RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 TRPM3Q9HCF6 1732 aaPredicted RBP18.79■□□□□ 0.6
CAPN1-227ENST00000533909 USP21Q9UK80 565 aa18.78■□□□□ 0.6
CAPN1-227ENST00000533909 ABTB2Q8N961 1025 aa18.77■□□□□ 0.6
CAPN1-227ENST00000533909 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
CAPN1-227ENST00000533909 QTRT2Q9H974 415 aaKnown RBP18.76■□□□□ 0.59
CAPN1-227ENST00000533909 ALS2Q96Q42 1657 aa18.76■□□□□ 0.59
CAPN1-227ENST00000533909 RXRBP28702 533 aa18.75■□□□□ 0.59
CAPN1-227ENST00000533909 TMF1P82094 1093 aa18.75■□□□□ 0.59
CAPN1-227ENST00000533909 ZNF692Q9BU19 519 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-227ENST00000533909 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-227ENST00000533909 TESK2Q96S53 571 aa18.74■□□□□ 0.59
CAPN1-227ENST00000533909 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
CAPN1-227ENST00000533909 USP6P35125 1406 aa18.74■□□□□ 0.59
CAPN1-227ENST00000533909 SOCS7O14512 581 aa18.73■□□□□ 0.59
CAPN1-227ENST00000533909 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-227ENST00000533909 FNBP4Q8N3X1 1017 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-227ENST00000533909 TRPC5Q9UL62 973 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-227ENST00000533909 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
CAPN1-227ENST00000533909 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
CAPN1-227ENST00000533909 PUS7Q96PZ0 661 aaKnown RBP18.72■□□□□ 0.59
CAPN1-227ENST00000533909 NLRP13Q86W25 1043 aa18.71■□□□□ 0.59
CAPN1-227ENST00000533909 TERF2IPQ9NYB0 399 aa18.71■□□□□ 0.59
CAPN1-227ENST00000533909 ABCA3Q99758 1704 aa18.71■□□□□ 0.59
CAPN1-227ENST00000533909 RBM6P78332 1123 aaKnown RBP18.7■□□□□ 0.58
CAPN1-227ENST00000533909 PRDM11Q9NQV5 511 aa18.7■□□□□ 0.58
CAPN1-227ENST00000533909 NLRP6P59044 892 aa18.69■□□□□ 0.58
CAPN1-227ENST00000533909 EIF4G2P78344 907 aaKnown RBP eCLIP18.68■□□□□ 0.58
CAPN1-227ENST00000533909 UNC5CLQ8IV45 518 aa18.68■□□□□ 0.58
CAPN1-227ENST00000533909 SLC12A5Q9H2X9 1139 aa18.68■□□□□ 0.58
CAPN1-227ENST00000533909 NINLQ9Y2I6 1382 aa18.68■□□□□ 0.58
CAPN1-227ENST00000533909 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
CAPN1-227ENST00000533909 TTC21BQ7Z4L5 1316 aa18.67■□□□□ 0.58
CAPN1-227ENST00000533909 TTC21AQ8NDW8 1320 aa18.67■□□□□ 0.58
CAPN1-227ENST00000533909 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
CAPN1-227ENST00000533909 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
CAPN1-227ENST00000533909 ZC3H6P61129 1189 aaKnown RBP18.66■□□□□ 0.58
CAPN1-227ENST00000533909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
CAPN1-227ENST00000533909 AKAP12Q02952 1782 aa18.65■□□□□ 0.58
CAPN1-227ENST00000533909 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
CAPN1-227ENST00000533909 SLIT2O94813 1529 aa18.65■□□□□ 0.58
CAPN1-227ENST00000533909 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
CAPN1-227ENST00000533909 KIAA0232Q92628 1395 aa18.65■□□□□ 0.58
CAPN1-227ENST00000533909 ATRNO75882 1429 aa18.65■□□□□ 0.58
CAPN1-227ENST00000533909 ZBTB7CA1YPR0 619 aa18.64■□□□□ 0.57
CAPN1-227ENST00000533909 USP19O94966 1318 aa18.64■□□□□ 0.57
CAPN1-227ENST00000533909 PHRF1Q9P1Y6 1649 aaKnown RBP18.63■□□□□ 0.57
CAPN1-227ENST00000533909 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
CAPN1-227ENST00000533909 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
CAPN1-227ENST00000533909 POLR3GLQ9BT43 218 aa18.63■□□□□ 0.57
CAPN1-227ENST00000533909 SSH2Q76I76 1423 aa18.63■□□□□ 0.57
CAPN1-227ENST00000533909 CRYBG1Q9Y4K1 1723 aa18.63■□□□□ 0.57
CAPN1-227ENST00000533909 GCP02774 474 aa18.62■□□□□ 0.57
CAPN1-227ENST00000533909 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
CAPN1-227ENST00000533909 CHRNA2Q15822 529 aa18.62■□□□□ 0.57
CAPN1-227ENST00000533909 GJD4Q96KN9 370 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-227ENST00000533909 A0A1W2PP64 1363 aa18.62■□□□□ 0.57
CAPN1-227ENST00000533909 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-227ENST00000533909 NWD2Q9ULI1 1742 aa18.62■□□□□ 0.57
CAPN1-227ENST00000533909 MON2Q7Z3U7 1717 aa18.61■□□□□ 0.57
CAPN1-227ENST00000533909 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.61■□□□□ 0.57
CAPN1-227ENST00000533909 EDC4Q6P2E9 1401 aaKnown RBP18.61■□□□□ 0.57
CAPN1-227ENST00000533909 VPS72Q15906 364 aa18.61■□□□□ 0.57
CAPN1-227ENST00000533909 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
CAPN1-227ENST00000533909 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
CAPN1-227ENST00000533909 CD163L1Q9NR16 1453 aa18.6■□□□□ 0.57
CAPN1-227ENST00000533909 SOX12O15370 315 aa18.6■□□□□ 0.57
CAPN1-227ENST00000533909 KCNH5Q8NCM2 988 aa18.6■□□□□ 0.57
CAPN1-227ENST00000533909 EVA1CP58658 441 aa18.59■□□□□ 0.57
CAPN1-227ENST00000533909 CPDO75976 1380 aa18.58■□□□□ 0.57
CAPN1-227ENST00000533909 A0A0G2JS52 829 aa18.58■□□□□ 0.56
CAPN1-227ENST00000533909 MYT1Q01538 1121 aa18.58■□□□□ 0.56
CAPN1-227ENST00000533909 NME9Q86XW9 330 aa18.58■□□□□ 0.56
CAPN1-227ENST00000533909 STRN4Q9NRL3 753 aa18.58■□□□□ 0.56
CAPN1-227ENST00000533909 RGS12O14924 1447 aa18.57■□□□□ 0.56
CAPN1-227ENST00000533909 ANKRD36BQ8N2N9 1353 aa18.57■□□□□ 0.56
CAPN1-227ENST00000533909 SLIT3O75094 1523 aa18.55■□□□□ 0.56
CAPN1-227ENST00000533909 COG3Q96JB2 828 aa18.53■□□□□ 0.56
CAPN1-227ENST00000533909 ZRANB1Q9UGI0 708 aa18.53■□□□□ 0.56
CAPN1-227ENST00000533909 USP31Q70CQ4 1352 aa18.53■□□□□ 0.56
CAPN1-227ENST00000533909 NRAPQ86VF7 1730 aa18.52■□□□□ 0.56
CAPN1-227ENST00000533909 GLI3P10071 1580 aa18.51■□□□□ 0.55
CAPN1-227ENST00000533909 AATKQ6ZMQ8 1374 aa18.51■□□□□ 0.55
CAPN1-227ENST00000533909 SPATA31A5Q5VU36 1347 aa18.5■□□□□ 0.55
CAPN1-227ENST00000533909 SPATA31A7Q8IWB4 1347 aa18.5■□□□□ 0.55
CAPN1-227ENST00000533909 FAM98CQ17RN3 349 aaKnown RBP18.5■□□□□ 0.55
CAPN1-227ENST00000533909 SEPT12Q8IYM1 358 aa18.5■□□□□ 0.55
CAPN1-227ENST00000533909 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
CAPN1-227ENST00000533909 ARHGEF25Q86VW2 580 aa18.49■□□□□ 0.55
CAPN1-227ENST00000533909 CAMTA1Q9Y6Y1 1673 aa18.48■□□□□ 0.55
CAPN1-227ENST00000533909 CSB-PGBD3P0DP91 1061 aa18.48■□□□□ 0.55
CAPN1-227ENST00000533909 LARP1Q6PKG0 1096 aaKnown RBP18.47■□□□□ 0.55
CAPN1-227ENST00000533909 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
CAPN1-227ENST00000533909 MYOM1P52179 1685 aa18.47■□□□□ 0.55
CAPN1-227ENST00000533909 SPATA31A1Q5TZJ5 1347 aa18.47■□□□□ 0.55
CAPN1-227ENST00000533909 NFAT5O94916 1531 aa18.46■□□□□ 0.55
CAPN1-227ENST00000533909 TOM1L2Q6ZVM7 507 aa18.46■□□□□ 0.55
CAPN1-227ENST00000533909 GGNBP2Q9H3C7 697 aa18.46■□□□□ 0.55
CAPN1-227ENST00000533909 LMO7Q8WWI1 1683 aa18.46■□□□□ 0.55
CAPN1-227ENST00000533909 OVOS2A0A0J9YW53 1432 aa18.46■□□□□ 0.55
CAPN1-227ENST00000533909 OVOS2Q6IE36 1432 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms