RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 KTN1Q86UP2 1357 aaKnown RBP27.56■■■□□ 2
CHEK1-215ENST00000533778 MED1Q15648 1581 aaPredicted RBP27.56■■■□□ 2
CHEK1-215ENST00000533778 HAP1P54257 671 aaPredicted RBP27.55■■■□□ 2
CHEK1-215ENST00000533778 ABTB2Q8N961 1025 aa27.55■■■□□ 2
CHEK1-215ENST00000533778 PHF23Q9BUL5 403 aaPredicted RBP27.55■■■□□ 2
CHEK1-215ENST00000533778 COL22A1Q8NFW1 1626 aaPredicted RBP27.54■■■□□ 2
CHEK1-215ENST00000533778 TRPM3Q9HCF6 1732 aaPredicted RBP27.53■■■□□ 2
CHEK1-215ENST00000533778 TTC21AQ8NDW8 1320 aa27.52■■■□□ 2
CHEK1-215ENST00000533778 ADAMTS2O95450 1211 aa27.51■■□□□ 1.99
CHEK1-215ENST00000533778 POLR3GLQ9BT43 218 aa27.51■■□□□ 1.99
CHEK1-215ENST00000533778 LRP6O75581 1613 aa27.51■■□□□ 1.99
CHEK1-215ENST00000533778 SSH2Q76I76 1423 aa27.5■■□□□ 1.99
CHEK1-215ENST00000533778 TTC21BQ7Z4L5 1316 aa27.5■■□□□ 1.99
CHEK1-215ENST00000533778 NLRP13Q86W25 1043 aa27.5■■□□□ 1.99
CHEK1-215ENST00000533778 CD163L1Q9NR16 1453 aa27.49■■□□□ 1.99
CHEK1-215ENST00000533778 A0A1W2PP64 1363 aa27.48■■□□□ 1.99
CHEK1-215ENST00000533778 ANKRD36BQ8N2N9 1353 aa27.48■■□□□ 1.99
CHEK1-215ENST00000533778 PLEKHG5O94827 1062 aa27.48■■□□□ 1.99
CHEK1-215ENST00000533778 CABLES1Q8TDN4 633 aa27.48■■□□□ 1.99
CHEK1-215ENST00000533778 ALS2Q96Q42 1657 aa27.46■■□□□ 1.99
CHEK1-215ENST00000533778 NLRP6P59044 892 aa27.46■■□□□ 1.99
CHEK1-215ENST00000533778 NUTM2GQ5VZR2 741 aa27.46■■□□□ 1.99
CHEK1-215ENST00000533778 C8orf37Q96NL8 207 aa27.46■■□□□ 1.99
CHEK1-215ENST00000533778 EDC4Q6P2E9 1401 aaKnown RBP27.46■■□□□ 1.99
CHEK1-215ENST00000533778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.44■■□□□ 1.98
CHEK1-215ENST00000533778 NGLY1Q96IV0 654 aa27.44■■□□□ 1.98
CHEK1-215ENST00000533778 C11orf95C9JLR9 678 aaPredicted RBP27.43■■□□□ 1.98
CHEK1-215ENST00000533778 AKAP12Q02952 1782 aa27.42■■□□□ 1.98
CHEK1-215ENST00000533778 ZNF772Q68DY9 489 aaPredicted RBP27.41■■□□□ 1.98
CHEK1-215ENST00000533778 USP19O94966 1318 aa27.41■■□□□ 1.98
CHEK1-215ENST00000533778 KIF7Q2M1P5 1343 aa27.39■■□□□ 1.97
CHEK1-215ENST00000533778 MON2Q7Z3U7 1717 aa27.38■■□□□ 1.97
CHEK1-215ENST00000533778 AFF2P51816 1311 aa27.38■■□□□ 1.97
CHEK1-215ENST00000533778 GCP02774 474 aa27.37■■□□□ 1.97
CHEK1-215ENST00000533778 FNBP4Q8N3X1 1017 aaPredicted RBP27.37■■□□□ 1.97
CHEK1-215ENST00000533778 KCNH5Q8NCM2 988 aa27.37■■□□□ 1.97
CHEK1-215ENST00000533778 USP31Q70CQ4 1352 aa27.36■■□□□ 1.97
CHEK1-215ENST00000533778 NME9Q86XW9 330 aa27.36■■□□□ 1.97
CHEK1-215ENST00000533778 RGS17Q9UGC6 210 aaPredicted RBP27.35■■□□□ 1.97
CHEK1-215ENST00000533778 NRKQ7Z2Y5 1582 aa27.35■■□□□ 1.97
CHEK1-215ENST00000533778 FAM83GA6ND36 823 aa27.33■■□□□ 1.97
CHEK1-215ENST00000533778 PRDM11Q9NQV5 511 aa27.33■■□□□ 1.97
CHEK1-215ENST00000533778 USP21Q9UK80 565 aa27.33■■□□□ 1.97
CHEK1-215ENST00000533778 CARD14Q9BXL6 1004 aa27.32■■□□□ 1.96
CHEK1-215ENST00000533778 PANK3Q9H999 370 aa27.32■■□□□ 1.96
CHEK1-215ENST00000533778 ZC3H6P61129 1189 aaKnown RBP27.31■■□□□ 1.96
CHEK1-215ENST00000533778 PIK3C2AO00443 1686 aa27.3■■□□□ 1.96
CHEK1-215ENST00000533778 COG3Q96JB2 828 aa27.3■■□□□ 1.96
CHEK1-215ENST00000533778 CPDO75976 1380 aa27.3■■□□□ 1.96
CHEK1-215ENST00000533778 KIAA0232Q92628 1395 aa27.3■■□□□ 1.96
CHEK1-215ENST00000533778 CCDC7Q96M83 1385 aa27.3■■□□□ 1.96
CHEK1-215ENST00000533778 ZRANB1Q9UGI0 708 aa27.29■■□□□ 1.96
CHEK1-215ENST00000533778 NSD3Q9BZ95 1437 aa27.29■■□□□ 1.96
CHEK1-215ENST00000533778 MYOM1P52179 1685 aa27.29■■□□□ 1.96
CHEK1-215ENST00000533778 ABCA3Q99758 1704 aa27.28■■□□□ 1.96
CHEK1-215ENST00000533778 WASHC2AQ641Q2 1341 aa27.28■■□□□ 1.96
CHEK1-215ENST00000533778 FYB1O15117 783 aa27.28■■□□□ 1.96
CHEK1-215ENST00000533778 SLIT3O75094 1523 aa27.27■■□□□ 1.96
CHEK1-215ENST00000533778 CGNL1Q0VF96 1302 aa27.27■■□□□ 1.96
CHEK1-215ENST00000533778 UNC5CLQ8IV45 518 aa27.27■■□□□ 1.96
CHEK1-215ENST00000533778 TRPC5Q9UL62 973 aaPredicted RBP27.27■■□□□ 1.96
CHEK1-215ENST00000533778 QTRT2Q9H974 415 aaKnown RBP27.26■■□□□ 1.95
CHEK1-215ENST00000533778 SLIT2O94813 1529 aa27.26■■□□□ 1.95
CHEK1-215ENST00000533778 CRYBG1Q9Y4K1 1723 aa27.25■■□□□ 1.95
CHEK1-215ENST00000533778 POTEAQ6S8J7 498 aa27.25■■□□□ 1.95
CHEK1-215ENST00000533778 PHRF1Q9P1Y6 1649 aaKnown RBP27.25■■□□□ 1.95
CHEK1-215ENST00000533778 SOX12O15370 315 aa27.24■■□□□ 1.95
CHEK1-215ENST00000533778 BTG4Q9NY30 223 aa27.24■■□□□ 1.95
CHEK1-215ENST00000533778 MARF1Q9Y4F3 1742 aaKnown RBP27.24■■□□□ 1.95
CHEK1-215ENST00000533778 OVOS2A0A0J9YW53 1432 aa27.24■■□□□ 1.95
CHEK1-215ENST00000533778 OVOS2Q6IE36 1432 aa27.24■■□□□ 1.95
CHEK1-215ENST00000533778 CHRNA2Q15822 529 aa27.23■■□□□ 1.95
CHEK1-215ENST00000533778 GGNBP2Q9H3C7 697 aa27.23■■□□□ 1.95
CHEK1-215ENST00000533778 BCL9LQ86UU0 1499 aa27.23■■□□□ 1.95
CHEK1-215ENST00000533778 KNSTRNQ9Y448 316 aa27.22■■□□□ 1.95
CHEK1-215ENST00000533778 ZBTB7CA1YPR0 619 aa27.21■■□□□ 1.95
CHEK1-215ENST00000533778 ARHGEF25Q86VW2 580 aa27.21■■□□□ 1.95
CHEK1-215ENST00000533778 RXRBP28702 533 aa27.2■■□□□ 1.94
CHEK1-215ENST00000533778 AATKQ6ZMQ8 1374 aa27.2■■□□□ 1.94
CHEK1-215ENST00000533778 COL14A1Q05707 1796 aaKnown RBP27.2■■□□□ 1.94
CHEK1-215ENST00000533778 EVA1CP58658 441 aa27.18■■□□□ 1.94
CHEK1-215ENST00000533778 RBM6P78332 1123 aaKnown RBP27.18■■□□□ 1.94
CHEK1-215ENST00000533778 USP54Q70EL1 1684 aa27.17■■□□□ 1.94
CHEK1-215ENST00000533778 VPS72Q15906 364 aa27.17■■□□□ 1.94
CHEK1-215ENST00000533778 ATRNO75882 1429 aa27.16■■□□□ 1.94
CHEK1-215ENST00000533778 NSD2O96028 1365 aa27.15■■□□□ 1.94
CHEK1-215ENST00000533778 GJD4Q96KN9 370 aaPredicted RBP27.15■■□□□ 1.94
CHEK1-215ENST00000533778 NFAT5O94916 1531 aa27.15■■□□□ 1.94
CHEK1-215ENST00000533778 CCDC9Q9Y3X0 531 aaKnown RBP27.14■■□□□ 1.94
CHEK1-215ENST00000533778 NWD2Q9ULI1 1742 aa27.13■■□□□ 1.93
CHEK1-215ENST00000533778 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
CHEK1-215ENST00000533778 PLCH1Q4KWH8 1693 aa27.11■■□□□ 1.93
CHEK1-215ENST00000533778 PER1O15534 1290 aaPredicted RBP27.1■■□□□ 1.93
CHEK1-215ENST00000533778 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.09■■□□□ 1.93
CHEK1-215ENST00000533778 CAMTA1Q9Y6Y1 1673 aa27.08■■□□□ 1.93
CHEK1-215ENST00000533778 ILDR2Q71H61 639 aa27.08■■□□□ 1.93
CHEK1-215ENST00000533778 AXIN2Q9Y2T1 843 aa27.08■■□□□ 1.93
CHEK1-215ENST00000533778 ABCC6O95255 1503 aa27.07■■□□□ 1.92
CHEK1-215ENST00000533778 AMPHP49418 695 aa27.07■■□□□ 1.92
CHEK1-215ENST00000533778 AMER1Q5JTC6 1135 aaPredicted RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms