RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 TRPM3Q9HCF6 1732 aaPredicted RBP22.8■■□□□ 1.24
PACSIN3-210ENST00000533686 PAK3O75914 559 aaPredicted RBP22.8■■□□□ 1.24
PACSIN3-210ENST00000533686 SPATA31A6Q5VVP1 1343 aa22.79■■□□□ 1.24
PACSIN3-210ENST00000533686 AKAP12Q02952 1782 aa22.78■■□□□ 1.24
PACSIN3-210ENST00000533686 CCDC7Q96M83 1385 aa22.78■■□□□ 1.24
PACSIN3-210ENST00000533686 SHPRHQ149N8 1683 aa22.78■■□□□ 1.24
PACSIN3-210ENST00000533686 WASHC2AQ641Q2 1341 aa22.78■■□□□ 1.24
PACSIN3-210ENST00000533686 TTC21BQ7Z4L5 1316 aa22.78■■□□□ 1.24
PACSIN3-210ENST00000533686 TTC21AQ8NDW8 1320 aa22.78■■□□□ 1.24
PACSIN3-210ENST00000533686 EDC4Q6P2E9 1401 aaKnown RBP22.76■■□□□ 1.23
PACSIN3-210ENST00000533686 LMOD2Q6P5Q4 547 aa22.76■■□□□ 1.23
PACSIN3-210ENST00000533686 MYOM1P52179 1685 aa22.76■■□□□ 1.23
PACSIN3-210ENST00000533686 ABTB2Q8N961 1025 aa22.75■■□□□ 1.23
PACSIN3-210ENST00000533686 ALS2Q96Q42 1657 aa22.74■■□□□ 1.23
PACSIN3-210ENST00000533686 MON2Q7Z3U7 1717 aa22.74■■□□□ 1.23
PACSIN3-210ENST00000533686 COL22A1Q8NFW1 1626 aaPredicted RBP22.74■■□□□ 1.23
PACSIN3-210ENST00000533686 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
PACSIN3-210ENST00000533686 NLRP13Q86W25 1043 aa22.71■■□□□ 1.23
PACSIN3-210ENST00000533686 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
PACSIN3-210ENST00000533686 PANK3Q9H999 370 aa22.71■■□□□ 1.23
PACSIN3-210ENST00000533686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.7■■□□□ 1.22
PACSIN3-210ENST00000533686 MED1Q15648 1581 aaPredicted RBP22.68■■□□□ 1.22
PACSIN3-210ENST00000533686 USP31Q70CQ4 1352 aa22.68■■□□□ 1.22
PACSIN3-210ENST00000533686 NLRP6P59044 892 aa22.68■■□□□ 1.22
PACSIN3-210ENST00000533686 USP19O94966 1318 aa22.67■■□□□ 1.22
PACSIN3-210ENST00000533686 NUTM2BA6NNL0 878 aaPredicted RBP22.67■■□□□ 1.22
PACSIN3-210ENST00000533686 NUTM2EB1AL46 878 aaPredicted RBP22.67■■□□□ 1.22
PACSIN3-210ENST00000533686 NUTM2GQ5VZR2 741 aa22.67■■□□□ 1.22
PACSIN3-210ENST00000533686 NUTM2AQ8IVF1 878 aaPredicted RBP22.67■■□□□ 1.22
PACSIN3-210ENST00000533686 NSD3Q9BZ95 1437 aa22.66■■□□□ 1.22
PACSIN3-210ENST00000533686 NME9Q86XW9 330 aa22.66■■□□□ 1.22
PACSIN3-210ENST00000533686 CABLES1Q8TDN4 633 aa22.66■■□□□ 1.22
PACSIN3-210ENST00000533686 PIK3C2AO00443 1686 aa22.65■■□□□ 1.22
PACSIN3-210ENST00000533686 LRP6O75581 1613 aa22.64■■□□□ 1.22
PACSIN3-210ENST00000533686 HAP1P54257 671 aaPredicted RBP22.64■■□□□ 1.21
PACSIN3-210ENST00000533686 FYB1O15117 783 aa22.63■■□□□ 1.21
PACSIN3-210ENST00000533686 CGNL1Q0VF96 1302 aa22.62■■□□□ 1.21
PACSIN3-210ENST00000533686 PLEKHG5O94827 1062 aa22.61■■□□□ 1.21
PACSIN3-210ENST00000533686 GCP02774 474 aa22.61■■□□□ 1.21
PACSIN3-210ENST00000533686 ZRANB1Q9UGI0 708 aa22.61■■□□□ 1.21
PACSIN3-210ENST00000533686 OVOS2A0A0J9YW53 1432 aa22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 PER1O15534 1290 aaPredicted RBP22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 ADAMTS2O95450 1211 aa22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 MEX3CQ5U5Q3 659 aaKnown RBP22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 KCNH5Q8NCM2 988 aa22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 KNSTRNQ9Y448 316 aa22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 SLIT3O75094 1523 aa22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 CRYBG1Q9Y4K1 1723 aa22.6■■□□□ 1.21
PACSIN3-210ENST00000533686 COG3Q96JB2 828 aa22.59■■□□□ 1.21
PACSIN3-210ENST00000533686 USP54Q70EL1 1684 aa22.58■■□□□ 1.21
PACSIN3-210ENST00000533686 ZNF316A6NFI3 1004 aaPredicted RBP22.58■■□□□ 1.21
PACSIN3-210ENST00000533686 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
PACSIN3-210ENST00000533686 GGNBP2Q9H3C7 697 aa22.57■■□□□ 1.2
PACSIN3-210ENST00000533686 PHRF1Q9P1Y6 1649 aaKnown RBP22.57■■□□□ 1.2
PACSIN3-210ENST00000533686 CPDO75976 1380 aa22.56■■□□□ 1.2
PACSIN3-210ENST00000533686 NSD2O96028 1365 aa22.55■■□□□ 1.2
PACSIN3-210ENST00000533686 MARF1Q9Y4F3 1742 aaKnown RBP22.54■■□□□ 1.2
PACSIN3-210ENST00000533686 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
PACSIN3-210ENST00000533686 C8orf37Q96NL8 207 aa22.54■■□□□ 1.2
PACSIN3-210ENST00000533686 FAM83GA6ND36 823 aa22.53■■□□□ 1.2
PACSIN3-210ENST00000533686 ZC3H6P61129 1189 aaKnown RBP22.53■■□□□ 1.2
PACSIN3-210ENST00000533686 NGLY1Q96IV0 654 aa22.53■■□□□ 1.2
PACSIN3-210ENST00000533686 KIAA0232Q92628 1395 aa22.52■■□□□ 1.2
PACSIN3-210ENST00000533686 FNBP4Q8N3X1 1017 aaPredicted RBP22.52■■□□□ 1.2
PACSIN3-210ENST00000533686 PRDM11Q9NQV5 511 aa22.52■■□□□ 1.2
PACSIN3-210ENST00000533686 NPC1L1Q9UHC9 1359 aa22.51■■□□□ 1.19
PACSIN3-210ENST00000533686 ARHGEF25Q86VW2 580 aa22.51■■□□□ 1.19
PACSIN3-210ENST00000533686 KIF20BQ96Q89 1820 aa22.51■■□□□ 1.19
PACSIN3-210ENST00000533686 NFAT5O94916 1531 aa22.51■■□□□ 1.19
PACSIN3-210ENST00000533686 SOX12O15370 315 aa22.49■■□□□ 1.19
PACSIN3-210ENST00000533686 DDX10Q13206 875 aaKnown RBP22.49■■□□□ 1.19
PACSIN3-210ENST00000533686 SLIT2O94813 1529 aa22.48■■□□□ 1.19
PACSIN3-210ENST00000533686 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
PACSIN3-210ENST00000533686 AFF2P51816 1311 aa22.48■■□□□ 1.19
PACSIN3-210ENST00000533686 AATKQ6ZMQ8 1374 aa22.47■■□□□ 1.19
PACSIN3-210ENST00000533686 COL14A1Q05707 1796 aaKnown RBP22.46■■□□□ 1.19
PACSIN3-210ENST00000533686 CHRNA2Q15822 529 aa22.46■■□□□ 1.19
PACSIN3-210ENST00000533686 ZNF772Q68DY9 489 aaPredicted RBP22.46■■□□□ 1.19
PACSIN3-210ENST00000533686 MORC1Q86VD1 984 aa22.45■■□□□ 1.18
PACSIN3-210ENST00000533686 RGS17Q9UGC6 210 aaPredicted RBP22.45■■□□□ 1.18
PACSIN3-210ENST00000533686 USP21Q9UK80 565 aa22.45■■□□□ 1.18
PACSIN3-210ENST00000533686 UNC5CLQ8IV45 518 aa22.44■■□□□ 1.18
PACSIN3-210ENST00000533686 BTG4Q9NY30 223 aa22.44■■□□□ 1.18
PACSIN3-210ENST00000533686 BCL9LQ86UU0 1499 aa22.43■■□□□ 1.18
PACSIN3-210ENST00000533686 FBLN1P23142 703 aa22.43■■□□□ 1.18
PACSIN3-210ENST00000533686 ANKRD26Q9UPS8 1709 aa22.43■■□□□ 1.18
PACSIN3-210ENST00000533686 MAP3K19Q56UN5 1328 aa22.42■■□□□ 1.18
PACSIN3-210ENST00000533686 ZBTB7CA1YPR0 619 aa22.42■■□□□ 1.18
PACSIN3-210ENST00000533686 CC2D1BQ5T0F9 858 aaKnown RBP22.42■■□□□ 1.18
PACSIN3-210ENST00000533686 ABCC6O95255 1503 aa22.41■■□□□ 1.18
PACSIN3-210ENST00000533686 NWD2Q9ULI1 1742 aa22.4■■□□□ 1.18
PACSIN3-210ENST00000533686 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
PACSIN3-210ENST00000533686 LMO7Q8WWI1 1683 aa22.4■■□□□ 1.18
PACSIN3-210ENST00000533686 RRS1Q15050 365 aaKnown RBP22.4■■□□□ 1.18
PACSIN3-210ENST00000533686 IP6K1Q92551 441 aa22.4■■□□□ 1.18
PACSIN3-210ENST00000533686 TRPC5Q9UL62 973 aaPredicted RBP22.39■■□□□ 1.17
PACSIN3-210ENST00000533686 AXIN2Q9Y2T1 843 aa22.39■■□□□ 1.17
PACSIN3-210ENST00000533686 PLCH1Q4KWH8 1693 aa22.39■■□□□ 1.17
PACSIN3-210ENST00000533686 CAMTA1Q9Y6Y1 1673 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms