RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 PTPRUQ92729 1446 aa37.27■■■■□ 3.56
SAMD1-202ENST00000533683 CDC42BPGQ6DT37 1551 aa37.27■■■■□ 3.56
SAMD1-202ENST00000533683 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.26■■■■□ 3.56
SAMD1-202ENST00000533683 PRR36Q9H6K5 1346 aa37.25■■■■□ 3.55
SAMD1-202ENST00000533683 PNPLA6Q8IY17 1366 aa37.25■■■■□ 3.55
SAMD1-202ENST00000533683 ADGRB2O60241 1585 aa37.24■■■■□ 3.55
SAMD1-202ENST00000533683 U2SURPO15042 1029 aaKnown RBP37.22■■■■□ 3.55
SAMD1-202ENST00000533683 CCDC27Q2M243 656 aa37.22■■■■□ 3.55
SAMD1-202ENST00000533683 CRBNQ96SW2 442 aa37.22■■■■□ 3.55
SAMD1-202ENST00000533683 C20orf194Q5TEA3 1177 aa37.21■■■■□ 3.55
SAMD1-202ENST00000533683 TBX22Q9Y458 520 aa37.21■■■■□ 3.55
SAMD1-202ENST00000533683 NCBP3Q53F19 620 aaKnown RBP37.21■■■■□ 3.55
SAMD1-202ENST00000533683 MON2Q7Z3U7 1717 aa37.21■■■■□ 3.55
SAMD1-202ENST00000533683 NME9Q86XW9 330 aa37.18■■■■□ 3.54
SAMD1-202ENST00000533683 WDR63Q8IWG1 891 aa37.18■■■■□ 3.54
SAMD1-202ENST00000533683 AKAP12Q02952 1782 aa37.18■■■■□ 3.54
SAMD1-202ENST00000533683 DIAPH1O60610 1272 aaKnown RBP37.18■■■■□ 3.54
SAMD1-202ENST00000533683 PLEKHF1Q96S99 279 aa37.18■■■■□ 3.54
SAMD1-202ENST00000533683 FBLN1P23142 703 aa37.17■■■■□ 3.54
SAMD1-202ENST00000533683 POLKQ9UBT6 870 aa37.17■■■■□ 3.54
SAMD1-202ENST00000533683 AMOTL2Q9Y2J4 779 aa37.17■■■■□ 3.54
SAMD1-202ENST00000533683 ITSN1Q15811 1721 aa37.16■■■■□ 3.54
SAMD1-202ENST00000533683 GOLGA6L2Q8N9W4 650 aaPredicted RBP37.15■■■■□ 3.54
SAMD1-202ENST00000533683 ZNF692Q9BU19 519 aaPredicted RBP37.14■■■■□ 3.54
SAMD1-202ENST00000533683 MAP2P11137 1827 aaKnown RBP37.13■■■■□ 3.53
SAMD1-202ENST00000533683 ZRANB1Q9UGI0 708 aa37.12■■■■□ 3.53
SAMD1-202ENST00000533683 DIP2AQ14689 1571 aa37.11■■■■□ 3.53
SAMD1-202ENST00000533683 RIMS1Q86UR5 1692 aaKnown RBP37.1■■■■□ 3.53
SAMD1-202ENST00000533683 CEP170BQ9Y4F5 1589 aaPredicted RBP37.1■■■■□ 3.53
SAMD1-202ENST00000533683 PPM1GO15355 546 aaPredicted RBP37.1■■■■□ 3.53
SAMD1-202ENST00000533683 BCAR3O75815 825 aa37.1■■■■□ 3.53
SAMD1-202ENST00000533683 TOPAZ1Q8N9V7 1692 aa37.09■■■■□ 3.53
SAMD1-202ENST00000533683 PTCH1Q13635 1447 aa37.09■■■■□ 3.53
SAMD1-202ENST00000533683 COG3Q96JB2 828 aa37.07■■■■□ 3.52
SAMD1-202ENST00000533683 NUTM2FA1L443 756 aa37.06■■■■□ 3.52
SAMD1-202ENST00000533683 AATKQ6ZMQ8 1374 aa37.06■■■■□ 3.52
SAMD1-202ENST00000533683 TMPOP42166 694 aaKnown RBP37.05■■■■□ 3.52
SAMD1-202ENST00000533683 MAPK8IP3Q9UPT6 1336 aa37.05■■■■□ 3.52
SAMD1-202ENST00000533683 PLEKHG3A1L390 1219 aa37.05■■■■□ 3.52
SAMD1-202ENST00000533683 EMILIN1Q9Y6C2 1016 aa37.05■■■■□ 3.52
SAMD1-202ENST00000533683 ACEP12821 1306 aa37.03■■■■□ 3.52
SAMD1-202ENST00000533683 PNNQ9H307 717 aaKnown RBP37.01■■■■□ 3.52
SAMD1-202ENST00000533683 FCHSD2O94868 740 aa37■■■■□ 3.51
SAMD1-202ENST00000533683 XRN1Q8IZH2 1706 aaKnown RBP37■■■■□ 3.51
SAMD1-202ENST00000533683 NRKQ7Z2Y5 1582 aa37■■■■□ 3.51
SAMD1-202ENST00000533683 TRIM35Q9UPQ4 493 aa37■■■■□ 3.51
SAMD1-202ENST00000533683 CDK12Q9NYV4 1490 aaPredicted RBP36.99■■■■□ 3.51
SAMD1-202ENST00000533683 MYH16Q9H6N6 1097 aa36.98■■■■□ 3.51
SAMD1-202ENST00000533683 TTC21BQ7Z4L5 1316 aa36.98■■■■□ 3.51
SAMD1-202ENST00000533683 LRRC7Q96NW7 1537 aa36.96■■■■□ 3.51
SAMD1-202ENST00000533683 RSPH6AQ9H0K4 717 aa36.95■■■■□ 3.51
SAMD1-202ENST00000533683 USP6P35125 1406 aa36.95■■■■□ 3.51
SAMD1-202ENST00000533683 ADAMTSL3P82987 1691 aa36.94■■■■□ 3.5
SAMD1-202ENST00000533683 RRS1Q15050 365 aaKnown RBP36.94■■■■□ 3.5
SAMD1-202ENST00000533683 IL13P35225 146 aa36.93■■■■□ 3.5
SAMD1-202ENST00000533683 RARSP54136 660 aaKnown RBP36.93■■■■□ 3.5
SAMD1-202ENST00000533683 RIPK4P57078 832 aa36.93■■■■□ 3.5
SAMD1-202ENST00000533683 PIK3R4Q99570 1358 aa36.92■■■■□ 3.5
SAMD1-202ENST00000533683 KCNA6P17658 529 aa36.91■■■■□ 3.5
SAMD1-202ENST00000533683 PRKAR2BP31323 418 aa36.91■■■■□ 3.5
SAMD1-202ENST00000533683 ZNF142P52746 1687 aaPredicted RBP36.88■■■■□ 3.5
SAMD1-202ENST00000533683 OVOS2A0A0J9YW53 1432 aa36.87■■■■□ 3.49
SAMD1-202ENST00000533683 PDE3AQ14432 1141 aa36.87■■■■□ 3.49
SAMD1-202ENST00000533683 OVOS2Q6IE36 1432 aa36.87■■■■□ 3.49
SAMD1-202ENST00000533683 SSH2Q76I76 1423 aa36.87■■■■□ 3.49
SAMD1-202ENST00000533683 HMOX1P09601 288 aa36.87■■■■□ 3.49
SAMD1-202ENST00000533683 ANKLE2Q86XL3 938 aa36.87■■■■□ 3.49
SAMD1-202ENST00000533683 FANCIQ9NVI1 1328 aa36.86■■■■□ 3.49
SAMD1-202ENST00000533683 RGPD8O14715 1765 aaPredicted RBP36.86■■■■□ 3.49
SAMD1-202ENST00000533683 IL16Q14005 1332 aa36.86■■■■□ 3.49
SAMD1-202ENST00000533683 PMFBP1Q8TBY8 1022 aa36.85■■■■□ 3.49
SAMD1-202ENST00000533683 TSR2Q969E8 191 aaKnown RBP36.85■■■■□ 3.49
SAMD1-202ENST00000533683 NEFMP07197 916 aa36.83■■■■□ 3.49
SAMD1-202ENST00000533683 CANXP27824 592 aaKnown RBP36.83■■■■□ 3.49
SAMD1-202ENST00000533683 KDM2BQ8NHM5 1336 aa36.82■■■■□ 3.49
SAMD1-202ENST00000533683 PHACTR3Q96KR7 559 aa36.82■■■■□ 3.48
SAMD1-202ENST00000533683 SETD1BQ9UPS6 1966 aaKnown RBP36.81■■■■□ 3.48
SAMD1-202ENST00000533683 FRAT1Q92837 279 aaPredicted RBP36.8■■■■□ 3.48
SAMD1-202ENST00000533683 NALCNQ8IZF0 1738 aa36.79■■■■□ 3.48
SAMD1-202ENST00000533683 CT47B1P0C2W7 299 aaPredicted RBP36.78■■■■□ 3.48
SAMD1-202ENST00000533683 TCERG1O14776 1098 aaKnown RBP36.78■■■■□ 3.48
SAMD1-202ENST00000533683 NGDNQ8NEJ9 315 aaKnown RBP36.78■■■■□ 3.48
SAMD1-202ENST00000533683 TTC21AQ8NDW8 1320 aa36.78■■■■□ 3.48
SAMD1-202ENST00000533683 NFE2L2Q16236 605 aa36.77■■■■□ 3.48
SAMD1-202ENST00000533683 PANK1Q8TE04 598 aa36.77■■■■□ 3.48
SAMD1-202ENST00000533683 BCL2L13Q9BXK5 485 aa36.77■■■■□ 3.48
SAMD1-202ENST00000533683 USP31Q70CQ4 1352 aa36.77■■■■□ 3.48
SAMD1-202ENST00000533683 EXOSC9Q06265 439 aaKnown RBP36.77■■■■□ 3.48
SAMD1-202ENST00000533683 ANKARQ7Z5J8 1434 aa36.76■■■■□ 3.48
SAMD1-202ENST00000533683 CHD2O14647 1828 aaKnown RBP36.76■■■■□ 3.48
SAMD1-202ENST00000533683 DNAJC5Q9H3Z4 198 aa36.76■■■■□ 3.47
SAMD1-202ENST00000533683 CENPQQ7L2Z9 268 aaPredicted RBP36.75■■■■□ 3.47
SAMD1-202ENST00000533683 FMN2Q9NZ56 1722 aa36.73■■■■□ 3.47
SAMD1-202ENST00000533683 COG6Q9Y2V7 657 aa36.72■■■■□ 3.47
SAMD1-202ENST00000533683 EIF4A2Q14240 407 aaKnown RBP36.7■■■■□ 3.47
SAMD1-202ENST00000533683 PEAK1Q9H792 1746 aa36.69■■■■□ 3.46
SAMD1-202ENST00000533683 TNNQ9UQP3 1299 aa36.67■■■■□ 3.46
SAMD1-202ENST00000533683 SKAP1Q86WV1 359 aa36.67■■■■□ 3.46
SAMD1-202ENST00000533683 RLBP1P12271 317 aa36.66■■■■□ 3.46
SAMD1-202ENST00000533683 MS4A1P11836 297 aa36.66■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms