7 1015 aa9.5□□□□□ -0.89
CLNS1A-212ENST00000533957 TERTO14746 1132 aaKnown RBP9.49□□□□□ -0.89
CLNS1A-212ENST00000533957 PER1O15534 1290 aaPredicted RBP9.49□□□□□ -0.89
CLNS1A-212ENST00000533957 TUSC1Q2TAM9 212 aa9.49□□□□□ -0.89
CLNS1A-212ENST00000533957 TRIM46Q7Z4K8 759 aa9.49□□□□□ -0.89
CLNS1A-212ENST00000533957 MAP10Q9P2G4 905 aa9.49□□□□□ -0.89
CLNS1A-212ENST00000533957 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
CLNS1A-212ENST00000533957 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
CLNS1A-212ENST00000533957 QPCTQ16769 361 aa9.48□□□□□ -0.89
CLNS1A-212ENST00000533957 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
CLNS1A-212ENST00000533957 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
CLNS1A-212ENST00000533957 SMARCA4P51532 1647 aa9.48□□□□□ -0.89
CLNS1A-212ENST00000533957 LILRB3O75022 631 aa9.47□□□□□ -0.89
CLNS1A-212ENST00000533957 BMP1P13497 986 aa9.47□□□□□ -0.89
CLNS1A-212ENST00000533957 FOXJ1Q92949 421 aa9.47□□□□□ -0.89
CLNS1A-212ENST00000533957 NNTQ13423 1086 aa9.46□□□□□ -0.9
CLNS1A-212ENST00000533957 FAM174AQ8TBP5 190 aa9.46□□□□□ -0.9
CLNS1A-212ENST00000533957 TSC1Q92574 1164 aa9.46□□□□□ -0.9
CLNS1A-212ENST00000533957 CDK15Q96Q40 435 aa9.45□□□□□ -0.9
CLNS1A-212ENST00000533957 WIPF1O43516 503 aa9.44□□□□□ -0.9
CLNS1A-212ENST00000533957 RTL5Q5HYW3 569 aaPredicted RBP9.44□□□□□ -0.9
CLNS1A-212ENST00000533957 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
CLNS1A-212ENST00000533957 BAZ1AQ9NRL2 1556 aaPredicted RBP9.43□□□□□ -0.9
CLNS1A-212ENST00000533957 KLF16Q9BXK1 252 aaPredicted RBP9.43□□□□□ -0.9
CLNS1A-212ENST00000533957 RSPH6AQ9H0K4 717 aa9.43□□□□□ -0.9
CLNS1A-212ENST00000533957 ADH1CP00326 375 aa9.42□□□□□ -0.9
CLNS1A-212ENST00000533957 ARID5BQ14865 1188 aa9.42□□□□□ -0.9
CLNS1A-212ENST00000533957 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
CLNS1A-212ENST00000533957 ZFP42Q96MM3 310 aa9.42□□□□□ -0.9
CLNS1A-212ENST00000533957 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
CLNS1A-212ENST00000533957 TIMP2P16035 220 aa9.41□□□□□ -0.9
CLNS1A-212ENST00000533957 WDR4P57081 412 aaKnown RBP9.41□□□□□ -0.9
CLNS1A-212ENST00000533957 AGERQ15109 404 aa9.41□□□□□ -0.9
CLNS1A-212ENST00000533957 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
CLNS1A-212ENST00000533957 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
CLNS1A-212ENST00000533957 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
CLNS1A-212ENST00000533957 GRM5P41594 1212 aa9.4□□□□□ -0.9
CLNS1A-212ENST00000533957 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
CLNS1A-212ENST00000533957 ARMC2Q8NEN0 867 aa9.4□□□□□ -0.9
CLNS1A-212ENST00000533957 PEG3Q9GZU2 1588 aa9.4□□□□□ -0.9
CLNS1A-212ENST00000533957 MRPL14Q6P1L8 145 aaKnown RBP9.39□□□□□ -0.91
CLNS1A-212ENST00000533957 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
CLNS1A-212ENST00000533957 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
CLNS1A-212ENST00000533957 NR5A1Q13285 461 aa9.38□□□□□ -0.91
CLNS1A-212ENST00000533957 SLC16A10Q8TF71 515 aa9.38□□□□□ -0.91
CLNS1A-212ENST00000533957 SCARF1Q14162 830 aa9.37□□□□□ -0.91
CLNS1A-212ENST00000533957 SH3RF1Q7Z6J0 888 aa9.37□□□□□ -0.91
CLNS1A-212ENST00000533957 NPAS3Q8IXF0 933 aa9.37□□□□□ -0.91
CLNS1A-212ENST00000533957 SMARCA2P51531 1590 aa9.37□□□□□ -0.91
CLNS1A-212ENST00000533957 HMGXB3Q12766 1538 aa9.36□□□□□ -0.91
CLNS1A-212ENST00000533957 ZIC2O95409 532 aaPredicted RBP9.36□□□□□ -0.91
CLNS1A-212ENST00000533957 NR3C2P08235 984 aa9.36□□□□□ -0.91
CLNS1A-212ENST00000533957 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
CLNS1A-212ENST00000533957 ITPKCQ96DU7 683 aa9.36□□□□□ -0.91
CLNS1A-212ENST00000533957 PURBQ96QR8 312 aaKnown RBP9.36□□□□□ -0.91
CLNS1A-212ENST00000533957 MROH2BQ7Z745 1585 aa9.35□□□□□ -0.91
CLNS1A-212ENST00000533957 C1QTNF2Q9BXJ5 285 aa9.35□□□□□ -0.91
CLNS1A-212ENST00000533957 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
CLNS1A-212ENST00000533957 NBPF14Q5TI25 921 aa9.34□□□□□ -0.91
CLNS1A-212ENST00000533957 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
CLNS1A-212ENST00000533957 STK17AQ9UEE5 414 aa9.34□□□□□ -0.91
CLNS1A-212ENST00000533957 VEGFBP49765 207 aa9.33□□□□□ -0.92
CLNS1A-212ENST00000533957 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
CLNS1A-212ENST00000533957 IRF7Q92985 503 aa9.32□□□□□ -0.92
CLNS1A-212ENST00000533957 ATAD2BQ9ULI0 1458 aa9.32□□□□□ -0.92
CLNS1A-212ENST00000533957 MAGEB6P1A0A0J9YX57 407 aa9.31□□□□□ -0.92
CLNS1A-212ENST00000533957 H3BM21 787 aa9.31□□□□□ -0.92
CLNS1A-212ENST00000533957 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
CLNS1A-212ENST00000533957 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
CLNS1A-212ENST00000533957 GPKOWQ92917 476 aaPredicted RBP eCLIP9.31□□□□□ -0.92
CLNS1A-212ENST00000533957 MAP4K5Q9Y4K4 846 aa9.31□□□□□ -0.92
CLNS1A-212ENST00000533957 WIZO95785 1651 aa9.31□□□□□ -0.92
CLNS1A-212ENST00000533957 NCAPD3P42695 1498 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms